BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg908619 Length=1530 Score E Sequences producing significant alignments: (Bits) Value AT1G70340.1 | Symbols: | Plant protein of unknown function (DU... 2279 0.0 > AT1G70340.1 | Symbols: | Plant protein of unknown function (DUF936) | chr1:26503961-26506613 REVERSE LENGTH=2363 Length=2363 Score = 2279 bits (1234), Expect = 0.0 Identities = 1443/1542 (94%), Gaps = 21/1542 (1%) Strand=Plus/Plus Query 1 ATGGCAGCTTTAGCACCTGGAATTCTTCAAAAGCTAATCCAAGGTATGAAAACAGGAATC 60 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 225 ATGGCAGCTTTGGCACCTGGAATTCTTCAAAAGCTAATCCAAGGTATGAAAACAGGAATT 284 Query 61 AAACCAACTAGAGAGCACCGGAGCTCTATGTTACAGGTCACAGATATCGTCCCCATAGGT 120 |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| | | Sbjct 285 AAACCAACTAGAGAGCACCGAAGCTCTATGTTACAGGTCACAGATATCGTTCCCATTGAT 344 Query 121 CTCGACGAGAAGTCTCTGGAGCCGAAACAAGGGTTTCTCATCAAAGTCTCTGATTCCTCT 180 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 345 CTCGACGAGAAGTCTCTGGAGCCGAAACAAGGGTTTCTCATCAAAATCTCTGATTCCTCT 404 Query 181 CACTCAATCTATGTCTCACTTCCTTCAGACCAAGACGACGTCGTTCTCAGCAATAAGATG 240 ||||| ||||| ||||| || ||||| || ||||||||||||||||||||||||||| || Sbjct 405 CACTCGATCTACGTCTCTCTCCCTTCGGATCAAGACGACGTCGTTCTCAGCAATAAGTTG 464 Query 241 CAGCTT-GGTCAGTTTATCTACGTCGATCGGCTCGAACCTGGATCCCCTGTTCCTGTCAT 299 ||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 465 CAG-TTGGGTCAGTTTATCTACGTTGATCGGCTCGAACCTGGATCCCCTGTTCCTGTCAT 523 Query 300 TAAAGGCGCAAAACCAATCCCTGGTCGGCACCCAC-TGCTTGGGACGCCGGAGCCATTGA 358 |||||| |||||||| || ||||| |||||||| | ||||||||||||||||| ||||| Sbjct 524 TAAAGGGGCAAAACCCATACCTGGCCGGCACCC-CTTGCTTGGGACGCCGGAGACATTGG 582 Query 359 TGGGTCCGAAAGGAAGATCTGATCAAGAGATTGGGTCGAAGCCTAGAAGAGGATCTTGGG 418 ||| |||||||| |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 583 TGGTTCCGAAAGAAAGAACTGATCAAGAGATTGGGTCGAAGCCTAGAAGAGGATCTTGGG 642 Query 419 GACAAAACGTCGACGTTTCTTCGTCTCCGTTTGTTGTGAAACCAATGCCGTTGGATTTTG 478 |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||| Sbjct 643 GACAAAACGTCGACTTTTCTTCGTCTCCGTTTGTTGTGAAACCAATGGCGTTGGAGTTTG 702 Query 479 ATCATTCCACACCGGTGAAGAGGTCTGTTTCAGCTAGATTCGCAGCGTCTCCGATCAGAA 538 | |||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||| Sbjct 703 ACCATTCCACGCCGGCGAAGAGGTCTGTTTCAGCTAGATTTGCAGCGTCTCCGATCAGAA 762 Query 539 GAGGTGGAGTGAGATGCTCTTTTGGTGGAGGGGTTTTGGGGAAAATGGAAGGAGAGAGTC 598 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 763 GAGGTGGAGTGAGATGCTCTTTTGGTGGAGGGGTTTTGGGGAAATTGGAAGGAGAGAGTC 822 Query 599 CGGCGACGGCGATGCTGAGGAAGAGTTGTTTTGTTTCGTCGGCTTCGAAGTTTCCGAGAA 658 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 823 CGGCGACGGCGATGCTAAGGAAGAGTTGTTTTGTTTCGTCGGCTTCGAAGTTTCCGAGAA 882 Query 659 GTAGAAGTGTTTGTGACAGAGAGGCTAAAAGGAACAATGCTTCTCTTTTTAGTCCCTTCA 718 |||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||| Sbjct 883 GTAGAAGTGTTTGTGACAGACAGGCCAAAAAGAACAATGCTTCTCTTTTTAGTCCCTTCA 942 Query 719 AATTCTCTCTAGAGGCTCAAGAAGATGTTGTCCCCTTGTCTACCTCGAAAACTAAGACGA 