BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg908905
Length=1137
Score E
Sequences producing significant alignments: (Bits) Value
AT1G72940.1 | Symbols: | Toll-Interleukin-Resistance (TIR) dom... 1554 0.0
AT1G72950.1 | Symbols: | Disease resistance protein (TIR-NBS c... 1221 0.0
AT1G72900.1 | Symbols: | Toll-Interleukin-Resistance (TIR) dom... 1107 0.0
AT1G72920.1 | Symbols: | Toll-Interleukin-Resistance (TIR) dom... 1057 0.0
AT1G72930.1 | Symbols: TIR | toll/interleukin-1 receptor-like |... 490 1e-137
> AT1G72940.1 | Symbols: | Toll-Interleukin-Resistance (TIR) domain-containing
protein | chr1:27442238-27443856 FORWARD LENGTH=1525
Length=1525
Score = 1554 bits (841), Expect = 0.0
Identities = 1014/1096 (93%), Gaps = 17/1096 (2%)
Strand=Plus/Plus
Query 1 ATGTCTTCTGCTACTGCGACGAAGTACGATGTCTTTCTGAGTTTCAGAGGACTCGACACT 60
||| ||||| |||||||||| ||||| |||||||||||||||||||||||| ||||||||
Sbjct 41 ATGACTTCTCCTACTGCGACTAAGTATGATGTCTTTCTGAGTTTCAGAGGAGTCGACACT 100
Query 61 CGTCGCAACTTCATCAGTTTTCTCTACAAAGAATTGGTTCGAA-GAAACATTCGTACCTT 119
||||||||||||||||||||||||||||||||||| ||||||| |||| ||||| || ||
Sbjct 101 CGTCGCAACTTCATCAGTTTTCTCTACAAAGAATTCGTTCGAAGGAAA-ATTCGAACTTT 159
Query 120 CAAACACGACAAGGAGCTTGAGAATGGCCGGAGGATTTCGCCGGAGCTCAAACGCGCCAT 179
|||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 160 CAAAGACGACAAGGAGCTTGAGAATGGCCGGAGGATTTCTCCGGAGCTCAAACGCGCCAT 219
Query 180 CGAGGAGTCGAAATTCGCCGTCGTTGTTGTCTCTGTGAATTACGCTGCGTCTCCTTGGTG 239
|||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct 220 CGAGGAGTCGAAATTCGCCGTCGTTGTTGTCTCTGTAAACTACGCTGCGTCTCCTTGGTG 279
Query 240 TCTCGATGAGCTCGTGAAGATCATGGATTTCGAAAACAAGGGTTCGATCACTGTGATGCC 299
|||||||||||| |||||||| ||||||||||||||||||||||| ||||| ||||||||
Sbjct 280 TCTCGATGAGCTTGTGAAGATTATGGATTTCGAAAACAAGGGTTCCATCACCGTGATGCC 339
Query 300 TATCTTCTACGGAGTGGATCCGTGTCATTTGAGGAGACAGAGCGGAGATGTCGCTGAACA 359
|||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct 340 TATCTTCTACGGTGTGGATCCGTGTCATTTGAGGAGGCAGATCGGAGATGTCGCTGAACA 399
Query 360 GTTTAAGAAGCACGAGGCTAGAGAAGAAGATCTTGATAAAGTAGCTTCATGGAGACGAGC 419
|||||||||||||||||||||||||||||||| ||| ||||| ||||| |||||||||||
Sbjct 400 GTTTAAGAAGCACGAGGCTAGAGAAGAAGATCATGAGAAAGTTGCTTCGTGGAGACGAGC 459
