BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg908599 Length=1179 Score E Sequences producing significant alignments: (Bits) Value AT1G70150.1 | Symbols: | zinc ion binding | chr1:26416898-2641... 1225 0.0 > AT1G70150.1 | Symbols: | zinc ion binding | chr1:26416898-26419588 FORWARD LENGTH=1192 Length=1192 Score = 1225 bits (663), Expect = 0.0 Identities = 943/1070 (88%), Gaps = 52/1070 (5%) Strand=Plus/Plus Query 1 ATGGAGTGTGCCGCGCGTGGGTTTGCAACGCGGTGCGTTGGTCCACCGACGCGGAGGTGT 60 |||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||| Sbjct 1 ATGGAGTGTGCCGCGCGTGGTTTTGCGACGCGGTGTGTTGGTCCACCGACGCGGAGGTGT 60 Query 61 GGCCAGTGTGGTGCTGTAGCTTATTGCTCCGTCTCTCATCAGATTTCACATTGGAGCTAT 120 || |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 61 GGTCAGTGTGGTGCTGTAGCTTATTGCTCCGTCTCTCATCAGATTTCGCATTGGAGCTAT 120 Query 121 CACAAGGAAGAATGTGAGAGATTAGAAGAGCAAATGCGTCGTGTTGATCTGTTAAATGAT 180 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 121 CACAAGGAAGAATGTGAGAGATTAGAAGAGCAAATGCGTCGTGTTGATCTTTTAAATGAT 180 Query 181 TTTCCATTTACATTTACAGAAGAAGCTACGGTTCAGGTTAGTCAAAAACATGAGACTAGG 240 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 181 TTTCCATTTACATTTACAGAAGAAGCTACAATTCAGGTTAGTCAAAAACATGAGACTAGG 240 Query 241 TGCTCGTTTC-TCTGT-AA-ACGGGAGTTACATCGTGTTGGAATGTGGATGTATGAATGT 297 |||||| ||| || | || | |||| ||||||||||||||||||||||||||||| ||| Sbjct 241 TGCTCG-TTCTTC-ATCAAGAGGGGA-TTACATCGTGTTGGAATGTGGATGTATGAGTGT 297 Query 298 AACTGTGGAGCTTCTGCCGGTTTTTCGGCTTTCGATAGTTTTAATAATGACGGTTGGCAT 357 ||||||||| | | ||| |||||| ||||||||||||| ||| || |||||| Sbjct 298 AACTGTGGA------G-C----TTT-GGCTTTTGATAGTTTTAATATTGAAGGGTGGCAT 345 Query 358 CTT-CCGAGCTCTTCTTGTCCATGTCGCGGTCCTTTATCTCCAGTTACAAAACTGCTATG 416 || ||||||||||||||||||||||| || |||||||||||| | || |||| |||||| Sbjct 346 -TTGCCGAGCTCTTCTTGTCCATGTCGTGGGCCTTTATCTCCAATAACTAAACAGCTATG 404 Query 417 TAGTTGGACTGATTATTTCGAATGGAGAAAGATACCTCTTGATTCTCCTGTGGCTCTACT 476 || ||||| ||||||||||| ||||||||| ||||||| ||||| ||||| |||||||| Sbjct 405 TACTTGGAAGGATTATTTCGAGTGGAGAAAGTTACCTCTAGATTCACCTGTAGCTCTACT 464 Query 477 TCTCCACTGGAGCTTGCTGTTATTTCAGCCACTTACGATATATCATGCAATTCAAGCCAT 536 ||| | | | ||| |||||||||||||||||||||| |||||||||| Sbjct 465 TCT-C-C---A-----CTG--------GCCACTTACGATATATCATGCAGTTCAAGCCAT 506 Query 537 TGGGTTGGGAAATTTAACTCCCCAAATAAGTAATGAACTTCGTATACATTATCTTGGCCC 596 |||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||| || Sbjct 507 TGGGATGGGAAATTTGACTCCCCAAATAAGTGATGAACTTCGTATACATTATCTTGGGCC 566 Query 597 TCAGAAAGAGCTTGGCCAACTTGGTGTCTTCACTGAGCTGCAAGCCCTCTTCCCTGGTCT 656 |||||| || ||||| ||||||||||| || ||||||||||||| |||||||||||||| Sbjct 567 TCAGAAGGAACTTGGGCAACTTGGTGTTTTTGCTGAGCTGCAAGCGCTCTTCCCTGGTCT 626 Query 657 GCGCATACACGTAGAGCTTG-TTGGACCTGACGTTCCACAACATATGGATGGAGAGATGA 715 |||||| | ||||| ||| |||||||||||||||||||||||||||||||||| |||| Sbjct 627 GCGCATTTATGTAGA-TTTGATTGGACCTGACGTTCCACAACATATGGATGGAGAAATGA 685 Query 716 TCTCACTTAGCAGATATTCCCCTTGCAT-GGAAGAAGAATGCGAATGTAATTATTCAAGT 774 |||| ||| ||||||||||||||||||| |||| ||||||| |||||||| ||||||| Sbjct 686 TCTCCCTTTGCAGATATTCCCCTTGCATGGGAA-AAGAATGTGAATGTAAAAATTCAAGC 744 Query 775 GAAA---T---TTCCGGTAGCGAATCTGC-CTGGTCTTCAGCTGTGTCGTTACAGCTCCA 827 ||| | |||||| ||| || |||| |||| ||| |||||||| |||||||||| Sbjct 745 AAAATTCTCAATTCCGGGAGCAAACCTGCTTTGGT-TTCGGCTGTGTCATTACAGCTCCG 803 Query 828 TAGAGGGTTTTACCATGATCTTTACACCGACATAACAAAGAATTCACCTCCTCCTCACAT 887 |||||||||||||||||||| ||||| |||||||||||| ||||| |||||| ||||| Sbjct 804 TAGAGGGTTTTACCATGATCGTTACAATGACATAACAAAGGATTCATTTCCTCCACACAT 863 Query 888 AGTGATTGCTCCAAACGCCGGCGTCGCAGCATATCCAAGTTGGTTGCCAACTATTGAACT 947 |||||||||||||||||| ||| |||| ||||||||||| |||||||||||||||||||| Sbjct 864 AGTGATTGCTCCAAACGCAGGCATCGCTGCATATCCAAGCTGGTTGCCAACTATTGAACT 923 Query 948 GATAAAGGAGATA-AGAGTGCCAGCAGTATTCTCTGATTACTGTGAAGAAGCTTGTCATC 1006 ||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||| Sbjct 924 GATAAAGGAGATACA-AGTCCCAGCAGTATTCTCTGATTACTGTGAAGAAGCTTGTCATC 982 Query 1007 TGGCGGCTTGTTGCATTAAAACCATCACAGGACAACCTATATCATTACCT 1056 |||| ||||||||||||||||||||||||||||||||| |||||| |||| Sbjct 983 TGGCTGCTTGTTGCATTAAAACCATCACAGGACAACCTCTATCATCACCT 1032 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 57881228385 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5