BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg909607
Length=1860
Score E
Sequences producing significant alignments: (Bits) Value
AT1G69730.1 | Symbols: | Wall-associated kinase family protein... 800 0.0
AT1G79680.1 | Symbols: WAKL10, ATWAKL10 | WALL ASSOCIATED KINAS... 682 0.0
AT1G16150.1 | Symbols: WAKL4 | wall associated kinase-like 4 | ... 394 2e-108
> AT1G69730.1 | Symbols: | Wall-associated kinase family protein
| chr1:26228632-26231339 REVERSE LENGTH=2450
Length=2450
Score = 800 bits (433), Expect = 0.0
Identities = 744/894 (83%), Gaps = 22/894 (2%)
Strand=Plus/Plus
Query 685 TTGTTATTCATATTTATTAGAAGGCGAAAGCGGA-TCAATCGC-AAA-AAGAATTTCTTC 741
||||||| || |||||||| || || |||| | | | || | | ||| ||||| ||||||
Sbjct 1174 TTGTTATACAAATTTATTAAAAAGC-AAAG-GAAGTTAAAC-CAAAAGAAGAAGTTCTTC 1230
Query 742 AAACGTAACGGAGGTCTATTGTTACAACAACAGTTAACTTCAACGGAAGGCACCGTCGAG 801
|| ||||| || ||||||||||| |||||||| || | |||||| | ||||| |||||
Sbjct 1231 AAGCGTAATGGTGGTCTATTGTTGCAACAACAATTGATTTCAACAGTAGGCATGGTCGAA 1290
Query 802 AAGACAAAAGTATTTAGTTCGAGGGAGTTGGAGAAAGCTACTGAAAACTTCAGTGAAAAC 861
||||||| ||| || |||||| | |||||||||||||||||||||||||||||| ||||
Sbjct 1291 AAGACAATAGTGTTCAGTTCGCGAGAGTTGGAGAAAGCTACTGAAAACTTCAGTTCAAAC 1350
Query 862 AGAGTTCTTGGACAAGGTGGTCAAGGCACTGTGTACAAGGGAATG-TTGGTCGATGGTAG 920
||| | ||||| || ||||||||||| || ||||||||||||||| || |||||||| ||
Sbjct 1351 AGAATACTTGGCCAGGGTGGTCAAGGTACAGTGTACAAGGGAATGCTT-GTCGATGGAAG 1409
Query 921 CATTGTGGCAGTCAAAAAA-TCTAAAATCGTGGACGAAGACAAGTTAGAAGAATTCATAA 979
|| || ||||| |||||| || ||| ||||||||||||||||| ||||||| ||||| |
Sbjct 1410 AATCGTTGCAGT-AAAAAAGTCCAAAGTCGTGGACGAAGACAAGCTAGAAGAGTTCATCA 1468
Query 980 ATGAGGTCGTCATTCTATCGCATATTAACCACAGGAACATCGTGAAACTCTTGGGATGTT 1039
||||||| |||||||| || || || ||||||||||||||||||||||||||||||||||
Sbjct 1469 ATGAGGTTGTCATTCTTTCACAGATCAACCACAGGAACATCGTGAAACTCTTGGGATGTT 1528
Query 1040 GCCTTGAGACGGAAGTCCCTCTTCTGGTCTACGAGTTTATTTCC-AATGGAAATCTTTTC 1098
|||||||||| |||||||| |||| ||||||||||||||| || ||||| || ||||||
Sbjct 1529 GCCTTGAGACAAAAGTCCCTGTTCTCGTCTACGAGTTTATT-CCTAATGGTAACCTTTTC 1587
Query 1099 GAGCATCTCCATGACGAATCATC-TGATTACACGATGGCCACTTGGGA-AGTGCGTCTGC 1156
