BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg908904
Length=1140
Score E
Sequences producing significant alignments: (Bits) Value
AT1G72910.1 | Symbols: | Toll-Interleukin-Resistance (TIR) dom... 1206 0.0
AT1G72900.1 | Symbols: | Toll-Interleukin-Resistance (TIR) dom... 1118 0.0
AT1G72940.1 | Symbols: | Toll-Interleukin-Resistance (TIR) dom... 977 0.0
AT1G72920.1 | Symbols: | Toll-Interleukin-Resistance (TIR) dom... 660 0.0
AT1G72930.1 | Symbols: TIR | toll/interleukin-1 receptor-like |... 571 4e-162
> AT1G72910.1 | Symbols: | Toll-Interleukin-Resistance (TIR) domain-containing
protein | chr1:27435614-27437144 FORWARD LENGTH=1420
Length=1420
Score = 1206 bits (653), Expect = 0.0
Identities = 975/1122 (87%), Gaps = 55/1122 (5%)
Strand=Plus/Plus
Query 1 ATGTCTTGTGC-TACTGCGACTAAGTACGATGTTTTTCTGACTTTCAGAGGACTTGACAC 59
||||||| | | |||||| ||||||||||||||||| || | ||||||||| | ||||||
Sbjct 21 ATGTCTTCT-CATACTGCAACTAAGTACGATGTTTTCCTAAGTTTCAGAGGGCATGACAC 79
Query 60 TCGCC-GCAACTTCATCAGCTTTCTCTACCAAGAACTGGTTCGAAGGAAG-ATTCGAACC 117
||||| | ||||||||||| ||||||||| ||||||||||||||||| || |||||||||
Sbjct 80 TCGCCAG-AACTTCATCAGTTTTCTCTACAAAGAACTGGTTCGAAGG-AGCATTCGAACC 137
Query 118 TTCAAAGACGACAAAGAGCTGAAGAATGGCCAGAGGATTTCGCCGGAGCTCAAACGCGCC 177
||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||
Sbjct 138 TTCAAAGACGACAAAGAGCTGGAGAATGGCCAGAGGATTTCGTCGGAGCTCAAACGCACC 197
Query 178 ATCGAAGAGTCGAGATTCGCCGTCGTTGTTGTCTCCCAGAACTACGCTGCGTC-TCGTTG 236
||||| | ||| ||||||||||||||||||||||| ||| ||| |||||||| || |||
Sbjct 198 ATCGAGGTGTCAAGATTCGCCGTCGTTGTTGTCTCAGAGACCTATGCTGCGTCTTC-TTG 256
Query 237 GTGTCTCAAAGAGCTCGTGAA-GATCATGGATTTCGAAAACAAGGATTCGATCACCGTGA 295
||||||| | |||||||| || |||||||||||||||||| |||| ||| ||||||||||
Sbjct 257 GTGTCTCGATGAGCTCGT-AACGATCATGGATTTCGAAAAAAAGGGTTCCATCACCGTGA 315
Query 296 TACCCATCTTCTACGGCGTGGAACCGGCCGGTCATGTGAGATGGCAGACCGGAGTTGTCG 355
| ||||||||||||||||||||||| | ||||||||| |||||||||||||| |||
Sbjct 316 TGCCCATCTTCTACGGCGTGGAACC-G--AATCATGTGAGGTGGCAGACCGGAGTACTCG 372
Query 356 CTGAACATTTTAAGAAGCATGAGAGTAGAGAAAAGCATGAGAAAGTGCTTCAATGGAGGC 415
||||||| |||||||| |||| |||||||||| | ||||||||||||||| |||||||||
Sbjct 373 CTGAACAGTTTAAGAAACATGGGAGTAGAGAAGATCATGAGAAAGTGCTTAAATGGAGGC 432
