BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg909665 Length=435 Score E Sequences producing significant alignments: (Bits) Value AT1G80500.1 | Symbols: | SNARE-like superfamily protein | chr1... 538 2e-152 > AT1G80500.1 | Symbols: | SNARE-like superfamily protein | chr1:30270529-30272668 FORWARD LENGTH=898 Length=898 Score = 538 bits (291), Expect = 2e-152 Identities = 315/327 (96%), Gaps = 0/327 (0%) Strand=Plus/Plus Query 109 AGAGAAGATGCTGCCCAGTTGCACCAATTTATATTACATGCCGCATTAGATGTTGTCCAA 168 |||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||| Sbjct 335 AGAGAAGATGCTGCACAGTTGCACCAATTTATATTACATGCAGCGTTAGATGTTGTCCAA 394 Query 169 GACCTAGCATGGACTACAAGTGCCATGTTCTTGAAGTCAGTAGACAGGTTTAACGATCTG 228 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 395 GACCTAGCATGGACTACAAGTGCCATGTTCTTGAAGTCAGTGGACAGGTTTAACGATCTG 454 Query 229 GTTGTGTCAGTGTATGTTACCGCAGGCCATACTCGACTCATGCTCCTTCATGATTCACGG 288 ||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct 455 GTTGTGTCAGTATATGTTACCGCAGGCCATACCCGACTGATGCTCCTTCATGATTCACGG 514 Query 289 AATGAGGACGGCATCAAGAGCTTCTTTCAAGAGGTGCATGAGCTCTATATAAAGATTCTT 348 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 515 AATGAGGACGGCATCAAGAGCTTCTTTCAAGAGGTGCATGAGCTTTATATAAAGATTCTT 574 Query 349 CTGAATCCCTTGTATCTTCCTGGTTCTCGGATTACGTCGTCACATTTTGACACTAAAGTA 408 |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct 575 CTGAATCCCTTGTATCTTCCTGGTTCTCGGATAACGTCGTCACATTTTGACACCAAAGTA 634 Query 409 CGTGCACTGGCAAGAAAGTATCTGTAG 435 |||||||| ||||||||||| |||||| Sbjct 635 CGTGCACTTGCAAGAAAGTACCTGTAG 661 Score = 128 bits (69), Expect = 4e-29 Identities = 77/81 (95%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 1 ATGGCTAACACCGCCTGCTTTATAATTGTGGGTCGGAATGATATTCCCATCTATGAAGCT 60 ||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct 254 ATGGCTAACACTGCCTGCTTTATCATTGTGGGCCGGAATGATATTCCCATCTATGAAGCT 313 Query 61 GAAGTTGGATCTGCTGCCAAA 81 ||||||||||||||||| ||| Sbjct 314 GAAGTTGGATCTGCTGCTAAA 334 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 20660044839 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5