BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg909571
Length=2352
Score E
Sequences producing significant alignments: (Bits) Value
AT1G79400.1 | Symbols: ATCHX2, CHX2 | cation/H+ exchanger 2 | c... 3784 0.0
AT1G16380.1 | Symbols: ATCHX1, CHX1 | Cation/hydrogen exchanger... 1314 0.0
> AT1G79400.1 | Symbols: ATCHX2, CHX2 | cation/H+ exchanger 2 |
chr1:29864992-29867840 FORWARD LENGTH=2352
Length=2352
Score = 3784 bits (2049), Expect = 0.0
Identities = 2255/2356 (96%), Gaps = 8/2356 (0%)
Strand=Plus/Plus
Query 1 ATGGATCCAAAGTTGTTGTTTTGCTTACCTCAAGGAGATGAACTCTTTAATCCCCTTAAT 60
|||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||
Sbjct 1 ATGGATCCAAAGTTGTTGCTTTGCTTACCTCAAGGAGATGAACTGTTTAATCCCCTTAAT 60
Query 61 ACCATGTTTATTCAAATGGCTTGCATTCTCGTCTTCTCTCAATTGTTCTATCTCCTTCTT 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 61 ACCATGTTTATTCAAATGGCTTGCATTCTCGTCTTCTCTCAATTGTTTTATCTCCTTCTT 120
Query 121 AAACCCTGTGGCCAAGCTGGTCCCGTTGCCCAGATTCTTGCTGGGATTGTGTTGAGTCCT 180
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 AAACCCTGCGGCCAAGCTGGTCCCGTTGCCCAGATTCTTGCTGGGATTGTGTTGAGTCCT 180
Query 181 GTTCTGCTCTCAAGAATATCTAAAGTTAAGGAATTTTTCCTCCAGAAAAACGCAGCAGAT 240
||| |||||||||||||| |||||||||||||||| |||||||||||||| |||||||||
Sbjct 181 GTTTTGCTCTCAAGAATACCTAAAGTTAAGGAATTCTTCCTCCAGAAAAATGCAGCAGAT 240
Query 241 TATTACTCTTTCTTCTCGTTCGCTCTACGGACATCTTTCATGTTCTTGATTGGTCTTGAA 300
|||||||| |||||||| |||||| ||||||||||||||||||||||||| |||||||||
Sbjct 241 TATTACTCCTTCTTCTCCTTCGCTTTACGGACATCTTTCATGTTCTTGATCGGTCTTGAA 300
Query 301 GTGGATCTACATTTCATGAGAAGGAATTTCAAGAAAGCTGCCGTGATAACCTTGAGCTCA 360
||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct 301 GTGGATCTACATTTCATGAGAAGAAATTTCAAGAAAGCTGCGGTGATAACCTTGAGCTCA 360
Query 361 TTCTTGGTTTGCGCCCTCCTCAGTTTCGCTTCCTTAATGTTATTCATCCCTTTGTTTGGG 420
||| |||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 361 TTCGTGGTTTCCGGCCTCCTCAGTTTCGCTTCCTTAATGTTATTCATCCCTTTGTTTGGG 420
Query 421 ATCAAAGAAGACTACTTTACGTTTTTCTTGGTTCTTCTCGTTACCTTGACTAACACGGCA 480
||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 421 ATCAAAGAAGATTACTTTACGTTTTTCTTGGTTCTTCTCGTTACCTTGTCTAACACGGCA 480
Query 481 TCTCCTGTCGTAGTCCGTTCAATCGCTGATTGGAAACTCAACACATCTGAGATCGGACGA 540
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 481 TCTCCTGTCGTAGTCCGTTCAATCGCTGATTGGAAACTCAACACATGTGAGATCGGACGG 540
Query 541 CTGACAATCTCATGTGCGTTGTTCATCGAATTATCAAACGTGGTTCTCTACACTGTAATC 600
||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct 541 CTGACAATCTCATGTGCGTTGTTCATCGAATTAACAAACGTGGTTCTCTACACTATAATC 600