Query 416 AAGCGTTGGCCGCTTTTGCGCAACTATCCGGCGATTGTTCAGGGGTTGATGACTCGAACC 475
|||| ||| || |||||||||||| ||||||||||||||||| | |||||||||||| |
Sbjct 433 AAGCATTGACCAATTTTGCGCAACTCTCCGGCGATTGTTCAGGTGATGATGACTCGAAGC 492
Query 476 TGGT---C------GCTCACGAGATATCAAAAAAGAAGAAGATTTTTGCAACAATAAGCA 526
|||| | ||| ||||||||||||| ||||||| ||||| ||||||||||| ||
Sbjct 493 TGGTGGACAAAATTGCTAACGAGATATCAAACAAGAAGACGATTTATGCAACAATAAACA 552
Query 527 ATGGGAAGAACCTAGTTGGGATTGATACACACATGAAGGAACTTAA-CAAAAAATTGGAT 585
|||||||||| |||||||||||||||||||||||||||||||| || | | || || ||
Sbjct 553 ATGGGAAGAATCTAGTTGGGATTGATACACACATGAAGGAACTAAACCGATTAA-TGCAT 611
Query 586 TTGAATTCCAACAAAG--A-TGTGAGAATGGTTGGGATTTGGACAAGAGGAGGCGATGGT 642
|||||| |||||||| | ||| |||||||||||||||||| |||||||||||||||||
Sbjct 612 ATGAATTGCAACAAAGTTACTGTAAGAATGGTTGGGATTTGGGCAAGAGGAGGCGATGGT 671
Query 643 AGATCGGCTCTAGCTAAATATGTTTATCAGGACATC-TGTCAACAGTTTGACAGTCATTG 701
||||| ||||||||||||||||||||||| |||||| ||||||||||||||||| |||||
Sbjct 672 AGATCAGCTCTAGCTAAATATGTTTATCA-GACATCTTGTCAACAGTTTGACAGCCATTG 730
Query 702 TTTTCTGGGAAACGTGAAAACGATTTCTCAGGGTCGCCACTCAGCGCATCTACACCACGA 761
|||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 731 TTTTCTTGGAAACGTGAAAACGATTTCTCAGGGTCGCCACTCAGCGCATCTACACGACGA 790
Query 762 GTTTCTGCA-AAATATTCAAAGAGAAAACCCTAACAAACAAAGTCTCAAGAACCAAAAGG 820
||||||| | ||||||| |||||||| || ||||||||||| |||| ||||| |||||||
Sbjct 791 GTTTCTG-AGAAATATTAAAAGAGAAGACTCTAACAAACAATGTCTTAAGAATCAAAAGG 849
Query 821 TTCTGCTTGTGGCAGACGACGTCGA-TAAGCTTGAACAGTTAGAAGCTCTTGCAGGGGAT 879
||||||||||||||||| |||| | |||| || ||||||||||||||||||||||||||
Sbjct 850 TTCTGCTTGTGGCAGACAACGTT-ACTAAGGTTAAACAGTTAGAAGCTCTTGCAGGGGAT 908
Query 880 TTCAGCAGTTTTGGTCCGGGGAGTGTTGTTATCATCACTACACA-AGACAAGCAGTTGTT 938
||||||||||||||||| |||||||||||||| ||||||||| | | ||||| ||||||
Sbjct 909 TTCAGCAGTTTTGGTCCTGGGAGTGTTGTTATTATCACTACAGACA-ACAAGGGGTTGTT 967
Query 939 GACTTCTTATGGTATAAAAGATGTCTACGAAGTAGAGTATTTGACATTCCAGAAAGTTTG 998
|| |||||||||||||| ||||||||||||||| ||| |||||| | | ||||
Sbjct 968 GAATTCTTATGGTATAACAGATGTCTACGAAGTTGAGCATTTGA-AGT--------TTTG 1018
Query 999 TC-AACTCTTCCGACGACAATTCGCCTTTAAAAAGAGAGACATTTCTGCTGCGATCCGGC 1057
| || |||| ||| || || | |||||||||||||| | | |||||| ||| ||
