BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg908871
Length=996
Score E
Sequences producing significant alignments: (Bits) Value
AT1G72620.1 | Symbols: | alpha/beta-Hydrolases superfamily pro... 1480 0.0
AT1G17430.1 | Symbols: | alpha/beta-Hydrolases superfamily pro... 660 0.0
> AT1G72620.1 | Symbols: | alpha/beta-Hydrolases superfamily protein
| chr1:27341079-27342455 FORWARD LENGTH=1062
Length=1062
Score = 1480 bits (801), Expect = 0.0
Identities = 944/1011 (93%), Gaps = 18/1011 (2%)
Strand=Plus/Plus
Query 1 ATGGCGTCAATGAAACTCGTT-GTTCATATTCTCCGTCGATACATCTCCATCGCAATAAC 59
|||| |||||||||| | || ||||||||||||||||||||||||||||| ||||| ||
Sbjct 1 ATGGTGTCAATGAAAAGC-TTCGTTCATATTCTCCGTCGATACATCTCCATTGCAATCAC 59
Query 60 TCTCTTCTATAGCCTCATTTGGTGTTTATTCGACAATTTCGATTACCCGATCCTAATCAA 119
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 60 TCTCTTCTATAACCTCATTTGGTGTTTATTCGACAATTTCGATTACCCGATCCTAATCAA 119
Query 120 ACTCGCTGATACGTTCTTATCTTTATATTTCCTAATCTTCTGCGATCTCCGTCCAGTAAC 179
||||||||||| |||||||| ||||||||||||||||||||||||||||||||| | ||
Sbjct 120 GCTCGCTGATACATTCTTATCATTATATTTCCTAATCTTCTGCGATCTCCGTCCAATCAC 179
Query 180 CGTCGATTTAAACGATGGAGAAACCACATTACATTTCTGGATCTCCGGCCACCGTAAAAC 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 180 CGTCGATTTAAACGATGGAGAAACCACATTACATTTCTGGATCTCCGGCCACCGTAAAAT 239
Query 240 CAACCGCCCAAACCTCCTCATGCTACACGGTTACGGAGGAAATTCGAAATGGCAATTTAT 299
||||||||| |||||| ||||| ||||||| ||||||||||||||||||||||| || ||
Sbjct 240 CAACCGCCCTAACCTCGTCATGTTACACGGCTACGGAGGAAATTCGAAATGGCAGTTCAT 299
Query 300 TCATCAAGTTTCAGATCTATCGAAATCGTTTAATCTCTTTATCCCCGATCTCATGTTCTT 359
||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct 300 TCATCAAGTCTCAGATCTATCGAAATCGTTTAATCTCTTTATCCCTGATCTTGTGTTCTT 359
Query 360 CGGGAAATCGTACTCGAAAAATACCGATCGGAGC-GTCGAGTTTCAGGCGAGGAGTATCG 418
||||||||||||||||| ||| |||||||||| | ||||||||||||||||||||||||
Sbjct 360 CGGGAAATCGTACTCGAGAAACACCGATCGGA-CTATCGAGTTTCAGGCGAGGAGTATCG 418
Query 419 TCGGAGGTTTGAAGAGGTTAGGCTGTGGTGACGGAGATTTGTCGGTTTACTCTATTAGTT 478
|||||||||||||||||||||| ||||||||||||||||| |||||||| || |||||||
Sbjct 419 TCGGAGGTTTGAAGAGGTTAGGTTGTGGTGACGGAGATTTATCGGTTTATTCAATTAGTT 478
Query 479 ACGGAGGATTCGTCGCGTATCGGATTGCGAAGATTTGGCCGGAGATGGTTGAGAAACTGG 538
|||| ||||| || ||||| ||||| ||||||||||||||||||||| |||||||| |||
Sbjct 479 ACGGTGGATTTGTTGCGTACCGGATAGCGAAGATTTGGCCGGAGATGATTGAGAAATTGG 538
Query 539 TGATTGTGAGTAGTGGAGTTGGGTTTACACAACAGCAAAAGATGACGGAGATGAAAAAAC 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 539 TGATTGTGAGTAGTGGAGTTGGGTTTACACAACAGCAAAAGATGACGGAGATGAAAAAAC 598