|| ||||| ||||| || | | ||| ||| ||||| |||||| | | | ||||| |
Sbjct 1588 GAACATCTTCATGATGAGTT-TGATGAAAACATTATGGCTACTTGGAATA-TACGTCTCC 1645
Query 1157 GAATGGCTATAGAGATTGCCGGAGCTCTTTCATACCTACACTCAGCC-GCATCGGCTCCC 1215
| || |||||||| ||||| |||||||| |||||| | ||||| | | |||||| ||||
Sbjct 1646 GCATTGCTATAGATATTGCAGGAGCTCTCTCATACTTGCACTC-GTCTGCATCGTCTCCA 1704
Query 1216 ATTTATCACAGAGACATCAAATCTACAAACATAATGTTGGACGAGAAATATCGAGCTAAG 1275
|| |||||||||||| |||| |||||||||||||||||||| |||||||||||||| |||
Sbjct 1705 ATCTATCACAGAGACGTCAAGTCTACAAACATAATGTTGGATGAGAAATATCGAGCCAAG 1764
Query 1276 GTGTCCGATTTTGGTACTTCAAGAACGGTAACAGAGGATCATACCCATCT-GACAACACT 1334
||||| |||||||| || ||||||||||| |||| |||||||||||| || |||||| |
Sbjct 1765 GTGTCTGATTTTGGAACGTCAAGAACGGTGACAGTGGATCATACCCA-CTTGACAACGGT 1823
Query 1335 GGTTTCAGGTACTGCAGGATATTTGGATCCAGAATA-TTTCCAGTCAAGCCAATTCACTG 1393
||||||||||| | |||||| |||||||||| || |||| |||| ||||||||||| |
Sbjct 1824 AGTTTCAGGTACGGTGGGATATATGGATCCAGAGTACTTTC-AGTCTAGCCAATTCACAG 1882
Query 1394 ATAAGAGTGATGTGTATAGCTTCGGAGTTGTGTTGGTGGAACTCATCACAGGAGAAAAAC 1453
| || |||||||| ||||||||||| || ||| | ||||| || || || ||||||||
Sbjct 1883 ACAAAAGTGATGTCTATAGCTTCGGGGTCGTGCTAGTGGAGCTAATAACTGGAGAAAAGT 1942
Query 1454 CGATTTCTTTCACGCGACCTCAAGAAAACAGAACATTGGCAACTTATTTCACTATTTCAG 1513
||||||||||| | | ||||||||||||| ||||||||||||||||||| | || ||
Sbjct 1943 CGATTTCTTTCTTGAGGTCTCAAGAAAACAGGACATTGGCAACTTATTTCATTCTTGCAA 2002
Query 1514 TGAAGGAAAACAGAGTCGTGGATATCATCGATGCTCGAATCAGAGATGATTGCA 1567
|||| ||||||| | || | ||||| |||||||||||||| ||||||| |||||
Sbjct 2003 TGAAAGAAAACAAACTCTTCGATATTATCGATGCTCGAATAAGAGATGGTTGCA 2056
Score = 84.2 bits (45), Expect = 4e-15
Identities = 59/65 (91%), Gaps = 3/65 (5%)
Strand=Plus/Plus
Query 1773 TGCTGCATCATCTTCATCGTGGTCAGATGTTGAACCATTGTTTCCTTCT-CAGACACG-T 1830
|||||| |||||||| |||||||||||||||||||||||||||||| || || ||||| |
Sbjct 2319 TGCTGCCTCATCTTCTTCGTGGTCAGATGTTGAACCATTGTTTCCT-CTTCAAACACGGT 2377
Query 1831 AAAAC 1835
|||||
Sbjct 2378 AAAAC 2382
> AT1G79680.1 | Symbols: WAKL10, ATWAKL10 | WALL ASSOCIATED KINASE
(WAK)-LIKE 10 | chr1:29979973-29982773 REVERSE LENGTH=2549