Sbjct 1019 TGGAA-TCTTACGAT--CA-TTGGGCTTTAAAAAGAGAG-C-T----GCTGCGTTCCAGC 1068
Query 1058 GGGCTTTGTGTAGAGCAACGAATTTTGCCACGGAATGttttt 1099
|||||||||||||||||| || ||||||||||||||||||||
Sbjct 1069 GGGCTTTGTGTAGAGCAAAGAGTTTTGCCACGGAATGTTTTT 1110
> AT1G72900.1 | Symbols: | Toll-Interleukin-Resistance (TIR) domain-containing
protein | chr1:27432195-27433782 FORWARD LENGTH=1363
Length=1363
Score = 1118 bits (605), Expect = 0.0
Identities = 975/1143 (85%), Gaps = 68/1143 (6%)
Strand=Plus/Plus
Query 1 ATGTCTTGTGCTACTGCGAC---TAAGTACGATGTTTTTCTGACTTTCAGAGGACTTGAC 57
||||||| |||||||||||| ||| |||||||||||||||| ||||||||||| |||
Sbjct 22 ATGTCTTCTGCTACTGCGACTTATAACTACGATGTTTTTCTGAGTTTCAGAGGACCCGAC 81
Query 58 ACTCGCCGCAACTTCATCAGCTTTCTCTACCAAGAACTGGTTCGAAGGAAGATTCGAACC 117
||||||||||| |||||||||||||||||| ||||||| ||| ||||| | |||||||||
Sbjct 82 ACTCGCCGCAAGTTCATCAGCTTTCTCTACAAAGAACTTGTTGGAAGGGACATTCGAACC 141
Query 118 TTCAAAGACGACAAAGAGCTGA-AGAATGGCCAGAGGATTTCGCCGGAGCTCAAACGCGC 176
|| ||||||||||||||||| | |||||||||||| |||||| |||||||||| || |||
Sbjct 142 TTTAAAGACGACAAAGAGCT-AGAGAATGGCCAGATGATTTCTCCGGAGCTCATACTCGC 200
Query 177 CATCGAAGAGTCGAGATTCGCCGTCGTTGTTGTCTCCCAGAACTACGCTGCGTC-TCGTT 235
|||||| || |||||||| |||||||||||||||||| ||||||||||||||| || ||
Sbjct 201 CATCGAGGATTCGAGATTTGCCGTCGTTGTTGTCTCCGTGAACTACGCTGCGTCTTC-TT 259
Query 236 GGTGTCTCAAAGAGCTCGTGAAGATCATGGAT-TTC-GAA-AACAAGGATTCGATCACCG 292
|||||||| | |||||||| |||||||||||| | | ||| ||||||| ||| |||||||
Sbjct 260 GGTGTCTCGATGAGCTCGTAAAGATCATGGATATCCAGAAGAACAAGGGTTCCATCACCG 319
Query 293 TGATACCCATCTTCTACGGCGTGGAACCGGCCG-GTCATGTGA-GATGGCAGACCGGAGT 350
|||| || |||||||||||||| ||| ||| ||||| ||| || |||| | |||||
Sbjct 320 TGATGCCTATCTTCTACGGCGT-GAA---TCCGTGTCATTTGAGGA-GGCAAATCGGAGA 374
Query 351 TGTCGCTGAACATTTTAAGAAGCATGAGAG-TAGAG-AAAAG--CATGAGAAAGTGCTTC 406
|||||||||||| ||||||||||| ||| | |||| ||||| | |||||||||||||
Sbjct 375 TGTCGCTGAACAGTTTAAGAAGCACGAG-GCAAGAGAAAAAGATCTTGAGAAAGTGCTTA 433
Query 407 AATGGAGGCAAGCGTTGGCCGCTTTTGCGCA-ACTA--TCCGGCGATTGTTCAGGGGTTG 463
|||||||||||||||||||||| |||| ||| | || ||||||||||||||||||| |
Sbjct 434 AATGGAGGCAAGCGTTGGCCGC-TTTG-GCAGA-TATCTCCGGCGATTGTTCAGGGGAAG 490
Query 464 ATGACTCGAA-C--CT-G--G---TCGCTCACGAGATATCAAAAAAGAAGAAGATTTTTG 514
|||||||||| | | | | ||||| || ||||||||||| || || ||| ||