Query 420 ATTGACCAGTTTGGCGAGTATCTCCGGCGATTGTTCATTGAAATGTGAAGATGAATCGAA 479
||||||||||||||| ||||||||||| |||||||||| ||||||||||||||| ||||
Sbjct 460 ATTGACCAGTTTGGCTAGTATCTCCGGAGATTGTTCATCCAAATGTGAAGATGAAGCGAA 519
Query 480 GCTGGTCGACGAAATTGCTGACAAGATATCAAAAAAGCTGATGATTGTGACAACAATAAG 539
|||||| ||||||||||||||||||||||||||||| ||||||| ||| |||||||||||
Sbjct 520 GCTGGTGGACGAAATTGCTGACAAGATATCAAAAAATCTGATGACTGTTACAACAATAAG 579
Query 540 CAATGGGA-GTAACCTAGTTGGGATTGATAGACACATGAAGGCTCTTAACCGAAAATTGG 598
|||||||| | ||||||||||||||||||| ||||||||||||||||||| |||| |||
Sbjct 580 CAATGGGAAG-AACCTAGTTGGGATTGATACACACATGAAGGCTCTTAACAAAAAACTGG 638
Query 599 ATTTGAATTCCAACAAAGGTTTGAGAGTGGTTGGGATTTGGGCAAGAGGATACAATGGTA 658
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 639 ATTTGAATTCCAACAAAAGTTTGAGAGTGGTTGGGATTTGGGCAAGAGGATACAATGGTA 698
Query 659 GATCGGCTTTAGCTAAATATGTTTATCAGGAAATCTGTCAACACTTTGAAAGCCATTGTT 718
|||| ||||||||||||||||||||||| || |||||||| |||||||| ||||||||||
Sbjct 699 GATCAGCTTTAGCTAAATATGTTTATCAAGACATCTGTCACCACTTTGACAGCCATTGTT 758
Query 719 TCTTGGGAAGCGTGAAAAGGATTTCACATGGTCGCCACTTATCGCATCTACACGAAGAGT 778
||||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||
Sbjct 759 TCTTGGGAAGCGTGAAAAGGATTTCTCAGGGTCGTCACTTATCGCATCTACACGAAGAGT 818
Query 779 TTCTGATAAGGATTCAAGGAGAATACGTGAGTAAACAGAATCTCAAGAACCAAAAGGTTC 838
|||||||||||||||||||| | || | || || ||||||||| |||||||||||
Sbjct 819 TTCTGATAAGGATTCAAGGA-A----GT-A--AA-CATAATCTCAAGGACCAAAAGGTTT 869
Query 839 TGCTTGTGGCTGATGATGTCAATAAGCTTGAACAGTTAGATGCTCTTGCAGAGGACTTCA 898
||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||
Sbjct 870 TGCTTGTGGCTGATGATGTTTATAAGCTTGAACAGTTAGATGCTCTTGCTGAGGATTTCA 929
Query 899 ACTCTTTTGGTCCGGGGAGTGTTGTTATTATCACTACACAAGACAAGCAGCTGTTTGTTT 958
|| ||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||
Sbjct 930 ACGGGTTTGGTCCGGGAAGTGTTGTTATCATCACTACACAAGACAAGCATCTGTTTGTTT 989
Query 959 CTGCTGGTATAAAGCTTGTTTATGAAGTAGAGCTTTTGAGATTCCAGAAAGTTTGTGAAC 1018
||||||||||||||||||| || ||||| |||||||||| ||||||||||||||||||||
Sbjct 990 CTGCTGGTATAAAGCTTGTCTACGAAGTTGAGCTTTTGAAATTCCAGAAAGTTTGTGAAC 1049
Query 1019 TCATCCGAACA-TTCGCCTTTAAAAAGAGAGACATTTCTGCTGCGTTACA-GTTGGTTTA 1076
|| ||||| || ||||||||||||||||||||||||||||||||| | || |||||||||