Length=2549
Score = 682 bits (369), Expect = 0.0
Identities = 733/908 (81%), Gaps = 28/908 (3%)
Strand=Plus/Plus
Query 687 GTTATTCATATTTATTAGAAGGCGAAA-GCGGATCAATCGC-AAA-AAGAATTTCTTCAA 743
||||| || |||||||||||| | ||| | || | || | | ||| ||||| ||||| ||
Sbjct 1158 GTTATACAAATTTATTAGAAGAC-AAAGGAGG-TTAAAC-CAAAAGAAGAAATTCTTTAA 1214
Query 744 ACGTAACGGAGGTCTATTGTTACAACAACAGTTAACTTCAACGGAAGGCACCGTCGAGA- 802
||||| || ||| ||||||| |||||||| || ||| |||| ||||||| ||| | ||
Sbjct 1215 GCGTAATGGGGGTTTATTGTTGCAACAACAATTGACTACAACTGAAGGCAACGT-G-GAC 1272
Query 803 AG-ACAAAAGTATTTAGTTCGAGGGAGTTGGAGAAAGCTACTGAAAACTTCAG-TGAAAA 860
|| |||| ||| || | || || |||||||||||||| || |||||||| || | ||
Sbjct 1273 AGTACAAGAGTGTTCAACTCAAGAGAGTTGGAGAAAGCCACCGAAAACTTTAGCT-TAAC 1331
Query 861 CAGAGTTCTTGGAC-AAGGTGGTCAAGGCACTGTGTACAAGGGAATG-TTGGTCGATGGT 918
|||| | || || | |||| |||||||| || ||||||||||||||| || || || |||
Sbjct 1332 CAGAATACTAGG-CGAAGGAGGTCAAGGTACAGTGTACAAGGGAATGCTT-GTAGACGGT 1389
Query 919 AGCATTGTGGCAGTCAAA-AAATCTAAAATCGTGGACGAAGACAAGTTAGAAGAATTCAT 977
|| || || ||||| ||| || || ||| |||| |||||||||||| ||||||| |||||
Sbjct 1390 AGAATAGTAGCAGT-AAAGAAGTCCAAAGTCGTAGACGAAGACAAGCTAGAAGAGTTCAT 1448
Query 978 AAATGAGGTCGTCATTCTATCGCATATTAACCACAGGAACATCGTGAAACTCTTGGGATG 1037
|| || ||||||||||| || || || ||||| ||||||||||| ||||||||||| ||
Sbjct 1449 CAACGAAGTCGTCATTCTCTCACAAATCAACCATAGGAACATCGTAAAACTCTTGGGGTG 1508
Query 1038 TTGCCTTGAGACGGAAGTCCCTCTTCTGGTCTACGAGTTTATTTCC-AATGGAAATCTTT 1096
|||||| ||||| || |||||| |||| |||||||| || | |||| ||||| || ||||
Sbjct 1509 TTGCCTAGAGACAGATGTCCCTATTCTAGTCTACGAATTCA-TTCCTAATGGTAACCTTT 1567
Query 1097 TCGAGCATCTCCATGACGAATCATCTGATTACACGATGGCCACTTGGGAAGTGCGTCTGC 1156
| |||||||| ||||| || || |||||| |||||| | ||||||||||||||||| |
Sbjct 1568 TTGAGCATCTTCATGATGATTCCGATGATTATACGATGACTACTTGGGAAGTGCGTCTTC 1627
Query 1157 GAATGGCTATAGAGATTGCCGGAGCTCTTTCATACCTACACTCAGCCGCATCGGCTCCCA 1216
| || ||| |||| ||||| ||||| |||||||| | ||||| || ||||| |||| |
Sbjct 1628 GTATTGCTGTAGATATTGCAGGAGCGCTTTCATATTTGCACTCGGCTGCATCATCTCCAA 1687
Query 1217 TTTATCACAGAGACATCAAATCTACAAACATAATGTTGGACGAGAAATATCGAGCTAAGG 1276