Sbjct 491 ATGACTCGAAGCTGGTGGACGTAATCGCTGACAAGATATCAAAAGAGCTGATGATAGTTA 550
Query 515 CAACAATAAGCAATGGGAAGAACCTAGTTGGGATTGATACACACATGAAGGAACTTAA-C 573
||| |||||||||||||| |||||||||||||||||||| ||||||||| |||||||| |
Sbjct 551 CAAGAATAAGCAATGGGAGGAACCTAGTTGGGATTGATAAACACATGAACGAACTTAACC 610
Query 574 AAAAAATTGGATTTGAATTCCAACAAAGATGTGAGAATGGTTGGGATTTGGACAAGAGGA 633
| | ||||||||||||||||||||| | ||||||||||||||||||| ||||||||
Sbjct 611 GATTGA-TGGATTTGAATTCCAACAAAGGTAAGAGAATGGTTGGGATTTGGGCAAGAGGA 669
Query 634 GGCGA-TGGTAGATCGGCTCTAGCTAAATATGTTTATCAGGACAT-CTGTCAACAGTTTG 691
|| | | ||||||||||||||||||||||||||||||| ||||| ||||||||| ||||
Sbjct 670 GG-AAGTTGTAGATCGGCTCTAGCTAAATATGTTTATCA-GACATCCTGTCAACACTTTG 727
Query 692 ACAGTCATTGTTTTCTGGGAAACGTGAAAAC-GATTTCTCAGGGTCGCCAC--T--CAGC 746
| || ||||||||||| ||||||||| |||| ||||| ||||||| | || | |||
Sbjct 728 ATAGCCATTGTTTTCTTGGAAACGTG-AAACGGATTTGTCAGGGTAACTACTTTGAAAGC 786
Query 747 GCATCTACACCACGAGTTTCTGCAAAATATTCAAAGAGAAAACCCTAACAAACAAAGTCT 806
||||||||| | ||||||||| | ||||||||| |||||||| ||| ||||||||||||
Sbjct 787 -CATCTACACAAAGAGTTTCTGGATAATATTCAAGGAGAAAACTCTAGCAAACAAAGTCT 845
Query 807 CAAGAACCAAAAGGTTCTGCTTGTGGCAGACGACGTCGATAAGCTTGAACAGTTAGAAGC 866
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 846 CAAGAAGCAAAAGGTTCTGCTTGTGGCAGACGACGTCGATAAGCTTGAACAGTTAGATGC 905
Query 867 TCTTGCAGGGGATTTCAGCAGTTTTGGTCCGGGGAGTGTTGTTATCATCACTACACAAGA 926
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct 906 TCTTGCAGGGGATTTCAGCGGTTTTGGTCCGGGGAGTGTTGTTATCATCACTACAAAAGA 965
Query 927 CAAGCAGTTGTTGACTTCTTATGGTATAAAAGAT-GTCTACGAAG-TAGAGTATTTGACA 984
||||||||||||| ||||||||||||| | | | |||||||||| | |||| |||||||
Sbjct 966 TAAGCAGTTGTTGATTTCTTATGGTATACA-GCTTGTCTACGAAGCT-GAGTTTTTGACA 1023
Query 985 TTCCAGAAAGTTTGTCA-ACTCTTCCGACGACAATTCGCCTTTAAAAAGAGAGAC-A--T 1040
||||||||| |||||| | ||||||| || || |||||||||||||||||| | |
Sbjct 1024 TTCCAGAAATTTTGTCGTAG-CTTCCGAT--CA-TTGGCCTTTAAAAAGAGAGACGACAT 1079
Query 1041 TTCTGCTGCGATCCG-GCGGGCTTTGTGTAGA----GCAACGAATTTTGCCACGGAATGt 1095
|||||||||| || | | ||||||||| || | |||| |||||||||||||||||||
Sbjct 1080 TTCTGCTGCGTTC-GAGTGGGCTTTGTATATATAAAGCAATGAATTTTGCCACGGAATGT 1138
Query 1096 ttt 1098
|||
Sbjct 1139 TTT 1141