Sbjct 1050 TCTTCCGA-CAATTCGCCTTTAAAAAGAGAGACATTTCTGCTGCGGT-CAAGTTGGTTTA 1107
Query 1077 CTACAGGGCAACAAAT 1092
||| ||||||||||||
Sbjct 1108 CTATAGGGCAACAAAT 1123
> AT1G72950.1 | Symbols: | Disease resistance protein (TIR-NBS
class) | chr1:27444585-27445980 FORWARD LENGTH=1306
Length=1306
Score = 1221 bits (661), Expect = 0.0
Identities = 978/1127 (87%), Gaps = 37/1127 (3%)
Strand=Plus/Plus
Query 28 GATGTCTTTCTGAGTTTCAGAGGACTCGACACTCGTCGCAACTTCATCAGTTTTCTCTAC 87
||||| |||||||| |||||||||||||||||||| |||| |||||||||||| ||||||
Sbjct 34 GATGTTTTTCTGAGCTTCAGAGGACTCGACACTCGCCGCAGCTTCATCAGTTTCCTCTAC 93
Query 88 AAAGAATTGGTTCGAAGAAACATTCGTACCTTCAAACACGACAAGGAGCTTG-AGAATGG 146
|||||| || |||||||||||||||| ||||| ||| |||| |||||| ||| |||||||
Sbjct 94 AAAGAACTGATTCGAAGAAACATTCGAACCTTTAAAGACGATAAGGAG-TTGAAGAATGG 152
Query 147 CCGGAGGATTTCGCCGGAGCTCAA-ACGCGCCATCG-AGGAGTCGAAATTCGCCGTCGTT 204
|||||||||| |||||||||| || ||||||||| | ||| ||||| |||||| ||||||
Sbjct 153 CCGGAGGATTACGCCGGAGCT-AATACGCGCCATTGAAGG-GTCGAGATTCGCAGTCGTT 210
Query 205 GTTGTCTCTGTGAATTACGCTGCGTCTCCTTGGTGTCTCGATGAGCTCGTGAAGATCATG 264
|| ||||| ||||||||||||||||||| |||||||||||| |||||||||||||| |||
Sbjct 211 GTGGTCTCCGTGAATTACGCTGCGTCTCGTTGGTGTCTCGAAGAGCTCGTGAAGATTATG 270
Query 265 GATTTCGAAAACAAGGGTTCGATCACTGTGATGCCTATCTTCTACGGAGTGGATCCGTGT 324
||||||||||||| ||| ||| ||| || ||||||||||||||||| ||||||||||||
Sbjct 271 GATTTCGAAAACATGGGCTCGCTCAAGGTCATGCCTATCTTCTACGGCGTGGATCCGTGT 330
Query 325 CATTTGAGGAGACAGAGCGGAGATGTCGCTGAACAGTTTAAGAAGCACGAGGCTAGAGAA 384
||| |||||||||||| |||||| ||||||||||||||||||||||| |||| | || |
Sbjct 331 CATGTGAGGAGACAGATCGGAGAAGTCGCTGAACAGTTTAAGAAGCATGAGGGT--AG-A 387
Query 385 GAAGATCTTGATAAAGTAGC-TTCATGGAGACGAGCATTGACCAGTTTGGCGAGTATCTC 443
||||||| ||| ||||| || ||||||||| | ||| ||||| | |||||||||||||||
Sbjct 388 GAAGATCATGAGAAAGT-GCTTTCATGGAGGCAAGCGTTGACTAATTTGGCGAGTATCTC 446
Query 444 CGGCGATTGTTCATTGAAATGTGAAGATGAATCGAAGCTGGTCGACGAAATTGCTGACAA 503
|||||||||||||| |||||| |||||||| |||||| ||||||| |||||| ||||||
Sbjct 447 CGGCGATTGTTCATGGAAATGGGAAGATGACTCGAAGATGGTCGAAGAAATTACTGACAG 506
Query 504 GATATCAAAAAAGCTGATGATTG-TGACAACAATAAGCAATGGGAGTAACCTAGTTGGGA 562
|||||||||| |||||||||||| | ||||||| ||||||||||||| |||| | ||||