Query 599 ACGGCGGAGATGTATCGGAGATTCTTGTTCCGAGTAATCCGAGAGATCTCCGGTTGTTAG 658
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 599 ACGGCGGAGATGTATCGGAGATTCTTGTTCCGAGTAATCCGAGAGATCTACGGTTGTTAG 658
Query 659 TTAGGGTTTCGATGAATACAGGTATCAGGTTTCTTGACTGTGTTCCAGATTTCATCCTCT 718
||| |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct 659 TTAAGGTTTCGATGAATACAGGTATCAGATTTCTTGACTGGGTTCCAGATTTCATCCTCT 718
Query 719 CCCAATTCATCGCT---A---------CAAATCGGCAAGAACTTGTTGATTTAGCTAAGA 766
|||||||||||||| | ||||||||||||| |||||||||||||||||||
Sbjct 719 CCCAATTCATCGCTGTGATGTATGAGACAAATCGGCAAGAGCTTGTTGATTTAGCTAAGA 778
Query 767 ATTTGCTGGAAAGAGAAGAGGAGCCAGAttt-ttttGCAATATCACAGAAAACGTTAATC 825
|||||||||||||||||||||||||||| || |||| |||||||||||| ||||||||||
Sbjct 779 ATTTGCTGGAAAGAGAAGAGGAGCCAGAGTTATTTT-CAATATCACAGAGAACGTTAATC 837
Query 826 GTTTGGGGTGATAAGGATAATGTGTTTCCCTTGGAGCATGGACGGCGTCTTCAAAGGCAT 885
||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||
Sbjct 838 GTTTGGGGTGATAAGGATAATGTGTTTCCGTTGGAGCATGGACGTCGTCTACAAAGGCAT 897
Query 886 TTGCCAAATTCGAGTTTAGAGGTATTGAAGGAAATTGGACATGGTGTGAACATTGAAGCA 945
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 898 TTGCCGAATTCGAGTTTAGAGGTATTGAAGGAAATTGGACATGGTGTGAACATTGAAGCA 957
Query 946 CCAACTACTCTTAATAATTTGATTATCTCGTTTGTTTTAGGTGCTCCTTAA 996
|||||||||||||| |||||||||||||||||||||||||||| |||||||
Sbjct 958 CCAACTACTCTTAACAATTTGATTATCTCGTTTGTTTTAGGTGTTCCTTAA 1008
> AT1G17430.1 | Symbols: | alpha/beta-Hydrolases superfamily protein
| chr1:5982267-5984013 FORWARD LENGTH=1136
Length=1136
Score = 660 bits (357), Expect = 0.0
Identities = 743/925 (80%), Gaps = 44/925 (5%)
Strand=Plus/Plus
Query 97 TTCGATTACCCGATCCTAATCAAACTCGCTGATACGTTCTTATCTTTATATTTCCTAATC 156
||||||| ||||| || |||||| |||| ||| ||||||||||| | |||||| || |
Sbjct 128 TTCGATTTTCCGATACTGATCAAAATCGCAGATTCGTTCTTATCTCTGTATTTCTTAGTT 187
Query 157 TTCTGCGATCTCCGTCCAGTAACCGTCGATTTAAACGATGGAGAAACCACATTACATTTC 216
|||||||||||||| || |||||||||||| || |||| |||||||||||| | ||||||
Sbjct 188 TTCTGCGATCTCCGACCCGTAACCGTCGATCTAGACGACGGAGAAACCACAGTCCATTTC 247
Query 217 TGGATCTCCGGCCACCGTAAAACCAAC-CGCCCA-AACCTCCTCATGCTACACGGTTACG 274
||||||||||||||||||| || | | || || || ||| ||||||| || || ||||
Sbjct 248 TGGATCTCCGGCCACCGTAGAATC-TCTCG-GCAGAATCTCGTCATGCTCCATGGATACG 305
Query 275 GAGGAAATTCGAAATGGCAATTTATTCATCAAGTTTCAGATCTATCGAAATCGTTTAATC 334
||||||| || ||||||||||| |||||||||| || ||||| ||||||||||||||||
Sbjct 306 GAGGAAACTCCAAATGGCAATTCGTTCATCAAGTCTCGGATCTCTCGAAATCGTTTAATC 365