> AT1G72940.1 | Symbols: | Toll-Interleukin-Resistance (TIR) domain-containing
protein | chr1:27442238-27443856 FORWARD LENGTH=1525
Length=1525
Score = 977 bits (529), Expect = 0.0
Identities = 908/1082 (84%), Gaps = 61/1082 (6%)
Strand=Plus/Plus
Query 1 ATGTCTTGTGCTACTGCGACTAAGTACGATGTTTTTCTGACTTTCAGAGGACTTGACACT 60
||| ||| | |||||||||||||||| ||||| ||||||| |||||||||| | ||||||
Sbjct 41 ATGACTTCTCCTACTGCGACTAAGTATGATGTCTTTCTGAGTTTCAGAGGAGTCGACACT 100
Query 61 CGCCGCAACTTCATCAGCTTTCTCTACCAAGAACTGGTTCGAAGGAAGATTCGAACCTTC 120
|| |||||||||||||| ||||||||| ||||| | ||||||||||| |||||||| |||
Sbjct 101 CGTCGCAACTTCATCAGTTTTCTCTACAAAGAATTCGTTCGAAGGAAAATTCGAACTTTC 160
Query 121 AAAGACGACAAAGAGC-TGAAGAATGGCCAGAGGATTTCGCCGGAGCTCAAACGCGCCAT 179
||||||||||| |||| || ||||||||| ||||||||| ||||||||||||||||||||
Sbjct 161 AAAGACGACAAGGAGCTTG-AGAATGGCCGGAGGATTTCTCCGGAGCTCAAACGCGCCAT 219
Query 180 CGAAGAGTCGAGATTCGCCGTCGTTGTTGTCTC-CCAGAACTACGCTGCGTCTCGTTGGT 238
||| ||||||| ||||||||||||||||||||| | |||||||||||||||| |||||
Sbjct 220 CGAGGAGTCGAAATTCGCCGTCGTTGTTGTCTCTGTA-AACTACGCTGCGTCTCCTTGGT 278
Query 239 GTCTCAAAGAGCTCGTGAAGATCATGGATTTCGAAAACAAGGATTCGATCACCGTGATAC 298
||||| | ||||| |||||||| ||||||||||||||||||| ||| ||||||||||| |
Sbjct 279 GTCTCGATGAGCTTGTGAAGATTATGGATTTCGAAAACAAGGGTTCCATCACCGTGATGC 338
Query 299 CCATCTTCTACGGCGTGGAACCGGCCGGTCATGTGA-GATGGCAGACCGGAGTTGTCGCT 357
| ||||||||||| ||||| || | ||||| ||| || |||||| ||||| |||||||
Sbjct 339 CTATCTTCTACGGTGTGGATCC-G--TGTCATTTGAGGA-GGCAGATCGGAGATGTCGCT 394
Query 358 GAACATTTTAAGAAGCATGAGAG-TAGAGAA-AAG--CATGAGAAAG-TGCTTCAATGGA 412
||||| ||||||||||| ||| | ||||||| ||| |||||||||| |||||| ||||
Sbjct 395 GAACAGTTTAAGAAGCACGAG-GCTAGAGAAGAAGATCATGAGAAAGTTGCTTC-GTGGA 452
Query 413 GGCAAGCGTTGGCCGCTTTTGCGCAACTA--TCCGGCGATTG-T--T-C--AGGGGTTGA 464
| | ||| ||| || |||| || | || ||||| ||||| | | | | | | ||
Sbjct 453 GACGAGCATTGACC-AGTTTG-GCTAGTATCTCCGGAGATTGTTCATCCAAATGTGAAGA 510
Query 465 TGACTCGAACCTGGT---C------GCTCACGAGATATCAAAAAAGAAGAAGATTTTTGC 515
||| |||| ||||| | ||| || ||||||||||||| || || | || |
Sbjct 511 TGAAGCGAAGCTGGTGGACGAAATTGCTGACAAGATATCAAAAAATCTGATGACTGTTAC 570
Query 516 AACAATAAGCAATGGGAAGAACCTAGTTGGGATTGATACACACATGAAGGAACTTAACAA 575