| ||||||||||||||||| ||||||||||||||||| || |||||| ||||||| || |
Sbjct 1688 TCTATCACAGAGACATCAAGTCTACAAACATAATGTTAGATGAGAAACATCGAGCCAAAG 1747
Query 1277 TGTCCGATTTTGGTACTTCAAGAACGGTAACAGAGGATCATACCCATCTGACAACACTGG 1336
|||||||||||||||||||||||||||| || | |||||||||||| || || ||| | |
Sbjct 1748 TGTCCGATTTTGGTACTTCAAGAACGGTGACCGTGGATCATACCCACCTCACTACAGTAG 1807
Query 1337 TTTCAGGTACTGCAGGATATTTGGATCCAGAATATTTCCAGTCAAGCCAATTCACTGATA 1396
||||||| || | |||||| |||||||||| ||||||||||| ||||||||||| || |
Sbjct 1808 TTTCAGGCACGGTGGGATATATGGATCCAGAGTATTTCCAGTCGAGCCAATTCACAGACA 1867
Query 1397 AGAGTGATGTGTATAGCTTCGGAGTTGTGTTGGTGGAACTCATCACAGGAGAAAAACCGA 1456
| |||||||| |||||||| ||||| ||| | | ||| || ||||| ||||||||| | |
Sbjct 1868 AAAGTGATGTTTATAGCTTTGGAGTCGTGCTAGCGGAGCTAATCACTGGAGAAAAATC-A 1926
Query 1457 TT-TCTTT-CACGCGACCTCAAGAAAACAGAACATTGGCAACTTATTTCACTATTTCAGT 1514
| ||||| | |||| |||| ||| | || ||||||||||||||||||||| || || |
Sbjct 1927 GTCTCTTTTCT-GCGATCTCAGGAATATAGGACATTGGCAACTTATTTCACTCTTGCAAT 1985
Query 1515 GAAGGAAAACAGAGTCGTG-GATATCATCGATGCTCGAATCAGAGATGATTGCAAGCTGG 1573
||| || |||||| || | || || || ||||||||||| ||||||| ||| ||| ||
Sbjct 1986 GAAAGAGAACAGACTC-TCCGACATTATTGATGCTCGAATAAGAGATGGTTGTAAGTTG- 2043
Query 1574 AA-CAAGT 1580
|| |||||
Sbjct 2044 AATCAAGT 2051
> AT1G16150.1 | Symbols: WAKL4 | wall associated kinase-like 4
| chr1:5532415-5534877 FORWARD LENGTH=2340
Length=2340
Score = 394 bits (213), Expect = 2e-108
Identities = 565/733 (77%), Gaps = 32/733 (4%)
Strand=Plus/Plus
Query 736 TTCTTCAAACGTAACGGAGGTCTATTGTTACAACAACAGTTAACTTCAACGGAAGGCACC 795
||||||| ||||| ||||| | ||||| ||||||||||| || || |||||||
Sbjct 1210 TTCTTCAGGCGTAATGGAGGGATGCTGTTAAAACAACAGTTAGCTAGAAAAGAAGGCAAT 1269
Query 796 GTCGAGAAGACAAAAG-TATTTAGTTCGAGGGAGTTGGAGAAAGCTACTGAAAACTTCAG 854
|| |||| | | |||| ||||||| |||| |||||||||||||||||||| ||||| |
Sbjct 1270 GTAGAGATGTC-AAAGATATTTAGCTCGAACGAGTTGGAGAAAGCTACTGATAACTTTA- 1327
Query 855 TGA-AAACAGAGTTCTTGGACAAGGTGGTCAAGGCACTGTGTACAAGGGAATGTTGGTCG 913
| || || |||||||| ||||| |||||||| ||||| ||||| || ||| | || |
Sbjct 1328 ACACGAATAGGGTTCTTGGGCAAGGAGGTCAAGGTACTGTTTACAAAGGTATGCTCGTTG 1387
