BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg909257 Length=1146 Score E Sequences producing significant alignments: (Bits) Value AT1G76370.1 | Symbols: | Protein kinase superfamily protein | ... 1829 0.0 AT1G20650.1 | Symbols: | Protein kinase superfamily protein | ... 717 0.0 > AT1G76370.1 | Symbols: | Protein kinase superfamily protein | chr1:28648449-28650484 REVERSE LENGTH=1602 Length=1602 Score = 1829 bits (990), Expect = 0.0 Identities = 1096/1148 (95%), Gaps = 4/1148 (0%) Strand=Plus/Plus Query 1 ATGAGGTGTTTCTCTTGTCTCAACACGCAAACTAATGACATGAGAATCAACATTGATACC 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 246 ATGAGGTGTTTCTCTTGTCTCAACACGCAAACTAATGACATGAGAATCAACATTGATACC 305 Query 61 CTCTCCGACCTAACCGATTATTCCTCAGTTGCCACAAGAAA-CGATCCAAGAGGGACAGG 119 ||||||||||||||||||||| ||||||||||||||| ||| |||||||||||| ||||| Sbjct 306 CTCTCCGACCTAACCGATTATGCCTCAGTTGCCACAA-AAATCGATCCAAGAGGAACAGG 364 Query 120 GTCAAAATCTGGCATTTTAGTTAATGGGAAAGTGAATAGCCCTAAACCGGGAGGTGGCGC 179 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 365 CTCAAAATCTGGCATTTTAGTTAATGGGAAAGTGAATAGCCCTAAACCGGGTGGTGGCGC 424 Query 180 TCGGAGTTTCACGTTCAAGGAGTTAGCCGCCGCCACCAAGAATTTCCGGGAGGTGAATAT 239 |||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||| Sbjct 425 ACGGAGTTTCACGTTCAAGGAGTTAGCAGCCGCCACGAAGAATTTCCGGGAGGGGAATAT 484 Query 240 GATTGGAAAAGGAGGCTTTGGGAGTGTATACAAGGGACGTTTAGATTCAGGACAAGTGGT 299 || ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 485 TATAGGAAAAGGAGGCTTTGGGAGTGTCTACAAGGGACGTTTAGATTCAGGACAAGTGGT 544 Query 300 GGCGATCAAGCAATTAAATCCAGATGGGCATCAAGGAAATCAAGAATTCATAGTTGAGGT 359 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct 545 GGCGATCAAGCAATTAAATCCAGATGGACATCAAGGAAATCAAGAATTCATAGTTGAAGT 604 Query 360 CTGCATGCTTAGCGTCTTTCATCATCCAAATCTTGTAACTCTAATCGGTTACTGCACTTC 419 ||| |||||||||||||| |||||||||||||| |||||| ||||||||||||| ||||| Sbjct 605 CTGTATGCTTAGCGTCTTCCATCATCCAAATCTAGTAACTTTAATCGGTTACTGTACTTC 664 Query 420 TGGTGCTCAGAGACTT-TTGGTTTATGAATACATGCCAATGGGTAGCTTAGAAGATCATC 478 |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct 665 TGGTGCTCAGAGACTTCTT-GTTTATGAATACATGCCAATGGGTAGCTTAGAAGATCATC 723 Query 479 TTTATGATCTTGAGCCTGATCAGATTCCGCTAAGCTGGTATACCCGAATGAAAATCGCGG 538 ||| |||||||||||||||||||| ||| |||||||||||||| || ||||||||||||| Sbjct 724 TTTTTGATCTTGAGCCTGATCAGACTCCACTAAGCTGGTATACTCGGATGAAAATCGCGG 783 Query 539 TTGGTGCTGCTCGTGGGATTGAGTATCTTCATTGTAAAATAAGCCCATCTGTGATTTACC 598 ||||||| ||||||||||| |||||||| || |||||||||||||| ||||||||||||| Sbjct 784 TTGGTGCAGCTCGTGGGATAGAGTATCTCCACTGTAAAATAAGCCCGTCTGTGATTTACC 843 Query 599 GTGATTTGAAATCCGCAAACATTTTGTTAGATAAAGAATTTAGCGTCAAACTCTCTGACT 658 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct 844 GTGATTTGAAATCCGCAAACATTTTGTTAGATAAAGAATTTAGCGTCAAGCTCTCTGATT 903 Query 659 