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 571 AACAATAAGCAATGGGAAGAACCTAGTTGGGATTGATACACACATGAAGGCTCTTAACAA 630
Query 576 AAAATTGGATTTGAATTCCAACAAA-GATGTGAGAATGGTTGGGATTTGGACAAGAGGAG 634
|||| |||||||||||||||||||| | | ||||| |||||||||||||| ||||||||
Sbjct 631 AAAACTGGATTTGAATTCCAACAAAAGTT-TGAGAGTGGTTGGGATTTGGGCAAGAGGAT 689
Query 635 GCGATGGTAGATCGGCTCTAGCTAAATATGTTTATCAGGACATCTGTCAACAGTTTGACA 694
| |||||||||| ||| ||||||||||||||||||| ||||||||||| || |||||||
Sbjct 690 ACAATGGTAGATCAGCTTTAGCTAAATATGTTTATCAAGACATCTGTCACCACTTTGACA 749
Query 695 GTCATTGTTTTCT-GGGAAACGTGAAAACGATTTCTCAGGGTCGCCACTCAGCGCATCTA 753
| |||||||| || ||||| |||||||| ||||||||||||||| |||| | ||||||||
Sbjct 750 GCCATTGTTT-CTTGGGAAGCGTGAAAAGGATTTCTCAGGGTCGTCACTTATCGCATCTA 808
Query 754 CACCACGAGTTTCTGCAAAAT-ATTCAAAGAGAAAACCCTAACAAACAAAGTCTCAAGAA 812
||| | ||||||||| | || |||||| | ||| ||| | | || ||||||| |
Sbjct 809 CACGAAGAGTTTCTG-ATAAGGATTCAA-G-GAAG----TAA-ACATAA--TCTCAAGGA 858
Query 813 CCAAAAGGTTCTGCTTGTGGCAGACGACGTCGATAAGCTTGAACAGTTAGAAGCTCTTGC 872
|||||||||| |||||||||| || || || ||||||||||||||||||| ||||||||
Sbjct 859 CCAAAAGGTTTTGCTTGTGGCTGATGATGTTTATAAGCTTGAACAGTTAGATGCTCTTGC 918
Query 873 AGGGGATTTCAGCAGTTTTGGTCCGGGGAGTGTTGTTATCATCACTACACAAGACAAGCA 932
| |||||||| | | ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 919 TGAGGATTTCAACGGGTTTGGTCCGGGAAGTGTTGTTATCATCACTACACAAGACAAGCA 978
Query 933 GT-TGTT-GACTTCTTATGGTATAAAAGAT-GTCTACGAAGTAGAG-TATTTGACATTCC 988
| |||| | |||| ||||||||| | | ||||||||||| ||| | ||||| |||||
Sbjct 979 -TCTGTTTGT-TTCTGCTGGTATAAA-GCTTGTCTACGAAGTTGAGCT-TTTGAAATTCC 1034
Query 989 AGAAAGTTTGTCAACTCTTCCGACGACAATTCGCCTTTAAAAAGAGAGACATTTCTGCTG 1048
||||||||||| |||||||||||| | | |||||||||||||||||||||||||||||||
Sbjct 1035 AGAAAGTTTGTGAACTCTTCCGAC-A-A-TTCGCCTTTAAAAAGAGAGACATTTCTGCTG 1091
Query 1049 CG 1050
||
Sbjct 1092 CG 1093
> AT1G72920.1 | Symbols: | Toll-Interleukin-Resistance (TIR) domain
family protein | chr1:27437928-27439091 FORWARD LENGTH=1070
Length=1070
Score = 660 bits (357), Expect = 0.0
Identities = 598/709 (84%), Gaps = 37/709 (5%)
Strand=Plus/Plus
Query 1 ATGTCTTGTGCTACTGCGACTAAGTACGATGTTTTTCTGACTTTCAGAGGACTTGACACT 60
||||||| | ||||||||||||||||||| || ||||||| |||||||||||| ||||||
Sbjct 20 ATGTCTTCTCCTACTGCGACTAAGTACGACGTCTTTCTGAGTTTCAGAGGACTCGACACT 79
