BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg909573 Length=1224 Score E Sequences producing significant alignments: (Bits) Value AT1G79420.1 | Symbols: | Protein of unknown function (DUF620) ... 1496 0.0 > AT1G79420.1 | Symbols: | Protein of unknown function (DUF620) | chr1:29871458-29874315 FORWARD LENGTH=1482 Length=1482 Score = 1496 bits (810), Expect = 0.0 Identities = 870/900 (97%), Gaps = 0/900 (0%) Strand=Plus/Plus Query 325 GAGACGTCGACAGCGCATTATATAATACAGCAATACTTAGCGGCAACGGGATGTCTAAAG 384 ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct 434 GAGACGTCGACAGCGCATTATATAATACAACAATACTTAGCGGCGACGGGATGTCTAAAG 493 Query 385 AGAGCGAAAGCGGCGAAGAACATGTACGCGACGGGGATAATGAAAATGAGTTGCTGTGAG 444 ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 494 CGAGCGAAGGCGGCGAAAAACATGTACGCGACGGGGATAATGAAAATGAGTTGCTGTGAG 553 Query 445 ACGGAGATCGCCGCCGGAAAAAGCGTGAAGACACTAGGCGGTGGTGGAAACGGTAGGAGC 504 |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 554 ACGGAGATAGCCGCCGGAAAAAGTGTGAAGACACTAGGCGGTGGTGGAAACGGTAGGAGC 613 Query 505 GGAGATAGTGGTTGCTTCGTGTTGTGGCAGATGCAGCCTGGAATGTGGTCTCTCGAACTT 564 ||||||||||||||||||||| ||||||||||||||||||||||||||||||| || ||| Sbjct 614 GGAGATAGTGGTTGCTTCGTGCTGTGGCAGATGCAGCCTGGAATGTGGTCTCTGGAGCTT 673 Query 565 GTTCTCGGTGGCACTAAACTCATCTCCGGCTCCGACGGTAAAACCGTTTGGCGCCATACG 624 ||||||||||| |||||||||||||| ||||| ||||||||||| ||||||||||||||| Sbjct 674 GTTCTCGGTGGAACTAAACTCATCTCTGGCTCGGACGGTAAAACAGTTTGGCGCCATACG 733 Query 625 CCATGGCTCGGTACTCACGCCGCTAAAGGCCCTCAACGTCCACTTCGCCGTCTAATCCAG 684 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 734 CCATGGCTCGGTACTCACGCCGCTAAAGGCCCTCAACGTCCACTTCGTCGTCTAATCCAG 793 Query 685 GGCTTGGACCCAAAAACCACAGCAAGCCTATTCGCAAAGGCCCAATGCTTAGGCGAACGA 744 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 794 GGCTTGGACCCAAAAACCACAGCAAGCCTATTCGCAAAGGCCCAATGCTTAGGCGAACGA 853 Query 745 AGAATCGGCGACGATGACTGTTTCGTGCTCAAAGTCTCCGCCGATCGTGACTCCTTGTTA 804 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 854 AGAATCGGCGACGATGACTGTTTCGTGCTCAAAGTCTCCGCCGATCGTGACTCGTTGTTA 913 Query 805 GAACGGAATGACGCCGGAGCTCCGGCGGAGGTTATACGCCACGCACTGTACGGATATTTC 864 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 914 GAACGGAATGACGCCGGAGCTCCGGCGGAGGTTATACGCCACGCACTGTACGGATACTTC 973 Query 865 TGTCAGAAAAGCGGTCTCTTAGTCTATTTAGAGGATTCACACCTCACTAGGGTTATGACG 924 ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct 974 TGTCAGAAAAGCGGTCTATTAGTCTATTTAGAGGATTCGCACCTCACTAGGGTTATGACG 1033 Query 925 ATCTCGCCTGAGGACGAGGCGGTTTACTGGGAGACGACAATCGGAACTAGCATCGGAGAT 984 |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| Sbjct 1034 ATCTCGCCTGAGGACGAGGCGGTTTACTGGGAGACGACGATCGGAACAAGCATCGGAGAT 1093 Query 985 TACCGTGATGTTGACGGAGTAGCCGTCGCGCATTGTGGTCGCGCCGTCGCGACGGTGTTT 1044 |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1094 TACCGTGACGTTGACGGAGTAGCCGTCGCGCATTGTGGTCGTGCCGTCGCGACGGTGTTC 1153 Query 1045 CGATTTGGGGAGACGTCGTTGCAGTATAGCAGAACGAGGATGGAGGAGATTTGGAGGATA 1104 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1154 CGATTTGGGGAGACGTCGTTGCAGTATAGCAGAACGAGGATGGAGGAGATTTGGAGGATA 1213 Query 1105 GACGACGTCGTTTTCGATGTGCCTGGCCTCTCTTTGGACTCCTTTATTCCTCCCGCCGAT 1164 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1214 GACGACGTCGTTTTCGATGTGCCTGGTCTCTCTTTGGACTCCTTTATTCCTCCCGCCGAT 1273 Query 1165 ATTTTTGAAGATACTAACCCTAATAATAATAATATTTACAGCAATGTCAATTCCCGATGA 1224 || |||||||||||||||||||| ||||||||||||||||| | ||| |||||||||||| Sbjct 1274 ATATTTGAAGATACTAACCCTAACAATAATAATATTTACAGTATTGTTAATTCCCGATGA 1333 Score = 551 bits (298), Expect = 6e-156 Identities = 317/326 (97%), Gaps = 1/326 (0%) Strand=Plus/Plus Query 1 ATGAGCAACTCAAAATCATACTGGAGAAAGCAAAGATGGGGAACGCCGCCGCAAGCCCTA 60 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 80 ATGAGCAACTCAAAGTCATACTGGAGAAAGCAAAGATGGGGAACGCCGCCACAAGCCCTA 139 Query 61 ACACCGTTAATGGAAGGGCCAGATCCAGACATGCAAGACGAAAGAACCAAGAAGGAGAGC 120 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 140 ACACCGTTAATGGAAGGACCAGATCCAGACATGCAAGACGAAAGAACCAAGAAGGAGAGC 199 Query 121 TCATGGGAAGCGATTAGAGAATGGTTTAAGGTTCATAAGGGCATTTCTGGAAATATGTCA 180 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 200 TCATGGGAAGCAATTAGAGAATGGTTTAAGGTTCATAAGGGCATTTCTGGAAATATGTCA 259 Query 181 TCTCCTTCGGTCCAACCACTTTGCAACAGCTATGACGTGCCGGCAAAGGGACAAGACTTG 240 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct 260 TCTCCTTCGGTCCAACCACTTTGCAACAGCTATGACGTGCCAGCTAAGGGACAAGACTTG 319 Query 241 AGGCTCTTGCTCGGCGTCTTGGGTTGTCCTCTTGCTCCAATCTCCGTTGTCGTCTATGAC 300 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 320 AGGCTCTTGCTCGGCGTCTTGGGTTGTCCTCTTGCTCCAATCTCCGTTGTCGTCTCTGAC 379 Query 301 -TATTTTCCGATGACCCTCTTCTTGG 325 ||||| ||||||||||||||||||| Sbjct 380 CTATTTCCCGATGACCCTCTTCTTGG 405 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 60140252910 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5