Query 601 ATCGCGTTCATCTCTGGATCTATGATAGGT-ACTCTCTTCCTCTTTCTTTTCGCAACCGG 659
|| ||||||||||||||| |||| ||| | | |||||| | |||||||| |||||||
Sbjct 601 ATGGCGTTCATCTCTGGAACTATCATACTTGA-ACTCTTCTTGTTTCTTTTGGCAACCGT 659
Query 660 ATCCCTAATCTTGATCAACAGT-TTCTTAGCTCCATGGCTTCCAAAGAGGAACCCTAAAG 718
| ||||||| |||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct 660 AGCCCTAATATTGATCAACA-TGGTCTTAGCTCCATGGCTTCCAAAGAGGAACCCTAAAG 718
Query 719 AGAAGTACCTCTCAAAGGCTGAAACTCTAGTTTTCTTCATCTTCCTTCTCATCATCGGTA 778
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 719 AGAAGTACCTCTCAAAGGCTGAAACTTTAGTTTTCTTCATCTTCCTTCTCATCATCGGTA 778
Query 779 TAACTATCGAATCCTACGATGTCAATTCCTCGGTTTCGGTTTTCACCATTGGAATAATGT 838
|||||||||||||||||||||| |||||||||||||| |||||| ||||||| |||||||
Sbjct 779 TAACTATCGAATCCTACGATGTAAATTCCTCGGTTTCTGTTTTCGCCATTGGCATAATGT 838
Query 839 TTCCACGACAAGGAAAGACTCACAGAACGTTGATTCAACGGCTTAGTTATCCGATCCACG 898
|||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||
Sbjct 839 TTCCACGACAAGGAAAGACTCACAGAACGTTGATACAACGGCTTAGTTACCCGATTCACG 898
Query 899 AGTTTGTTCTTCCCGTTTACTTTGGTTACATTGGATTCAGATTCAGCATCATCGCGTTAA 958
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 899 AGTTTGTTCTTCCGGTTTACTTTGGTTACATTGGATTCAGATTCAGCATCATCGCGTTAA 958
Query 959 CCAAACGATTTTACCTCGGTCTAGTTATTATAGTAATTGTAACCATAGTTGGGAAATTTA 1018
||||||| |||||||||||| |||||||||| || ||||||||||||| |||||||||||
Sbjct 959 CCAAACGCTTTTACCTCGGTATAGTTATTATCGTGATTGTAACCATAGCTGGGAAATTTA 1018
Query 1019 TTGGTGTAATAAGCGCTTGTATGTACCTGAAGATCCCTAAGAAGTATTGGCTTTTCTTAC 1078
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1019 TTGGTGTAATAAGCGCTTGTATGTACCTGAAGATCCCTAAGAAATATTGGCTTTTCTTAC 1078
Query 1079 CCACCATTCTCTCTGTTAAAGGCCATGTGGGTCTTCTTCTTCTAGACTCAAACTACTCCG 1138
|||||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||
Sbjct 1079 CCACCATTCTCTCTGTTAAAGGCCATGTCGGTCTTCTTCTTCTAGACTCCAACTATTCCG 1138
Query 1139 AAAAGAAATGGTGGACCACAACTATTCATGATATGATGGTGGCTGCTTTGGTGATCACGA 1198
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1139 AAAAGAAATGGTGGACCACAACTATTCATGATATGATGGTGGCTGCTTTGGTGATAACGA 1198
Query 1199 CGCTAGTAAGCGGTGTTCTGGCGTCGTTCTTGCTTAAAGCAAGAGAGAAGGACTTTGCTT 1258
|||||||||| ||||||||||| || |||||||||||| |||||||||||||||||||||
Sbjct 1199 CGCTAGTAAGTGGTGTTCTGGCATCTTTCTTGCTTAAAACAAGAGAGAAGGACTTTGCTT 1258
Query 1259 ACGAGAAGACTTCGCTTGAATCTCACAACACGAACGAGGAATTACGCGTTTTATCATGCG 1318
||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||| ||||
Sbjct 1259 ACGAGAAGACTTCGCTTGAGTCTCATAACACGAACGAGGAATTACGCATTTTATCGTGCG 1318