Sbjct 507 GATATCAAAAGAGCTGATGATTGAT-ACAACAAGAAGCAATGGGAGTGACCTTGAAGGGA 565
Query 563 TTGATAG-ACACATGAAGGCTCTTAACCGAAAATTGGATTTGAATTCCAACAAAGGTTTG 621
||||| | ||||||||| |||||| |||| |||| |||| ||||| || ||| || ||
Sbjct 566 TTGAT-GCACACATGAAAGCTCTTCACCGTTTATTGAATTTAAATTCTAAGAAAAGTGTG 624
Query 622 AGAGTGGTTGGGATTTGGGCAAGAGGATACAATGGTAGATCGGCTTTAGCTAAATATGTT 681
|||||| |||||||||||||||||||| |||||||||||| ||||||||||||| ||||
Sbjct 625 AGAGTGATTGGGATTTGGGCAAGAGGAGGCAATGGTAGATCAGCTTTAGCTAAATTTGTT 684
Query 682 TATCAGGAA-ATCTGTCAACACTTTGAAAGCCATTGTTTCTTGGGAAGCGTGAAAAGGAT 740
||||| ||| |||||||||||||| ||||||||||||||||||| ||| |||||||||||
Sbjct 685 TATCA-GAACATCTGTCAACACTTCGAAAGCCATTGTTTCTTGGAAAGTGTGAAAAGGAT 743
Query 741 TTCACATGG-TCGCCACTTATCGCATC-TACACGAAGAGTTTCTGATAAGGATTCAAGGA 798
||| || || ||||||| | || || | |||||||||||||| ||||| |||||||||||
Sbjct 744 TTCTCA-GGATCGCCACCTGTCTCA-CTTACACGAAGAGTTTATGATACGGATTCAAGGA 801
Query 799 GAATACGTGAGTAAACAGAA-TCTCAAGAACCAAAAGGTTCTGCTTGTGGCTGATGATGT 857
|||| | |||||||| || ||||||||||||||||||||||| ||||||||||||||
Sbjct 802 GAATGCTTGAGTAAA-TTAAGGCTCAAGAACCAAAAGGTTCTGCTCGTGGCTGATGATGT 860
Query 858 CAATAAGCTTGAACAGTTAGATGCTCTTGCAGAGGACTTCAACT-CTTTTGGTCCGGGGA 916
|||||||||||||||||||||||||||||||||||||| |||| |||| ||||| ||||
Sbjct 861 GAATAAGCTTGAACAGTTAGATGCTCTTGCAGAGGACTTTAACTGCTTT-GGTCCTGGGA 919
Query 917 GTGTTGTTATTATCACTACACAAGACAAGCAGCTGTTTGTTTCTGCTGGTATAAAGCTTG 976
|| | |||||||||||||||||||||| ||||||| || | |||||||| ||||| ||||
Sbjct 920 GTATAGTTATTATCACTACACAAGACAGGCAGCTGCTTATCTCTGCTGGCATAAAACTTG 979
Query 977 TTTATGAAGTAGAGCTTTTGAGATTCCAGAAAGTTTGTGAACTCATCCGAACA-TTCGCC 1035
||||||||||||||||| | ||||||||||||||| ||| |||| || || || || |||
Sbjct 980 TTTATGAAGTAGAGCTTCTCAGATTCCAGAAAGTTCGTGGACTCTTCAGA-CAATTAGCC 1038
Query 1036 TTTAAAAAGAGAGACATTTCTGCTGCGTTAC-AGTTGG-TTTACTACAGGGCAACAAATC 1093
|| ||| ||| |||||||||||||||||| | || || ||| || |||||||| |||
Sbjct 1039 TTCAAAGAGAAAGACATTTCTGCTGCGTT-CGAGGTGTCTTTG-TATAGGGCAACGAATG 1096
Query 1094 TTGCCACGAGA-TGGTCT-GGTTGTATAAGTGGTAGATCTAG-TTAG 1137
|||||| | || |||| | ||||||||| |||||||||| || ||||
Sbjct 1097 TTGCCATG-GAATGGT-TAGGTTGTATATGTGGTAGATC-AGGTTAG 1140
> AT1G72900.1 | Symbols: | Toll-Interleukin-Resistance (TIR) domain-containing
protein | chr1:27432195-27433782 FORWARD LENGTH=1363
