BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg908529

Length=426
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT1G69510.1 | Symbols:  | cAMP-regulated phosphoprotein 19-rela...   604    2e-172


> AT1G69510.1 | Symbols:  | cAMP-regulated phosphoprotein 19-related 
protein | chr1:26126350-26127961 FORWARD LENGTH=780
Length=780

 Score =  604 bits (327),  Expect = 2e-172
 Identities = 369/390 (95%), Gaps = 0/390 (0%)
 Strand=Plus/Plus

Query  1    ATGGAAGACGTGAAGGGGAAGGAGATTATTGATGATGCTCCTATTGACAACAAGGTTTCA  60
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct  131  ATGGAAGACGTGAAAGGGAAGGAGATTATTGATGATGCTCCTATTGACAACAAGGTTTCA  190

Query  61   GATGAAATAGAGAGTGAGGAAAATGCGATTAAGAAAAAGTATGGAGGATTGTTGCCAAAG  120
            |||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct  191  GATGAAATGGAGAGTGAGGAAAATGCGATCAAGAAAAAGTATGGAGGATTGTTGCCTAAG  250

Query  121  AAGATTCCATTGATATCTAAGGACCATGAACGCGCGTTTTTTGACTCTGCTGATTGGGCT  180
            |||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct  251  AAGATTCCTTTGATATCTAAGGACCATGAACGTGCGTTTTTTGACTCAGCTGATTGGGCT  310

Query  181  TTAGGCAAGCAAAAAGGACAGAAACCCAAAGGACCTTTGGAAGCTCTCCGCCCAAAACTG  240
            ||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||
Sbjct  311  TTAGGCAAGCAAAAAGGACAGAAGCCGAAAGGGCCTTTGGAAGCTCTCCGCCCAAAACTG  370

Query  241  CAGCCAACCCCGCACCAGCAACCAAGAGCAAGACGAATGGCTTATTCTTCAGGCGATACT  300
            |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct  371  CAGCCAACCCCGCAACAGCAACCAAGAGCAAGACGAATGGCTTATTCTTCAGGCGAAACT  430

Query  301  GAAGACTCTGAGACTGATAACAACGAATCTCCCGATGACCAAGCCTGCGCATCAGCTGTT  360
            |||||| |||||| ||||||||||||| |||| |||||||||||||||||||||||||| 
Sbjct  431  GAAGACACTGAGATTGATAACAACGAAGCTCCGGATGACCAAGCCTGCGCATCAGCTGTG  490

Query  361  GACAATACAAATTTAAAGGAAGATGGAGGC  390
            || | ||| ||||||||||| |||||||||
Sbjct  491  GATAGTACCAATTTAAAGGACGATGGAGGC  520



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 20207635098


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5