Query 1319 CCTATGGAGTCCGTCATGCTCGCGGTGCGATCTCTCTTGTCTCGGCCTTGAGCGGTTCTC 1378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1319 CCTATGGAGTCCGTCATGCTCGCGGTGCGATCTCTCTTGTCTCGGCCTTGAGCGGTTCTC 1378
Query 1379 GTGGAGCCTCTGATCCGTTCACACCTCTGCTTATGCACCTTGTACCCCTCCCCAAGAAAC 1438
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1379 GTGGAGCCTCTGATCCGTTTACACCTCTGCTTATGCACCTTGTACCCCTCCCCAAGAAAC 1438
Query 1439 GAAAATCGGAATTGATGTATCATGAACACGACGAAGATGGAGGCAATGCGAATGGAGATG 1498
||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1439 GAAAATCGGAACTGATGTATCATGAGCACGACGAAGATGGAGGCAATGCGAATGGAGATG 1498
Query 1499 ACGAATTTGGGACCAACGAAGGTTTAGAGATCAACGATTCGATTGATTCGTTTGCCAAAG 1558
||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1499 ACGAATTCGGGACCAACGAAGGTTTAGAGATCAACGATTCGATTGATTCGTTTGCTAAAG 1558
Query 1559 ACAGCAAAATCTTGATCCAACAAGTGAAACTCGTGACGCAGATGCTTAATATGCACGAAG 1618
|||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct 1559 ACAGCAAAATCTTGATCCAACAAGTGAAGCTCGTGACTCAGATGCTTAATATGCACGAAG 1618
Query 1619 AGATATGTAACGCAACAGAGGATCTTCGAGTTTCGATTGTGTTTCTTCCGTTTCATAAAC 1678
|||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct 1619 AGATCTGTAACGCAACAGAGGATCTTCGAGTTTCCATTGTATTTCTTCCGTTTCATAAAC 1678
Query 1679 ACCAGAGAATCGATGGGAAGACTACAAACGATGGGGAACTTTTCAGACAGATGAACCGTA 1738
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1679 ACCAGAGAATCGATGGGAAGACTACAAACGATGGGGAACTGTTCAGACAGATGAACCGTA 1738
Query 1739 ATGTTCTAAGGCACGCTCCGTGTTCGATTGGTATTTTTGTGGACCGAAACATAACCGGAT 1798
||||||||||||||| ||||||||| ||||| |||||||||||||| |||||||||||||
Sbjct 1739 ATGTTCTAAGGCACGGTCCGTGTTCCATTGGCATTTTTGTGGACCGTAACATAACCGGAT 1798
Query 1799 TTCAGCAGCCGCACGGGTTTGATTCTGTACAACACGTCGCAG-CATTGTTCTTTGGTGGT 1857
|||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct 1799 TTCAGCAGCCGCACGGGTTTGATTCTGTACAACACGTCGC-GACATTGTTCTTTGGTGGT 1857
Query 1858 CCGGATGATCGTGAGGCTCTTGCTCTGTGCAAG-TGGCTCGCGAACAACACTCTGATTCA 1916
|||||||||||||||||||||||||||||| || ||||||||||| || |||||||||||
Sbjct 1858 CCGGATGATCGTGAGGCTCTTGCTCTGTGC-AGATGGCTCGCGAATAATACTCTGATTCA 1916
Query 1917 TCTCACAGTTATACAGTTCGTATCCGAGGAATCAAAGGCAGAGACTCCTGTTGGAAATGC 1976
|||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct 1917 TCTCACAGTTATACAGTTTGTCTCCGAGGAATCAAAGGCAGAGACTCCTGTTGGAAATGC 1976
Query 1977 GATGACACGAGATAATAAAGAGGTTTTCATGGAAGTTCTGGGAAGGAATCAAACTGAACA 2036
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1977 TATGACACGAGATAATAATGAGGTTTTCATGGAAGTTCTGGGAAGGAATCAAACTGAACA 2036