TTGGACTCGCCAAGGTCGGTCCTGTGGGGAACCGGACACATGTGTCCACTCGAGTCATGG 718 |||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||| Sbjct 904 TTGGACTCGCTAAGGTTGGTCCTGTGGGGAACCGGACACATGTGTCGACTCGAGTCATGG 963 Query 719 GTACTTACGGATACTGTGCTCCAGAATATGCAATGAGCGGAAGATTAACCATTAAGTCGG 778 |||||||||||||||||||||||||||| ||||||||||||||||| || || || |||| Sbjct 964 GTACTTACGGATACTGTGCTCCAGAATACGCAATGAGCGGAAGATTGACTATAAAATCGG 1023 Query 779 ATATCTATAGCTTCGGTGTAGTGTTGCTTGAACTGATTTCTGGCAGGAAGGCCATTGATT 838 ||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||| Sbjct 1024 ATATCTATAGCTTTGGTGTAGTGTTGCTTGAGCTTATTTCTGGCAGGAAGGCCATTGATT 1083 Query 839 TGAGTAAACCAAACGGAGAGCAGTACCTTGTTGCTTGGGCTCGACCGTATCTCAAGGATC 898 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| Sbjct 1084 TGAGTAAACCAAACGGAGAGCAGTACCTTGTTGCTTGGGCTAGACCGTATCTCAAAGATC 1143 Query 899 CTAAGAAATTTGGACTTCTAGTTGACCCGTTGCTACGGGGAAAGTTCTCGAAGAGGTGTC 958 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1144 CTAAGAAATTTGGACTTCTAGTTGACCCGTTGCTACGGGGAAAGTTCTCGAAGAGGTGTC 1203 Query 959 TTAACTACGCGATTGCTATAACCGAGATGTGCCTAAATGACGAAGCGAATCACCGGCCAA 1018 |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| Sbjct 1204 TTAACTACGCGATTTCTATAACCGAGATGTGCCTAAACGACGAAGCGAATCACCGGCCAA 1263 Query 1019 AAATAGGAGATGTGGTGGTGGCATTTGAGTACATAGCCTCTCAGAGCAAATCTTATGAAG 1078 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1264 AAATAGGAGATGTGGTGGTGGCATTTGAGTACATAGCCTCTCAGAGCAAATCTTATGAAG 1323 Query 1079 ATCGAAGAGCGGCTCGCAAGTCTACGGACTCTAACCGGTTAAGAGGGGAAACAAAACAGA 1138 |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1324 ATCGAAGAACGGCTCGCAAGTCTACGGACTCTAACCGGTTAAGACGGGAAACAAAACAGA 1383 Query 1139 GTTACTAA 1146 |||| ||| Sbjct 1384 GTTATTAA 1391 > AT1G20650.1 | Symbols: | Protein kinase superfamily protein | chr1:7158244-7160526 REVERSE LENGTH=1828 Length=1828 Score = 717 bits (388), Expect = 0.0 Identities = 804/1002 (80%), Gaps = 40/1002 (4%) Strand=Plus/Plus Query 103 GATCCAAGAGGGACAGGGTCAAAATCTGGCATTTTAGTTAATGGGAAAGTGAATAGCCCT 162 ||| ||| ||| |||| ||| | || || || ||||| ||||| ||||||||||| || Sbjct 616 GATACAACAGGAACAGAGTCGATTTCGGGTATCTTAGTAAATGGTAAAGTGAATAGTCCG 675 Query 163 AAACCGGGAGGTGGCGCTCGGAGTTTCACGTTCAAGGAGTTAGCCGCCGCCACCAAG-AA 221 | ||| || ||||| |||||||| |||||||||||||||||||| || || | |||| || Sbjct 676 ATACCTGGTGGTGGAGCTCGGAGCTTCACGTTCAAGGAGTTAGCTGCAGCTA-CAAGAAA 734 Query 222 TTTCCGGGAGGTGAATATGATTGGAAAAGGAGGCTTTGGGAGTGTATACAAGGGACGTTT 281 |||||||| || ||| || | ||| ||||||| ||||| || || || ||||||||||| Sbjct 735 CTTCCGGGAAGTTAATTTGCTCGGAGAAGGAGGTTTTGGCAGAGTTTATAAGGGACGTTT 794 Query 282 AGATTCAGGACAAGTGGTGGCGATCAAGCAATTAAATCCAGATGGGCATCAAGGAAATCA 341 ||||||||||||||| ||||| || |||||||| ||||||||||||| |||||| || | Sbjct 795 AGATTCAGGACAAGTAGTGGCTATTAAGCAATTGAATCCAGATGGGCTTCAAGGGAACCG 854 Query 342 