Query 61 CGCCGCAACTTCATCAGCTTTCTCTACCAAGAACTGGTTCGAAGGAAGATTCGAACCTTC 120
|| |||||||||||||| ||||||||| ||||||| |||||||| || |||||||| |||
Sbjct 80 CGTCGCAACTTCATCAGTTTTCTCTACAAAGAACTCGTTCGAAGAAAAATTCGAACTTTC 139
Query 121 AAAGACGACAAAGAGCT-GAAGAATGGCCAGAGGATTTCGCCGGAGCTCAAACGCGCCAT 179
||||||||||| ||||| | ||||||||| ||||||||| ||||||||||||||||||||
Sbjct 140 AAAGACGACAAGGAGCTCG-AGAATGGCCGGAGGATTTCTCCGGAGCTCAAACGCGCCAT 198
Query 180 CGAAGAGTCGAGATTCGCCGTCGTTGTTGTCTCCCAGAACTACGCTGCGTCTCGTTGGTG 239
||| ||||||| ||||||||||||||| ||||| ||||||||||||||||| ||||||
Sbjct 199 CGAGGAGTCGAAATTCGCCGTCGTTGTGGTCTCTGTGAACTACGCTGCGTCTCCTTGGTG 258
Query 240 TCTCAAAGAGCTCGTGAAGATCATGGATTTCGAAAACAAGGATTCGATCACCGTGATACC 299
|||| | ||||| |||||||| ||||||||||||||||||| ||| ||||||||||| ||
Sbjct 259 TCTCGATGAGCTTGTGAAGATTATGGATTTCGAAAACAAGGGTTCCATCACCGTGATGCC 318
Query 300 CATCTTCTACGGCGTGGAACCGGCCGGTCATGTGA-GATGGCAGACCGGAGTTGTCGCTG 358
|||||||||||||||| | | | ||||| ||| || |||||| ||||| ||||||||
Sbjct 319 TATCTTCTACGGCGTGG-ATC--CTTGTCATTTGAGGA-GGCAGATCGGAGATGTCGCTG 374
Query 359 AACATTTTAAGAAGCATGAGAG-TAGAGAA-AAG--CATGAGAAAGT-GCTTCAATGGAG 413
|||| ||||||||||| ||| | ||||||| ||| ||||||||||| ||||| |||||
Sbjct 375 AACAGTTTAAGAAGCACGAG-GCTAGAGAAGAAGATCATGAGAAAGTAGCTTC-GTGGAG 432
Query 414 GCAAGCGTTGGCC-GCTTTTGCGCAACTA--TCCGGCGATTGTTCA--G----GGGTTGA 464
| ||| ||| || | ||| ||| | || |||||||| |||||| | ||| ||
Sbjct 433 ACGAGCATTGACCAG-TTTAGCG--AGTATCTCCGGCGAATGTTCATTGAAATGGGAAGA 489
Query 465 TGACTCGAACCTGGT---C------GCTCACGAGATATCAAAAAAGAAGAAGATTTTTGC 515
||| |||| ||||| | ||| || ||||||||||||| || || | || |
Sbjct 490 TGAAGCGAATCTGGTGGACGAAATTGCTGACAAGATATCAAAAAATCTGATGACTGTTAC 549
Query 516 AACAATAAGCAATGGGAAGAACCTAGTTGGGATTGATACACACATGAAGGAACTTAACAA 575
||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||||
Sbjct 550 AACAATAAGCAATGGGAGGGACCTAGTTGGGATTGATACACACATGAAGGCTCTTAACAA 609
Query 576 AAAATTGGATTTGAATTCCAACAAA-GATGTGAGAATGGTTGGGATTTGGACAAGAGGAG 634
||||||||||||||||||||||||| | | ||||| |||||||||||||| ||||||||
Sbjct 610 AAAATTGGATTTGAATTCCAACAAAAGTT-TGAGAGTGGTTGGGATTTGGGCAAGAGGAT 668
Query 635 GCGATGGTAGATCGGCTCTAGCTAAATATGTTTATCAGGACATCTGTCA 683
| |||||||||| ||| ||||||||||||||||||| |||||||||||
Sbjct 669 ACAATGGTAGATCAGCTTTAGCTAAATATGTTTATCAAGACATCTGTCA 717