Query 2037 AGAAACAGATCGGAGCTTCTTAGAAGAATTCTATAACAGATTTGTAACGACGGGACAAGT 2096
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 2037 AGAAACAGATCGGAGCTTCTTAGAAGAATTCTATAACAGATTTGTAACAACGGGACAAGT 2096
Query 2097 GGGGTTCATAGAGAAGCTTGTGAGCAATGGACCGCACACGCTGACGATTCTAAGAGAGAT 2156
|||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||
Sbjct 2097 GGGGTTCATAGAGAAGCTAGTGAGCAATGGACCGCATACGCTGACTATTCTAAGAGAGAT 2156
Query 2157 TGGAGAGATGTATTCACTGTTTGTGGTCGGAAAGAGCAGAGGAGATTGCCCTATGACGGT 2216
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 2157 TGGAGAGATGTATTCACTGTTTGTGGTCGGAAAGAGCACAGGAGATTGCCCTATGACGGT 2216
Query 2217 GAGAATGAAAGATTGGGAAGAGTGTCCGGAGCTCGGAACTGTCGGTGATTTCTTGGCTTC 2276
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2217 GAGAATGAAAGATTGGGAAGAGTGTCCGGAGCTTGGAACTGTCGGTGATTTCTTGGCTTC 2276
Query 2277 GTCTTTAGATGTAAATGCGTCAGTATTAGTAGTTCAAAGACAAAGACATTCACATGATAG 2336
|||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||
Sbjct 2277 GTCTTTAGATGTAAATGCTTCTGTATTAGTAGTTCAAAGACAGAGACATTCACATGATAG 2336
Query 2337 CTTTATAGATGATTAG 2352
||||||||||||||||
Sbjct 2337 CTTTATAGATGATTAG 2352
> AT1G16380.1 | Symbols: ATCHX1, CHX1 | Cation/hydrogen exchanger
family protein | chr1:5598453-5601367 REVERSE LENGTH=2358
Length=2358
Score = 1314 bits (711), Expect = 0.0
Identities = 1886/2434 (77%), Gaps = 158/2434 (6%)
Strand=Plus/Plus
Query 1 ATGGATCCAAAGTTGTTGTTTTGCTTACCTCAAGGAGATGAACTCTTTAATCCCCTTAAT 60
|||||||||||| |||||||||| || || ||||||||| | | |||||||| || |||
Sbjct 1 ATGGATCCAAAGATGTTGTTTTGTTTGCCAGAAGGAGATGCATTGTTTAATCCACTCAAT 60
Query 61 ACCATGTTTATTCAAATGGCTTGCATTCTCGTCTTCTCTCAATTGTTCTATCTCCTTCTT 120
|| ||||||||||||||||||||||||||||||||||||||||| ||||| || ||| |
Sbjct 61 ACAATGTTTATTCAAATGGCTTGCATTCTCGTCTTCTCTCAATTCTTCTACCTA-TTCCT 119
Query 121 AAA-CCCTGTGGCCAAGCTGGTCCCGTTGCCCAGATTCTTGCTGGGATTGTGTTGAGTCC 179
||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct 120 AAAACCCTGTGGCCAAGCCGGTCCCGTTGCCCAGATTCTCGCTGGGATTGTGTTGAGT-- 177
Query 180 TGTTCTGCTCTCAAGAATAT-CTAAAGTTAAGGAATTTTTCCTCCAGAAAAACGCAGCA- 237
| | |||| ||| ||| | ||||| | |||||||||||||||||| | |||||
Sbjct 178 T-T---GCTCACAATAATCCGC-AAAGTCCACGAATTTTTCCTCCAGAAAGATTCAGCAA 232
Query 238 GATTATTAC-TCTTTCTTCTCGTTCGCTCT-ACGGACATC-TTTCATGTTCTTGATTGGT 294
| | ||||| ||||| ||||| ||| || | ||| ||| | ||| |||||||||| |||
Sbjct 233 GCT-ATTACATCTTT-TTCTCATTC-CTTTTACGAACAGCCTTTG-TGTTCTTGATCGGT 288
Query 295 CTTGA-AGTGGATCTACATTTCATGAGAAGGAAT-TTCAAGAAAGCTGCCGT-G--ATAA 349
|| || | | ||||| | ||||||| || ||| || ||||| || || | | ||||
