BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg908956 Length=732 Score E Sequences producing significant alignments: (Bits) Value AT1G73410.1 | Symbols: ATMYB54, MYB54 | myb domain protein 54 |... 1186 0.0 AT1G17950.1 | Symbols: ATMYB52, BW52, MYB52 | myb domain protei... 398 5e-110 AT5G17800.1 | Symbols: AtMYB56, MYB56 | myb domain protein 56 |... 148 6e-35 > AT1G73410.1 | Symbols: ATMYB54, MYB54 | myb domain protein 54 | chr1:27601632-27603317 FORWARD LENGTH=1231 Length=1231 Score = 1186 bits (642), Expect = 0.0 Identities = 703/733 (96%), Gaps = 2/733 (0%) Strand=Plus/Plus Query 1 ATGATCATGTGCAGCCGAGGCCATTGGAGACCAGCTGAAGACGAGAAGCTCAAGGATCTT 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 221 ATGATCATGTGCAGCCGAGGCCATTGGAGACCAGCTGAAGACGAGAAGCTCAAGGATCTT 280 Query 61 GTCGAACAATACGGTCCTCATAATTGGAACGCCATAGCTCTCAAGCTCCCTGGTCGATCT 120 |||||||||||||||||||| |||||||||||||| ||||||||||| |||||||| ||| Sbjct 281 GTCGAACAATACGGTCCTCACAATTGGAACGCCATTGCTCTCAAGCTTCCTGGTCGCTCT 340 Query 121 GGTAAGAGTTGTAGATTGAGGTGGTTTAATCAATTGGATCCAAGGATAAACCGAAACCCT 180 |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| Sbjct 341 GGTAAGAGTTGTAGATTGAGATGGTTTAATCAATTGGATCCAAGGATCAACCGAAACCCT 400 Query 181 TTCACGGAAGAAGAAGAAGAAAGACTTTTAGCGGCTCATCGGATCCATGGGAACAGATGG 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 401 TTCACGGAAGAAGAAGAAGAAAGACTTTTAGCGGCTCATCGGATCCATGGGAACAGATGG 460 Query 241 TCCATCATCGCAAGGCTTTTCCCTGGAAGAACTGATAACGCCGTCAAGAACCATTGGCAC 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 461 TCCATCATCGCAAGGCTTTTCCCTGGAAGAACTGATAACGCCGTCAAGAACCATTGGCAC 520 Query 301 GTCATCATGGCTCGTCGCACACGTCAAACCTCTAAGCCTCGTCTTCTACCCTCGACGACT 360 ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct 521 GTCATCATGGCTCGTCGCACACGCCAAACCTCTAAGCCTCGTCTTCTTCCCTCGACGACT 580 Query 361 TCGTCTTCTTCTTTAATGGCGAGTGAACAAATCATGATGAGTTCTGGTGGTTATGATCGT 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct 581 TCGTCTTCTTCTTTAATGGCGAGTGAACAAATCATGATGAGTTCTGGTGGTTATAATCAT 640 Query 421 AATTATAGTTCCGGTGATAGGAAGAAAATATTACCAGCAGACGTTATAAATTTCCCTTAC 480 ||||||||||||| |||| ||||||||||||| ||||||||| ||||||||||||||||| Sbjct 641 AATTATAGTTCCGATGATCGGAAGAAAATATTTCCAGCAGACTTTATAAATTTCCCTTAC 700 Query 481 CAGTTCTCTCATATCAATCATCTTCAGTTCCTAAAGGAGTTTTTCACCGGAAAGATCGCT 540 | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 701 AAATTCTCTCATATCAATCATCTTCACTTCCTAAAGGAGTTTTTCACCGGAAAGATCGCT 760 Query 541 TTAAATCACAAAGCAAA-CGAGAGTAAAAAGCCTATGGAGTTCTACAATTTTCTACAAGT 599 ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| Sbjct 761 TTAAATCACAAAGCAAATC-AGAGTAAAAAGCCTATGGAGTTCTACAATTTTCTACAAGT 819 Query 600 AAACACGGATTCAAACAAGCGCGAGACTATAGATCAAGATTCGGGTCAAAGCAAACCCAG 659 |||||| |||||||||||| |||||| ||||||||||||||| ||||||||||||| ||| Sbjct 820 AAACACAGATTCAAACAAGAGCGAGATTATAGATCAAGATTCAGGTCAAAGCAAACGCAG 879 Query 660 TAACTCGGGCACCAAAAATGAAAGTCATGTTCCCTTCTTCGACTTTTTGTCTGTTGGAAA 719 | |||||| ||||||| |||||||||||||||| |||||||||||||| || |||||||| Sbjct 880 TGACTCGGACACCAAACATGAAAGTCATGTTCCATTCTTCGACTTTTTATCCGTTGGAAA 939 Query 720 CTCTGCCTCCTAG 732 ||||||||||||| Sbjct 940 CTCTGCCTCCTAG 952 > AT1G17950.1 | Symbols: ATMYB52, BW52, MYB52 | myb domain protein 52 | chr1:6177617-6179289 FORWARD LENGTH=1123 Length=1123 Score = 398 bits (215), Expect = 5e-110 Identities = 281/313 (90%), Gaps = 4/313 (1%) Strand=Plus/Plus Query 7 ATGTGCAGCCGAGGCCATTGGAGACCAGCTGAAGACGAGAAGCTCAAG-GATCTTGTCGA 65 ||||| || ||||||||||||||||| || |||||||||||||| ||| || || ||||| Sbjct 151 ATGTGTAGTCGAGGCCATTGGAGACCTGCAGAAGACGAGAAGCT-AAGAGAACTCGTCGA 209 Query 66 ACAATACGGTCCTCATAATTGGAACGCCATAGCTCTCAAGCTCCCTGGTCGATCTGGTAA 125 ||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct 210 ACAATTTGGTCCTCATAATTGGAACGCCATAGCTCAGAAGCTCTCTGGTCGATCTGGTAA 269 Query 126 GAGTTGTAGATTGAGGTGGTTTAATCAATTGGATCCAAGGATAAACCGAAACCCTTTCAC 185 ||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||| Sbjct 270 GAGTTGTAGATTGAGATGGTTTAATCAATTGGATCCTAGGATTAACCGAAACCCTTTCAC 329 Query 186 GGAAGAAGAAGAAGAAAGACTTTTAGCGGCTCATCGGATCCATGGGAACAGATGGTCCAT 245 ||| |||||||||||||| ||||||||| |||||||||||||||||||||||||||| | Sbjct 330 GGAGGAAGAAGAAGAAAGGCTTTTAGCGTCTCATCGGATCCATGGGAACAGATGGTCTGT 389 Query 246 CATCGCAAGGCTTTT-CCCTGGAAGAACTGATAACGCCGTCAAGAACCATTGGCACGTCA 304 ||||| || |||| ||| || ||||||||||||| || || |||||||||||||||| Sbjct 390 GATCGCTAGATTTTTTCCC-GGTCGAACTGATAACGCTGTTAAAAACCATTGGCACGTCA 448 Query 305 TCATGGCTCGTCG 317 ||||||||||||| Sbjct 449 TCATGGCTCGTCG 461 Score = 67.6 bits (36), Expect = 2e-10 Identities = 40/42 (95%), Gaps = 0/42 (0%) Strand=Plus/Plus Query 687 TGTTCCCTTCTTCGACTTTTTGTCTGTTGGAAACTCTGCCTC 728 |||||| || |||||||||||||||||||||||||||||||| Sbjct 840 TGTTCCATTTTTCGACTTTTTGTCTGTTGGAAACTCTGCCTC 881 > AT5G17800.1 | Symbols: AtMYB56, MYB56 | myb domain protein 56 | chr5:5877189-5879331 FORWARD LENGTH=1290 Length=1290 Score = 148 bits (80), Expect = 6e-35 Identities = 231/304 (76%), Gaps = 10/304 (3%) Strand=Plus/Plus Query 16 CGAGGCCATTGGAGACCAGCTGAAGACGAGAAGCTCAAGGATCTTGTCGAACAATACGGT 75 ||||| || ||||||||| | ||||| | || |||||||| ||||| | || | ||| Sbjct 335 CGAGGACACTGGAGACCAACAGAAGATGCTAAACTCAAGGAGCTTGTTGCCCAGTTTGGT 394 Query 76 CCTCATAATTGGAACGCCATAGCTCTCAAGCTCCCTGGTCGATCTGGTAAGAGTTGTAGA 135 || || || |||||| || || | | || | |||| |||| || |||||||||||| Sbjct 395 CCCCAAAACTGGAACTTGATTTCTAACCACCTTCTTGGTAGATCAGGCAAGAGTTGTAGA 454 Query 136 TTGAGGTGGTTTAATCAATTGGATCCAAGGATAAAC-CGAAACCCTTTCACGGAAGAAGA 194 ||||| |||||||| ||| | || |||||||| ||| || | || |||||||| ||||| Sbjct 455 TTGAGATGGTTTAACCAACTAGACCCAAGGATTAACAAGAGAGCC-TTCACGGAGGAAGA 513 Query 195 AGAAG-AAAGACTTTTAGCGGCTCATCGGATCC-ATGGGAAC-AGATGGTCCATCATCGC 251 || || || || ||||| ||||||| || || |||| ||| || ||| | | ||| | Sbjct 514 AG-AGTTTAGGCTGTTAGCAGCTCATC-GAGCCTATGGCAACAAG-TGGGCTTTGATCTC 570 Query 252 AAGGCT-TTTCCCTGGAAGAACTGATAACGCCGTCAAGAACCATTGGCACGTCATCATGG 310 | || ||| || || | || |||||||| |||||||||||||||||||||||||||| Sbjct 571 TCGTCTCTTT-CCAGGTCGTACCGATAACGCTGTCAAGAACCATTGGCACGTCATCATGG 629 Query 311 CTCG 314 |||| Sbjct 630 CTCG 633 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 35515541929 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5