AGAATTCATAGTTGAGGT-CTGCATGCTTAGCGTCTTTCATCATCCAAATCTTGTAAC-T 399 ||| || ||||| || || || ||||||||| | || |||||||| ||||| || || | Sbjct 855 AGAGTTTATAGTAGAAGTTCTT-ATGCTTAGCTTATTGCATCATCCCAATCTCGTTACAT 913 Query 400 CTAATCGGTTACTGCACTTCTGGTGCTCAGAGACTT-TTGGTTTATGAATACATGCCAAT 458 | ||||||||||| |||||||||| ||| |||||| ||| | ||||||||||||||||| Sbjct 914 -TGATCGGTTACTGTACTTCTGGTGATCAAAGACTTCTTG-TCTATGAATACATGCCAAT 971 Query 459 GGGTAGCTTAGAAGATCATCTTTATGATCTTGAGCCTGATCA-GATTCCGCTAAGCTGGT 517 ||| |||||||||||||| |||| |||||||||| || |||| || || |||||||| Sbjct 972 GGGAAGCTTAGAAGATCACCTTTTTGATCTTGAGTCTAATCAAGAA-CCATTAAGCTGGA 1030 Query 518 ATACCCGAATGAAAATCGCGGTTGGTGCTGCTCGTGGGATTGAGTATCTTCATTGTAAAA 577 |||| ||||||||||||||||||||||| ||||| || || ||||||||||| || | | Sbjct 1031 ATACTCGAATGAAAATCGCGGTTGGTGCAGCTCGAGGAATAGAGTATCTTCACTGCACAG 1090 Query 578 -TAAGCCCATCTGTGATTTACCGTGATTTGAAATCCGCAAACATTTTGTTAGATAAAGAA 636 ||| ||| | |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1091 CTAA-CCCGCCAGTGATTTACCGTGATTTGAAATCCGCAAACATATTGTTAGATAAAGAG 1149 Query 637 TTTAGCGTC-AAA-CTCTCTGACTTT-GGACTCGCCAAGGTCGGTCCTGTGGG-GAACCG 692 || || || ||| ||||| || ||| ||| | || || ||||||| || || || | | Sbjct 1150 TTCAG--TCCAAAACTCTCGGA-TTTCGGATTGGCGAAACTCGGTCCAGTTGGTGATC-G 1205 Query 693 GACACATGTGTCCACTCGAGTCATGGGTACTTACGGATACTGTGCTCCAGAATATGCAAT 752 || ||||| || ||||| |||||||| |||||||| ||||||||||| ||||| ||||| Sbjct 1206 AACTCATGTATCGACTCGTGTCATGGGAACTTACGGTTACTGTGCTCCTGAATACGCAAT 1265 Query 753 GAGCGG-AAGATTAACCATTAAGTCGGATATCTA-TAGCTTCGGTGTAGTGTTGCTTGAA 810 |||||| || |||||| |||| ||||||||||| | |||||||||||||||||||||| Sbjct 1266 GAGCGGGAA-ATTAACTGTTAAATCGGATATCTACT-GCTTCGGTGTAGTGTTGCTTGAG 1323 Query 811 CTGATTTCTGGCAGGAAGGCCATTGATTTGAG-T-AAAC-CAAACGGAGAGCAGTACCTT 867 |||||| |||| || || || |||||||| || | ||| ||| || |||||| | ||| Sbjct 1324 CTGATTACTGGGAGAAAAGCTATTGATTT-AGGTCAAAAGCAA--GGCGAGCAGAATCTT 1380 Query 868 GTTGCTTGGGCTCGACCGTATCTCAAGGATCCTAAGAAATTTGGAC-TTCTAGTTGACCC 926 ||| ||||| | || || || |||||||||| ||||| ||||||| || |||| || || Sbjct 1381 GTTACTTGGTCACGTCCATACCTCAAGGATCAGAAGAAGTTTGGACATT-TAGTGGATCC 1439 Query 927 GT-TGCTACGGGGAAAGTTCTCGAAGA-GGTGTCTTAA-CTACGCGATTGCTATAACCG- 982 || | ||||| ||||| | | | |||| ||||| |||| ||| |||||||| || | | Sbjct 1440 GTCT-CTACGAGGAAAATACCC-AAGACGGTGT-TTAAACTATGCGATTGCGATTATTGC 1496 Query 983 AGATGTGCCTAAATGACGAAGCGAATCACCGGCCAAAAATAGGAGATGTGGTGGTGGCAT 1042 | ||||| || ||||| ||||| || | || || ||||| || | || |||||| Sbjct 1497 A-ATGTGTCTTAATGAAGAAGCTCATTATCGACCGTTCATAGGTGACATAGTTGTGGCAC 1555 Query 1043 TTGAGTACATAGCCTCTCAGAGCAAATCTTATGAAGATCGAA 1084 | |||||| ||||| | ||||||| |||| |||||| ||||| Sbjct 1556 TAGAGTACTTAGCCGCACAGAGCAGATCTCATGAAGCTCGAA 1597 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 56224610400 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5