Length=1363
Score = 1107 bits (599), Expect = 0.0
Identities = 935/1091 (86%), Gaps = 48/1091 (4%)
Strand=Plus/Plus
Query 1 ATGTCTTCTGCTACTGCGAC---GAAGTACGATGTCTTTCTGAGTTTCAGAGGACTCGAC 57
|||||||||||||||||||| || |||||||| ||||||||||||||||||| ||||
Sbjct 22 ATGTCTTCTGCTACTGCGACTTATAACTACGATGTTTTTCTGAGTTTCAGAGGACCCGAC 81
Query 58 ACTCGTCGCAACTTCATCAGTTTTCTCTACAAAGAA-TTGGTTCGAAGAAACATTCGTAC 116
||||| ||||| |||||||| ||||||||||||||| || ||| |||| ||||||| ||
Sbjct 82 ACTCGCCGCAAGTTCATCAGCTTTCTCTACAAAGAACTT-GTTGGAAGGGACATTCGAAC 140
Query 117 CTTCAAACACGACAAGGAGCTTGAGAATGGCCGGAGGATTTCGCCGGAGCTCAAACGCGC 176
||| ||| ||||||| ||||| |||||||||| || |||||| |||||||||| || |||
Sbjct 141 CTTTAAAGACGACAAAGAGCTAGAGAATGGCCAGATGATTTCTCCGGAGCTCATACTCGC 200
Query 177 CATCGAGGAGTCGAAATTCGCCGTCGTTGTTGTCTCTGTGAATTACGCTGCGTCTCCTTG 236
||||||||| |||| ||| ||||||||||||||||| ||||| |||||||||||| ||||
Sbjct 201 CATCGAGGATTCGAGATTTGCCGTCGTTGTTGTCTCCGTGAACTACGCTGCGTCTTCTTG 260
Query 237 GTGTCTCGATGAGCTCGTGAAGATCATGGAT-TTC-GAA-AACAAGGGTTCGATCACTGT 293
|||||||||||||||||| |||||||||||| | | ||| ||||||||||| ||||| ||
Sbjct 261 GTGTCTCGATGAGCTCGTAAAGATCATGGATATCCAGAAGAACAAGGGTTCCATCACCGT 320
Query 294 GATGCCTATCTTCTACGGAGTGGATCCGTGTCATTTGAGGAGACAGAGCGGAGATGTCGC 353
|||||||||||||||||| ||| ||||||||||||||||||| || | ||||||||||||
Sbjct 321 GATGCCTATCTTCTACGGCGTGAATCCGTGTCATTTGAGGAGGCAAATCGGAGATGTCGC 380
Query 354 TGAACAGTTTAAGAAGCACGAGGCTAGAGAAGAAGATCTTGATAAAGTAGCTT-CATGGA 412
|||||||||||||||||||||||| |||||| |||||||||| ||||| |||| |||||
Sbjct 381 TGAACAGTTTAAGAAGCACGAGGCAAGAGAAAAAGATCTTGAGAAAGT-GCTTAAATGGA 439
Query 413 GACGAGCATTGACCAG-TTTGGCGAG-TATCTCCGGCGATTGTTCATTGAAATGTGAAGA 470
| | ||| ||| || | |||||| || ||||||||||||||||||| | | |||||
Sbjct 440 GGCAAGCGTTGGCC-GCTTTGGC-AGATATCTCCGGCGATTGTTCA--G----GGGAAGA 491
Query 471 TGAATCGAAGCTGGTCGACGAAATTGCTGACAAGATATCAAAAAAGCTGATGATTGTGAC 530
||| ||||||||||| |||| ||| |||||||||||||||||| |||||||||| || ||
Sbjct 492 TGACTCGAAGCTGGTGGACGTAATCGCTGACAAGATATCAAAAGAGCTGATGATAGTTAC 551
Query 531 AACAATAAGCAATGGGAGTAACCTAGTTGGGATTGATAGACACATGAAGGCTCTTAACCG 590
|| ||||||||||||||| ||||||||||||||||||| ||||||||| | ||||||||
Sbjct 552 AAGAATAAGCAATGGGAGGAACCTAGTTGGGATTGATAAACACATGAACGAACTTAACCG 611