Sbjct 289 CTCGAGA-TCGATCTTGACTTCATGA-AACGAAACTTGAAGAA--CT-CCATTGTCATAA 343
Query 350 CCTTGAGCTCATTCTTGGTTTGC-GCCCTCCTCAGTTTCGCTT-CCT-TAATGTTATTCA 406
| ||| |||| || | ||| | | | || || | || ||| ||| | | || | ||
Sbjct 344 CTTTGGGCTCCTTAGTCATTT-CTGGCATCATCTGGCTCCCTTTCCTCTGGT-TTCT-CA 400
Query 407 TCCCTTTGTTTGG-GATCAAAGAAGACTACTTTACGTTTTTCTTGGTTCTTC-TCGTTAC 464
||| ||| | | |||||||| || | ||| || |||| ||| | |||| || ||||
Sbjct 401 TCCGTTTCAT-GCAGATCAAAGGCGATTTCTTAACATTTTACTTAGC-CTTCCTCATTAC 458
Query 465 CTTGACTAACACGGCATCTCCTGTCGT-AGTCCGTTCAATCG-CTGATTGGAAACT-CAA 521
|||| | ||||||||| |||||||||| | ||||||| ||| | ||||||||||| ||
Sbjct 459 CTTGTCCAACACGGCAGCTCCTGTCGTCA-TCCGTTCGATCATC-GATTGGAAACTGCA- 515
Query 522 CACATCTGAGATCGGACGACT-GACAATCTCATGTGCG-TTGTTCATCGA-ATTATCAAA 578
|||||||||||||||||| || | |||||||||| | | |||||||| || || | |||
Sbjct 516 CACATCTGAGATCGGACGGCTAG-CAATCTCATGCG-GATTGTTCATAGAGATAACCAA- 572
Query 579 CGTGGTTCTCTACACTGTAATCATCGCGTTCATCTCTGG-ATCTATGA-TAGGT-ACTCT 635
| | || |||||||| | || | | |||||||| || | |||||| | | | | | |
Sbjct 573 CATATTTATCTACACTATCGTCCTTTCTTTCATCTCCGGGA-CTATGACT-GCTGA-TAT 629
Query 636 CTTCCTCTT-TCTTTTCGCAACCGGA-TCCCTAATCTTGA-TCAACAGTTTCTTAGCTCC 692
|| ||| || ||| || || ||| | ||||||||| | || || ||||||||| |
Sbjct 630 TTTTATCTACTCATTT-GCCACAGGAGTTA-TAATCTTGACT-AATAGATTCTTAGCTTC 686
Query 693 ATGGCTTCCAAAGAGGAACCCTAAAGAGAAGTACCTCTC-AAAGGCTGAAACTCTAGTTT 751
|||||| ||||| || |||||||||||||| || ||||| |||| ||||||| || | ||
Sbjct 687 ATGGCTCCCAAAAAGAAACCCTAAAGAGAAATATCTCTCCAAAG-CTGAAACGCTTGCTT 745
Query 752 TCTTCATC-TTCCTTCTCATCATCG-GTATAACTATCGAATCCTA-CGA-TGTCAATTCC 807
|| ||||| || |||| ||||||| || |||| ||||||||| | | | | | || ||
Sbjct 746 TCATCATCCTTA-TTCTAATCATCGCGT-TAACCATCGAATCC-AGCAACT-TAAACTCA 801
Query 808 TCGGTTTCGGT-TTTCACCATTGGAATAATGTTTCCACGACAAGGAAAGACTCACAGAAC 866
|| ||| || ||| | ||| ||| ||||||||||| || ||||||| ||| |||||||
Sbjct 802 ACGCTTTTTGTGTTT-ATCATCGGATTAATGTTTCCAAGAGAAGGAAAAACTTACAGAAC 860
Query 867 GTTGATTCAACGGCTT-AGTTATCCGATCCACGAGTTTGTTCTTCCCGTTTACTTTGGTT 925
|||||| |||||| || ||||| ||||| ||||||||||| ||||| |||||||||||||
Sbjct 861 GTTGATCCAACGG-TTGAGTTACCCGATTCACGAGTTTGTCCTTCCGGTTTACTTTGGTT 919
Query 926 ACATTGGATTCAGATTCAGCATCA-TCGCGTTAACCAAACGATTTTACCTCGGTC-TAGT 983
|||| ||||| ||||||||| ||| | ||||||||||||| ||||||| || | |
Sbjct 920 ACATCGGATTTAGATTCAGCGTCAATT-CGTTAACCAAACGCCACTACCTCG-TCCTTGG 977
Query 984 TATTA-TAGTAA-TTGTAA-CCATAGTTGGGAAATTTATTGGTGTAATAAGCGCTTGT-- 1038
||| | | || || ||| || || | ||||| || | || || || |||||||