Query 914 ATGGTAGCATTGTGGCAGTCAAAAAATCTAAAATCGTGGACGAAGACAAGTTAGAAGAAT 973
||||||| || || ||||| |||| || ||| | |||| ||||||||| ||||||| |
Sbjct 1388 ATGGTAGAATCGTCGCAGTGAAAAGGTCGAAAGCCATGGATGAAGACAAGGTAGAAGAGT 1447
Query 974 TCATAAATGAGGTCGTCATTCTATCGCATATTAACCACAGGAACATCGTGAAACTCTTGG 1033
| || ||||| || || ||||| |||| || ||||| || ||||| || ||||||||||
Sbjct 1448 TTATCAATGAAGTTGTTGTTCTAGCGCAGATCAACCATAGAAACATTGTTAAACTCTTGG 1507
Query 1034 GATGTTGCCTTGAGACGGAAGTCCCTCTTCTGGTCTACGAGTTTATTTCC-AATGGAAAT 1092
|||||||||||||||||||||| || | ||||| || |||||| || || || || |
Sbjct 1508 GATGTTGCCTTGAGACGGAAGTTCCAGTCCTGGTTTATGAGTTTGTT-CCGAACGGTGA- 1565
Query 1093 CTTTT-CGAGCATCTCC-ATGACGAATCATC-TGATTACA-CGATGGCCACTTGGGAAGT 1148
||| | | ||| ||| | | || |||| | |||||||| | ||| | | | |||||||
Sbjct 1566 CTTATGCAAGCGTCTTCGA-GATGAATG-TGATGATTACATC-ATGAC-A-T-GGGAAGT 1619
Query 1149 GCGTCTGCGA-ATGGCTATAGAGATTGCCGGAGCTCTTTCATACCTACACTCAGCCGCAT 1207
||| || | | || || ||||||||||| ||||| ||||| ||||||||||| || ||||
Sbjct 1620 GCGCCTTC-ACATTGCAATAGAGATTGCAGGAGCACTTTCGTACCTACACTCGGCTGCAT 1678
Query 1208 CGGCTCCCATTTATCACAGAGACATCAA-ATCTACAAACATAATGTTGGACGAGAAATAT 1266
| ||| || || |||||||| ||||| | |||| |||||| | |||| |||||||||
Sbjct 1679 CTTTTCCTATATACCACAGAGATATCAAGA-CTACCAACATACTACTGGATGAGAAATAT 1737
Query 1267 CGAGCT-AAGGTGTCCGATTTTGGTACTTCAAGAACGGTAAC-AGAGGATCATACCCATC 1324
| || | |||||||| ||||| || ||||||||| |||| || | || |||| || || |
Sbjct 1738 C-AGGTTAAGGTGTCTGATTTCGGAACTTCAAGATCGGTGACCATAG-ATCAAACTCA-C 1794
Query 1325 T-GACAACACTGGTTTCAGGTACTGCAGGATATTTGGATCCAGAATA-TTTCCAGTCAAG 1382
| |||||| | ||| |||||||| || || |||||||||| || |||| | |||||
Sbjct 1795 TTGACAACTCAAGTTGCAGGTACTTTTGGGTACGTGGATCCAGAGTACTTTCAA-TCAAG 1853
Query 1383 CCAA-TTCACTGATAAGAGTGATGTGTATAGCTTCGGAGTTGTGTTGGTGGAACTCATCA 1441
|| || || ||||| ||||||||||| || || |||||||| | ||||| ||||| |
Sbjct 1854 T-AAGTTTACGGATAAAAGTGATGTGTACAGTTTTGGAGTTGTCCTCGTGGAGCTCATTA 1912
Query 1442 CAGGAGAAAAACC 1454
| ||| |||||||
Sbjct 1913 CCGGA-AAAAACC 1924
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 92067799530
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5