Query 591 A-AAATTGGATTTGAATTCCAACAAAGGTTTGAGAGTGGTTGGGATTTGGGCAAGAGGAT 649
| | ||||||||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct 612 ATTGA-TGGATTTGAATTCCAACAAAGGTAAGAGAATGGTTGGGATTTGGGCAAGAGGA- 669
Query 650 ACAA-TGGTAGATCGGCTTTAGCTAAATATGTTTATCAGGAAAT-CTGTCAACACTTTGA 707
|| | ||||||||||| ||||||||||||||||||| || || |||||||||||||||
Sbjct 670 GGAAGTTGTAGATCGGCTCTAGCTAAATATGTTTATCA-GACATCCTGTCAACACTTTGA 728
Query 708 AAGCCATTG-TTTCTTGGGAAGCGTGAAAAGGATTTCACATGGTCGCCAC-TT-ATCG-C 763
|||||||| |||||| |||| ||||||| |||||| || ||| | || || | | |
Sbjct 729 TAGCCATTGTTTTCTT-GGAAACGTGAAACGGATTTGTCAGGGTAACTACTTTGAAAGCC 787
Query 764 ATCTACACGAAGAGTTTCT-GATAAGGATTCAAGGAGAATACGT-GAGTAAACAGAA-TC 820
|||||||| |||||||||| ||||| |||||||||||| || | || ||||| || ||
Sbjct 788 ATCTACACAAAGAGTTTCTGGATAA-TATTCAAGGAGAAAAC-TCTAGCAAACA-AAGTC 844
Query 821 TCAAGAACCAAAAGGTTCTGCTTGTGGCTGATGATGTCAATAAGCTTGAACAGTTAGATG 880
||||||| |||||||||||||||||||| || || ||| |||||||||||||||||||||
Sbjct 845 TCAAGAAGCAAAAGGTTCTGCTTGTGGCAGACGACGTCGATAAGCTTGAACAGTTAGATG 904
Query 881 CTCTTGCAGAGGACTTCAACTCTTTTGGTCCGGGGAGTGTTGTTATTATCACTACACAAG 940
||||||||| ||| |||| | |||||||||||||||||||||||| ||||||||| |||
Sbjct 905 CTCTTGCAGGGGATTTCAGCGGTTTTGGTCCGGGGAGTGTTGTTATCATCACTACAAAAG 964
Query 941 ACAAGCAGCTGTTTG-TTTCTGCTGGTATAAAGCTTGTTTATGAAG-TAGAGCTTTTGAG 998
| |||||| |||| | ||||| ||||||| ||||||| || |||| | ||| ||||||
Sbjct 965 ATAAGCAGTTGTT-GATTTCTTATGGTATACAGCTTGTCTACGAAGCT-GAGTTTTTGAC 1022
Query 999 ATTCCAGAAAGTTTGT-GAA-CTCATCCGAACATTCGCCTTTAAAAAGAGAGAC-A--TT 1053
|||||||||| ||||| | | || ||||| |||| |||||||||||||||||| | ||
Sbjct 1023 ATTCCAGAAATTTTGTCGTAGCT--TCCGATCATTGGCCTTTAAAAAGAGAGACGACATT 1080
Query 1054 TCTGCTGCGTT 1064
|||||||||||
Sbjct 1081 TCTGCTGCGTT 1091
> AT1G72920.1 | Symbols: | Toll-Interleukin-Resistance (TIR) domain
family protein | chr1:27437928-27439091 FORWARD LENGTH=1070
Length=1070
Score = 1057 bits (572), Expect = 0.0
Identities = 656/698 (94%), Gaps = 0/698 (0%)
Strand=Plus/Plus
Query 1 ATGTCTTCTGCTACTGCGACGAAGTACGATGTCTTTCTGAGTTTCAGAGGACTCGACACT 60
||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct 20 ATGTCTTCTCCTACTGCGACTAAGTACGACGTCTTTCTGAGTTTCAGAGGACTCGACACT 79
Query 61 CGTCGCAACTTCATCAGTTTTCTCTACAAAGAATTGGTTCGAAGAAACATTCGTACCTTC 120