Sbjct 978 TATGACT-GTGGCTT-TAAGCC-TACTGGGGAAGCTTCTAGGAGTTTTATTCGCTTGTTC 1034
Query 1039 ATGTACCTGAAGATCCCTAAGAAGTATTGGCTTTTCTTACCCACCATTCTCTCTGTTAAA 1098
|| | | |||||||||| ||| |||||||||||||||| | ||||| || || || |||
Sbjct 1035 AT-T-CTTGAAGATCCCAAAGCAGTATTGGCTTTTCTTGTCAACCATGCTTTCCGTCAAA 1092
Query 1099 GGCCATGTGGGTCTTCTTCTTCTAGACTCAAACT--ACTCCGAA-AAGAAATGGTGGAC- 1154
|| ||| | |||||| ||||||| ||||| |||| | | | | |||||||||| ||
Sbjct 1093 GGTCATATAGGTCTTGTTCTTCTCGACTCTAACTTGA-T--GTACAAGAAATGGTTTACT 1149
Query 1155 CACAACTA-TTCATGATATGATGGTGGCTGCTTTGGTGATCACGACGCTAGT-AAGCGGT 1212
| | || ||||||||||| | || || ||| | ||||||| ||| | || ||||||
Sbjct 1150 C-CGG-TAGTTCATGATATGTTCGTTGCGGCTCTAGTGATCATGACTTT-GTTAAGCGGA 1206
Query 1213 GTTCTGGCGTCGTTCTTGCTTA-AAG-CAAGAGAGAAGGACTTT-GCTTACGAGAAGA-C 1268
||| | | || || ||||||| ||| ||||| | ||| | ||| || | | || | |
Sbjct 1207 GTTATAACATCTTTGTTGCTTAGAAGTCAAGA-A-AAG-AGTTTCGCACAT-ATAAAAAC 1262
Query 1269 TTCGCTTGAATC-TCACAACACGAACGAGGAATTACGCGTTTT-ATCATGCGCCTATGGA 1326
|| ||||| | | | ||| | |||||| |||| || || | | |||| ||||||
Sbjct 1263 ATCACTTGAGTTATTTGA-CACTACCGAGGAGCTACGAGTGTTGA-CGTGCGTCTATGGC 1320
Query 1327 GTCCGTCATGCTCGCGG-TGCGATCTCTCTT-GTCTCGGC-CTTGAGCGG-TT--CTCGT 1380
|| ||||||||||| || | |||||||| || ||||| || || || || || ||| |
Sbjct 1321 GTTCGTCATGCTCGTGGAT-CGATCTCT-TTAGTCTCTGCTCTA-AGTGGCTTTTCTCCT 1377
Query 1381 GGAGCCTCTGAT-C-C-GTTCACACCTCTGC-TTATGCACCTTGTACCCCTCCCCAAGAA 1436
||| | ||| | | | |||||| ||| | | |||||||||| |||| ||||| |||||
Sbjct 1378 GGAACTTCTTCTTCGCCGTTCACGCCT-TACCTTATGCACCTCATACCGCTCCCGAAGAA 1436
Query 1437 ACG-AAAATCGGAATTGATGTATCATGAAC-ACGACGAAGATGGAGGCAATGCGAATGGA 1494
|| |||| | |||||| |||| || ||| | |||||||||| ||| ||| | || ||
Sbjct 1437 GCGGAAAA-CTGAATTGTTGTACCACGAATTA-GACGAAGATGCAGGAAATTCCAACGGC 1494
Query 1495 G-ATGACGA--ATTT-GGGACCAACGAAGGTTTAGAGATCAACGATTCGATTGATTCGTT 1550
| | ||||| | || ||||| || ||||| |||||||||| || ||||| ||||||||
Sbjct 1495 GGA-GACGATGAGTTCGGGACTAATGAAGGACTAGAGATCAATGACTCGATCGATTCGTT 1553
Query 1551 TGCCAAAGACAGCAAAATCTTGATCCAACAAGTGAAACTCGTGACGCAGATGCTTAATAT 1610
| | | |||||| ||||| || ||| || |||||||| ||| ||| |||| |||||
Sbjct 1554 TACTAGAGACAGAAAAATAATGGTCCGGCAGGTGAAACTTGTGGCGCCGATGGAGAATAT 1613
Query 1611 GCACGAAGAGATATGTAACGCAACAGAGGATCTTCGAGTTTCGATTGTGTTTCTTCCGTT 1670
|||||||||||| |||||||| || || |||||||| || ||||| |||||||| || ||
Sbjct 1614 GCACGAAGAGATCTGTAACGCCACTGAAGATCTTCGTGTATCGATCGTGTTTCTACC-TT 1672
Query 1671 TC-ATAAACACCAGAGAATCGATGGGAAGACTACAAACGATGGGGAACTTTT-CAGACAG 1728