> AT1G72930.1 | Symbols: TIR | toll/interleukin-1 receptor-like
| chr1:27439452-27440464 FORWARD LENGTH=872
Length=872
Score = 571 bits (309), Expect = 4e-162
Identities = 463/535 (87%), Gaps = 20/535 (4%)
Strand=Plus/Plus
Query 1 ATGTCTTGTGC-TACTGCGACTAAGTACGATGTTTTTCTGACTTTCAGAGGACTTGACAC 59
||||||| | | |||||| |||||||| |||||||| || | ||||||||| | ||||||
Sbjct 25 ATGTCTTCT-CATACTGCAACTAAGTATGATGTTTTCCTAAGTTTCAGAGGGCATGACAC 83
Query 60 TCGCCGCAACTTCATCAGCTTTCTCTACCAAGAACTGGTTCGAAGGAAG-ATTCGAACCT 118
||||| |||||||||||| ||||||||| ||||||||||||||||| || ||||||||||
Sbjct 84 TCGCCACAACTTCATCAGTTTTCTCTACAAAGAACTGGTTCGAAGG-AGCATTCGAACCT 142
Query 119 TCAAAGACGACAAAGAGCTGAAGAATGGCCAGAGGATTTCGCCGGAGCTCAAACGCGCCA 178
|||||||||||||||||||| |||||||||||||| ||||||||||||||||| || |||
Sbjct 143 TCAAAGACGACAAAGAGCTGGAGAATGGCCAGAGGTTTTCGCCGGAGCTCAAAAGCCCCA 202
Query 179 TCGAAGAGTCGAGATTCGCCGTCGTTGTTGTCTCCCAGAACTACGCTGCGTCT-CGTTGG 237
|||| | ||| ||||||||||||||||||||||| ||||||| ||||||||| | ||||
Sbjct 203 TCGAGGTGTCAAGATTCGCCGTCGTTGTTGTCTCAGAGAACTATGCTGCGTCTTC-TTGG 261
Query 238 TGTCTCAAAGAGCTCGTGAA-GATCATGGATTTCGAAAACAAGGATTCGATCACCGTGAT 296
|||||| | |||||||| || |||||||||||||||||| |||| ||| |||||||||||
Sbjct 262 TGTCTCGATGAGCTCGT-AACGATCATGGATTTCGAAAAAAAGGGTTCCATCACCGTGAT 320
Query 297 ACCCATCTTCTACGGCGTGGAACCGGCCGGTCATGTGAGATGGCAGACCGGAGTTGTCGC 356
|||||||||||||||||||||||| ||||||||| |||||||||||||| ||||
Sbjct 321 GCCCATCTTCTACGGCGTGGAACCGAA---TCATGTGAGGTGGCAGACCGGAGTACTCGC 377
Query 357 TGAACATTTTAAGAAGCATGAGAGTAGAGAAAAGCATGAGAAAGTGCTTCAATGGAGGCA 416
|||||| |||||||| |||| |||||||||| | | ||||||||| ||| ||||||||||
Sbjct 378 TGAACAGTTTAAGAAACATGCGAGTAGAGAAGATCCTGAGAAAGTTCTTAAATGGAGGCA 437
Query 417 AGCGTTGGCCGCTTTTGCGCAACTATCCGGCGATTGTTCAGGGGTTGATGACTCGAACCT 476
||| ||| || |||||||||||| ||||||||||||||||| | |||||||||||| ||
Sbjct 438 AGCATTGACCAATTTTGCGCAACTCTCCGGCGATTGTTCAGGTGATGATGACTCGAAGCT 497
Query 477 GGTCG-C----T--C-A-CGAGATATCAAAAAAGAAGAAGATTTTTGCAACAATA 522
||| | | | | | |||||||||||| ||||||| ||||| ||||||||||
Sbjct 498 GGTGGACAAAATTGCTAACGAGATATCAAACAAGAAGACGATTTATGCAACAATA 552
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 55923407130
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5