Query 335 TCTTTATCCCCGATCTCATGTTCTTCGGGAAATCGTACTCGAAAAATACCGATCGGAGCG 394
|||| ||||||||| | | |||||||| |||||||| ||||| |||| ||||||||||
Sbjct 366 TCTTCATCCCCGATTTGGTCTTCTTCGGAAAATCGTATTCGAAGAATAGAGATCGGAGCG 425
Query 395 TCGAGTTTCAGGCGAGGAGTATCGTCGGAGGTTTGAAGAGGTTAGGCTGTGGTG-A--CG 451
| ||| ||||||||||||| |||||||||| ||||||| | || || | || | |
Sbjct 426 TTGAGATTCAGGCGAGGAGCGTCGTCGGAGGATTGAAGAAACTGGGATGCGTTGAAGGAG 485
Query 452 GA-GA--TTTGTCGGTTTACTCTATTAGTTACGGAGGATTCGTCGCGTATCGGATTGCGA 508
|| || | ||| |||| || ||||||||||| ||||| || |||||| || |||
Sbjct 486 GAGGAGGAATATCGATTTATTCGATTAGTTACGGTGGATTTGTGGCGTATAAAATGGCGG 545
Query 509 AGATTTGGCCGGAGATGGTTGAGAAACTGGTGATTGTGAGTAGTGGAGTTGGG-TTTACA 567
|||||||||||| ||||||||||||| ||||||||||||||||||||| |||| ||||||
Sbjct 546 AGATTTGGCCGGCGATGGTTGAGAAATTGGTGATTGTGAGTAGTGGAG-TGGGATTTACA 604
Query 568 CAACAGCAAAAGATGACGGAGA-TGAAAAAACACGGCGGAGA-TGTATCGGAGATTCTT- 624
|| ||||| |||| | | || | ||||||||||||||||||| ||| ||| ||||| ||
Sbjct 605 CAGCAGCAGAAGACGGCAGA-ATTGAAAAAACACGGCGGAGATTGT-TCGAAGATT-TTA 661
Query 625 GTTCCGAGTAA-TCCGA-GAGATCTCCGGTTG-TTAGTTAGGGTTTCGATGAATACAGGT 681
||||||| || ||||| | ||||| |||||| | | ||| | | || |||||||| |||
Sbjct 662 GTTCCGA-AAACTCCGATG-GATCTACGGTTGCTGA-TTAAGATATCTATGAATACTGGT 718
Query 682 ATCAGGTTTC-TTGACTGTGTTCCAGA-TTTCATCCTCTCCCAATTCATCGC-------- 731
| | | ||| | || || |||||||| ||| |||| ||||||||||||||
Sbjct 719 TTAACG-TTCGTCGATTGGGTTCCAGACTTT-TTCCTTTCCCAATTCATCGCTGTAATGT 776
Query 732 -T---ACAAATCGGCAAGAACTTGTTGATTTAGCTAAGAATTTGCTGGAAAGAGAAGAGG 787
| | ||||||||| || ||| |||| |||||||||||||| ||||| |||| ||||
Sbjct 777 ATGAGAAAAATCGGCAGGAGCTTCTTGAGCTAGCTAAGAATTTGTTGGAACGAGAGGAGG 836
Query 788 AGCCAGAtttttttGCAATATCACAGAAAACGTTAATCGTTTGGGGTGATAAGGATAATG 847
| ||||| || || |||||| ||||||||||||||||||||||| || ||||| || |
Sbjct 837 AACCAGAATTGCCTGTAATATCCCAGAAAACGTTAATCGTTTGGGGAGACAAGGACAAGG 896
Query 848 TGTTTCCCTTGGAGCATGGACGGCGTCTTCAAAGGCATTTGCCA-AATTCGAGTTTAGAG 906
|||||||||||||||||| || || ||||||||||| || | ||| || ||||||
Sbjct 897 TGTTTCCCTTGGAGCATGCTTATCGGCTGCAAAGGCATTT-ACAGAGTTCAAGATTAGAG 955
Query 907 GTATTGAAGGAAATTGGACATGGTGTGAACATTGAAGCACCAACTACTCTTAATAATTTG 966
|| | ||||||| ||||| | ||| ||||||||||||||||||||||||||||||||
Sbjct 956 ATAATAAAGGAAACAGGACACGCTGTTAACATTGAAGCACCAACTACTCTTAATAATTTT 1015
Query 967 ATTATCT-CGTTTGTTTTAGGTGCT 990
|||| || ||||||| ||| |||||
Sbjct 1016 ATTA-CTTCGTTTGTCTTAAGTGCT 1039
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 48777356737
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5