|| ||||||||||||| ||||| ||||| || || || || |||||| |||| | ||||
Sbjct 1673 TCCATAAACACCAGAGGATCGACGGGAAAACCACGAATGACGGGGAAGTTTTTC-GACAT 1731
Query 1729 ATGAACCGTAATGTTCTAAGGCACGCTCCGTGTTCGATTGGTATTTTTGTGGACCGAAAC 1788
|||||||| || ||||||| ||| |||| |||||||||||||| |||||||| |||||
Sbjct 1732 ATGAACCGGAAGGTTCTAAAGCAAGCTCAATGTTCGATTGGTATCTTTGTGGATAGAAAC 1791
Query 1789 ATAACCGGATTTCAGCAGCCGCACGGGTTTGATTCTGTACAACACGTCGCAGCATTGTTC 1848
||||| || ||||| |||| ||||||| |||||| ||||||||||| || |||||||||
Sbjct 1792 ATAACAGGGTTTCACCAGCTTCACGGGTCTGATTCGGTACAACACGTTGCTGCATTGTTC 1851
Query 1849 TTTGGTGGTCCGGATGATCGTGAGGCTCT-TGCTCTGTGCAAGTGGCTCGCGAACAACAC 1907
|| |||||||| ||||||||||||||||| | || ||||||||||||| | || ||| |
Sbjct 1852 TTCGGTGGTCCTGATGATCGTGAGGCTCTGTCCT-TGTGCAAGTGGCTTACCAATAACTC 1910
Query 1908 TCTGATTCATCTCACAGTTATACAGTTCGTATCCGAGGAATCAAAGGCAGAGACTCCTGT 1967
|| |||||| ||||| || |||||||| || | || || |||||| |||||| |||
Sbjct 1911 TCAGATTCACCTCACTGTCATACAGTTTGTGGCGGATGACTCAAAGACAGAGAAAATTGT 1970
Query 1968 TGGAAATGCGATGACACGAG-ATAATAAAGAGGTTTTCATGGA-AGTTCTG-G-GAAGGA 2023
||| | ||| |||| | || | || || || || ||| |||| | || | | |||| |
Sbjct 1971 CGGAGACGCGGTGAC-CAAGGAAAACAACGAAGTATTCTTGGAGA-TTGTTAGTGAAG-A 2027
Query 2024 ATCAAACTGAACAA-GAAACAGATCGGAGCTTCTTAGAAGAATTCTATAACAGATTTGTA 2082
|||||| ||| || ||||||||||| | ||||||||||||||||||| ||||||||||
Sbjct 2028 -TCAAACCGAA-AACGAAACAGATCGAATCTTCTTAGAAGAATTCTATCACAGATTTGTG 2085
Query 2083 ACGACGGGACAAGTGGGGTTCATAGAGAAGCTTGTGAGCAATGGACCGCACACGCTGACG 2142
|||||||| ||||| || ||||||||||||| |||||||| ||| ||| ||||||||
Sbjct 2086 ACGACGGGGCAAGTTGGATTCATAGAGAAGCGAGTGAGCAACGGAATGCAGACGCTGACA 2145
Query 2143 ATTCTAAGAGAGATTGGAGAGATGTATTCACTGTTTGTGGTCGGAAAGAGCAGAGGAGAT 2202
|||||||||||||| || ||||||||||||||||||||||| ||||| | ||||||||||
Sbjct 2146 ATTCTAAGAGAGATCGGGGAGATGTATTCACTGTTTGTGGTAGGAAAAAACAGAGGAGAT 2205
Query 2203 TGCCCTATGACGGTGAG-AATGAAAGATTGGGAAGAGTGTCCGGAGCTCGGAACTGTCGG 2261
|| || ||||| | || |||||| |||||||||||||||||||| | ||||| |||||
Sbjct 2206 TGTCCAATGACT-TCAGGAATGAATGATTGGGAAGAGTGTCCGGAATTAGGAACGGTCGG 2264
Query 2262 TGATTTCTTGGCTTCGTCTT-TA-G-ATGTAAATGCGTCAGTATTAGTAGTTCAAAGACA 2318
|||||||||||||| || || | |||||||||| || ||||||||||||||||||||
Sbjct 2265 AGATTTCTTGGCTTCATCAAATATGGATGTAAATGCTTCTGTATTAGTAGTTCAAAGACA 2324
Query 2319 AAGACATTCACATGATAGCTTTATAGATGATTAG 2352
||| | ||| |||||||||| ||||||| |||
Sbjct 2325 TAGAAACTCATTTGATAGCTTTGTAGATGAATAG 2358
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 116766467670
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5