||||||||||||||||||||||||||||||||| | ||||||||||| ||||| || |||
Sbjct 80 CGTCGCAACTTCATCAGTTTTCTCTACAAAGAACTCGTTCGAAGAAAAATTCGAACTTTC 139
Query 121 AAACACGACAAGGAGCTTGAGAATGGCCGGAGGATTTCGCCGGAGCTCAAACGCGCCATC 180
||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct 140 AAAGACGACAAGGAGCTCGAGAATGGCCGGAGGATTTCTCCGGAGCTCAAACGCGCCATC 199
Query 181 GAGGAGTCGAAATTCGCCGTCGTTGTTGTCTCTGTGAATTACGCTGCGTCTCCTTGGTGT 240
|||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct 200 GAGGAGTCGAAATTCGCCGTCGTTGTGGTCTCTGTGAACTACGCTGCGTCTCCTTGGTGT 259
Query 241 CTCGATGAGCTCGTGAAGATCATGGATTTCGAAAACAAGGGTTCGATCACTGTGATGCCT 300
||||||||||| |||||||| ||||||||||||||||||||||| ||||| |||||||||
Sbjct 260 CTCGATGAGCTTGTGAAGATTATGGATTTCGAAAACAAGGGTTCCATCACCGTGATGCCT 319
Query 301 ATCTTCTACGGAGTGGATCCGTGTCATTTGAGGAGACAGAGCGGAGATGTCGCTGAACAG 360
||||||||||| |||||||| |||||||||||||| |||| |||||||||||||||||||
Sbjct 320 ATCTTCTACGGCGTGGATCCTTGTCATTTGAGGAGGCAGATCGGAGATGTCGCTGAACAG 379
Query 361 TTTAAGAAGCACGAGGCTAGAGAAGAAGATCTTGATAAAGTAGCTTCATGGAGACGAGCA 420
||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||
Sbjct 380 TTTAAGAAGCACGAGGCTAGAGAAGAAGATCATGAGAAAGTAGCTTCGTGGAGACGAGCA 439
Query 421 TTGACCAGTTTGGCGAGTATCTCCGGCGATTGTTCATTGAAATGTGAAGATGAATCGAAG 480
||||||||||| ||||||||||||||||| |||||||||||||| ||||||||| ||||
Sbjct 440 TTGACCAGTTTAGCGAGTATCTCCGGCGAATGTTCATTGAAATGGGAAGATGAAGCGAAT 499
Query 481 CTGGTCGACGAAATTGCTGACAAGATATCAAAAAAGCTGATGATTGTGACAACAATAAGC 540
||||| ||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||
Sbjct 500 CTGGTGGACGAAATTGCTGACAAGATATCAAAAAATCTGATGACTGTTACAACAATAAGC 559
Query 541 AATGGGAGTAACCTAGTTGGGATTGATAGACACATGAAGGCTCTTAACCGAAAATTGGAT 600
|||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||
Sbjct 560 AATGGGAGGGACCTAGTTGGGATTGATACACACATGAAGGCTCTTAACAAAAAATTGGAT 619
Query 601 TTGAATTCCAACAAAGGTTTGAGAGTGGTTGGGATTTGGGCAAGAGGATACAATGGTAGA 660
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 620 TTGAATTCCAACAAAAGTTTGAGAGTGGTTGGGATTTGGGCAAGAGGATACAATGGTAGA 679
Query 661 TCGGCTTTAGCTAAATATGTTTATCAGGAAATCTGTCA 698
|| ||||||||||||||||||||||| || ||||||||
Sbjct 680 TCAGCTTTAGCTAAATATGTTTATCAAGACATCTGTCA 717
> AT1G72930.1 | Symbols: TIR | toll/interleukin-1 receptor-like