778 ||| ||||||||||||||||||||||||||| ||||||||||||||| |||| || Sbjct 943 AATCCTCTCTAGAGGCTCAAGAAGATGTTGTTCCCTTGTCTACCTCG------AAGAAGA 996 Query 779 GAAAACCCGAGAAAGATACCAATTTACCAGGAAGGCTCAACACACTAAGCAAGGAAGCAA 838 ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| Sbjct 997 TAAAACCCGAGAAAGATACCAATTTATCAGGAAGGCTCAACATACTAAGCAAGGAAGCAA 1056 Query 839 CTCAGCTTCGAGAGGCAGCTCAGAAGGTTGCCCTTCAGGCATTGCGAGAAGCTACAATCA 898 |||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1057 CTCAGCTTCGGGAGGTAGCTCAGAAAGTTGCCCTTCAGGCATTGCGAGAAGCTACAATCA 1116 Query 899 CGGAAACTGTCGTTCGTCAT-CTCAAGACGTTCACCAATCTGAATAAATCAGCAAAAGCT 957 |||||| ||| ||||||||| | |||||||||||||||||||| |||||||||||||||| Sbjct 1117 CGGAAATTGTTGTTCGTCATAC-CAAGACGTTCACCAATCTGAGTAAATCAGCAAAAGCT 1175 Query 958 GATTGCCCTGGGGTGTGCTTTGAGAAGTTCATGGAGTTTCACCAGCAGATGGCACAAACC 1017 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1176 GATTGCCCTGCGGTGTGCTTTGAGAAGTTCATGGAGTTTCACCAGCAGATGGCACAAACC 1235 Query 1018 ATTGGCGAACTCGCTTCCATTGAAGCAGCTGCT--T-TAGATGCTGAGAACAAGTCACAG 1074 |||||||||||| |||||||||||| ||||||| | |||||||||||||||||||||| Sbjct 1236 ATTGGCGAACTCACTTCCATTGAAGTAGCTGCTACTCCAGATGCTGAGAACAAGTCACAG 1295 Query 1075 AACATAAACACAAGAACCGAAAATCAGAAACCAAGAGAAGAAGAGCCTTCTTCGATCCTG 1134 ||||||||| |||||||||||||||||||||||| |||||||| | |||||||||||||| Sbjct 1296 AACATAAACGCAAGAACCGAAAATCAGAAACCAACAGAAGAAGGGTCTTCTTCGATCCTG 1355 Query 1135 CATGAAATCGCTTATAATTCTATTGATCAGGAGAAAAGGAGATCAAAGAGGCGGATTGTC 1194 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1356 CATGAAATCGCTTATAATTCTATTGATCAGGAGAAAAGGAGATCAAAGAGACGGATTGTC 1415 Query 1195 CTGAAGCAGCA-AG--AAGGGAAGACATTGAGATCAAATGATGAGAACAAGAACCCAGTT 1251 ||||||||||| || ||||||||||| |||||||||||||||||||||||||||||| | Sbjct 1416 CTGAAGCAGCAGAGCGAAGGGAAGACAGTGAGATCAAATGATGAGAACAAGAACCCAGCT 1475 Query 1252 TGTGGCGAAATAGGCAACACGATTAGGTTGGCTAAGGAGATCGAGGAAGAAGCTGCAAAC 1311 | ||||| ||| |||||||||||||||| || |||||||||||||| |||||||||||| Sbjct 1476 TCTGGCGGTATAAGCAACACGATTAGGTTAGCAAAGGAGATCGAGGATGAAGCTGCAAAC 1535 Query 1312 TGGTTCATGGAGTTCGTCGAAATGGCTCTAGAGAAAGGTATGAAGAAATCTAGAGGCCCT 1371 ||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||||| Sbjct 1536 TGGTTCATGGAGTTCATCGAAATAGCTCTGGAGAAAGGTATGAAGAAATCTAGAGGCCCT 1595 Query 1372 GATGATGCAGACGTTAAGAAAGTTCCGCAATCTCTGATTCTCGGGGTTTTGAACTGGATT 1431 |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct 1596 GATGATGCAGACGTTAAGAAGGTTCCGCAATCTCTGATTCTCGGGGTTTTAAACTGGATT 1655 Query 1432 GAAGTTGAACAGTCTAATAGCAACAACAA---GAGACGTACAGTCCATCCAAAAACATCA 1488 ||||| ||||||||| ||||||||||||| |||||| | ||||||||||||| ||||| Sbjct 1656 GAAGTCGAACAGTCTGATAGCAACAACAACAAGAGACGCAGAGTCCATCCAAAAGCATCA 1715 Query 1489 AAGATCACTCGAAAGCTCAGAATTAAATTGAAGAATCCTTGA 1530 ||||||||| ||||||||||||||||| |||||||||||||| Sbjct 1716 AAGATCACTAGAAAGCTCAGAATTAAACTGAAGAATCCTTGA 1757 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 75501619680 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5