| chr1:27439452-27440464 FORWARD LENGTH=872
Length=872
Score = 490 bits (265), Expect = 1e-137
Identities = 458/547 (84%), Gaps = 29/547 (5%)
Strand=Plus/Plus
Query 1 ATGTCTTCTGC-TACTGCGACGAAGTACGATGTCTTT-CTGAGTTTCAGAGGAC-TCGAC 57
||||||||| | |||||| || ||||| ||||| ||| || ||||||||||| | | |||
Sbjct 25 ATGTCTTCT-CATACTGCAACTAAGTATGATGT-TTTCCTAAGTTTCAGAGGGCAT-GAC 81
Query 58 ACTCGTCGCAACTTCATCAGTTTTCTCTACAAAGAATTGGTTCGAAGAAACATTCGTACC 117
||||| | |||||||||||||||||||||||||||| |||||||||| | |||||| |||
Sbjct 82 ACTCGCCACAACTTCATCAGTTTTCTCTACAAAGAACTGGTTCGAAGGAGCATTCGAACC 141
Query 118 TTCAAACACGACAAGGAGCTTGAGAATGGCCGGAGGATTTCGCCGGAGCTCAAACGCGCC 177
|||||| ||||||| ||||| |||||||||| |||| ||||||||||||||||| || ||
Sbjct 142 TTCAAAGACGACAAAGAGCTGGAGAATGGCCAGAGGTTTTCGCCGGAGCTCAAAAGCCCC 201
Query 178 ATCGAGGAGTCGAA-ATTCGCCGTCGTTGTTGTCTCTGTGAATTACGCTGCGTCTCCTTG 236
||||||| ||| || ||||||||||||||||||||| | ||| || ||||||||| ||||
Sbjct 202 ATCGAGGTGTC-AAGATTCGCCGTCGTTGTTGTCTCAGAGAACTATGCTGCGTCTTCTTG 260
Query 237 GTGTCTCGATGAGCTCGTGAA-GATCATGGATTTCGAAAACAAGGGTTCGATCACTGTGA 295
|||||||||||||||||| || |||||||||||||||||| |||||||| ||||| ||||
Sbjct 261 GTGTCTCGATGAGCTCGT-AACGATCATGGATTTCGAAAAAAAGGGTTCCATCACCGTGA 319
Query 296 TGCCTATCTTCTACGGAGTGGATCCGTGTCATTTGAGGAGACAGAGCGGAG-ATGTCGCT 354
|||| ||||||||||| ||||| ||| |||| ||||| | |||| ||||| | |||||
Sbjct 320 TGCCCATCTTCTACGGCGTGGAACCGAATCATGTGAGGTGGCAGACCGGAGTAC-TCGCT 378
Query 355 GAACAGTTTAAGAAGCACGAGGCTAG-AGAAGAAGATCTTGATAAAGTAGCTTCA-TGGA 412
|||||||||||||| || | || || ||| ||||||| ||| ||||| ||| | ||||
Sbjct 379 GAACAGTTTAAGAA--AC-ATGCGAGTAGA-GAAGATCCTGAGAAAGTT-CTTAAATGGA 433
Query 413 GACGAGCATTGACCAGTTTGGCG-AGTATCTCCGGCGATTGTTCATTGAAATGTGAAGAT 471
| | ||||||||||| ||| ||| | ||||||||||||||||| | |||| |||
Sbjct 434 GGCAAGCATTGACCAATTTTGCGCAAC-TCTCCGGCGATTGTTCA--G----GTGATGAT 486
Query 472 GAATCGAAGCTGGTCGACGAAATTGCTGACAAGATATCAAAAAAGCTGATGATTG-TGAC 530
|| ||||||||||| ||| |||||||| || |||||||||| ||| || |||| || |
Sbjct 487 GACTCGAAGCTGGTGGACAAAATTGCTAACGAGATATCAAACAAGAAGACGATTTATG-C 545
Query 531 AACAATA 537
|||||||
Sbjct 546 AACAATA 552
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 55772805495
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5