BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg909682 Length=963 Score E Sequences producing significant alignments: (Bits) Value AT1G80320.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-depen... 1544 0.0 AT1G80325.1 | Symbols: | other RNA | chr1:30196605-30197933 RE... 830 0.0 > AT1G80320.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr1:30196782-30197896 FORWARD LENGTH=963 Length=963 Score = 1544 bits (836), Expect = 0.0 Identities = 922/964 (96%), Gaps = 4/964 (0%) Strand=Plus/Plus Query 1 ATGGACTCACATGAAGAGCAATGCTTACCTATCCTCGACTTCTCCCGCGATAAACTAGTG 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1 ATGGACTCACATGAAGAGCAATGCTTACCTATCCTCGACTTCTCCAGCGATAAACTAGTG 60 Query 61 CGAGGCACGAGTCACTGGATCACGACCAGGGAAAATGTAAGAAGAGCCATGGAGGAGCAG 120 |||||||||||||||||||||||||||||||| |||| |||||||||||||||| |||| Sbjct 61 CGAGGCACGAGTCACTGGATCACGACCAGGGACGATGTCAGAAGAGCCATGGAGGGGCAG 120 Query 121 GGTTGGTTTGTGGCAGAGTTCAATGGCGTCTCATGTGACCTCAGGGACAAGTTGCTGGCC 180 |||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||| Sbjct 121 GGTTGGTTTGTGGCAGAGTTCAGTGGCGTCTCATCTGACCTCAGGGACAACTTGCTGGCC 180 Query 181 GGCATGAAGGAGATGTATGATCTCCCAGACCAAATCAAAATCAAGAACGAGAACCACAAG 240 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 181 GGCATGAAGGAGATGTATTATCTCCCAGACCAAATCAAAATCAAGAACGAGAACCACAAG 240 Query 241 GCCTCCCATGGCTACATGTCTATGGTTGTTGACGATTACCGGATCCATGAGAGCTTGGGG 300 || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 241 GCGTCCCATGGCTACATGTCTATGGTAGTTGACGATTACCGGATCCATGAGAGCTTGGGG 300 Query 301 ATCGACTATGCAACCGAGCTCCAAGCTTGCAAAGATTTCTCTAAACTACTCTGGCCACAA 360 ||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct 301 ATCGATTATGCAACCGAGCTTCAAGCTTGCAAAGACTTCTCTAAACTACTCTGGCCACAG 360 Query 361 GGAAACGATCCCTTCTGTCAAACCACGCATATGTATGCAACGGCAATGGCAGAACTAGAC 420 |||||||||||||||||||||||||| ||||||||||||| | ||||||| || |||||| Sbjct 361 GGAAACGATCCCTTCTGTCAAACCACACATATGTATGCAATGACAATGGCGGAGCTAGAC 420 Query 421 CAGGCGGTGATGAGGATGCTGTTTGAGAGCTATGGAATGGATGAGAAGAAGCATTCTGCG 480 ||| |||||||||||||| ||| ||| ||||||||||||||||||||||||||||||| | Sbjct 421 CAGACGGTGATGAGGATGTTGTATGAAAGCTATGGAATGGATGAGAAGAAGCATTCTGTG 480 Query 481 AGTCATTCCGAGTCAACTCGATACCTGTTGAGGATGCTGAGTTACCGGAGACAGGAAAAC 540 ||||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct 481 AGTCACTCCGAGTCAACTCGATACCTGTTGAGGATGCTGAGTTACAGGAGACAGCAAAAC 540 Query 541 GGTGAAGCAAACACTGGCTTT-GTATCACACACTGATAAGAGCTTCATGAGTATCCTCCA 599 ||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||| Sbjct 541 GGTGAAGCAAACACTGG-TTTCGTGTCACACACTGATAAGAGCTTCATGAGTATCCTCCA 599 Query 600 CCAGAACCACGTCGGAGGTCTCCAGCTGAAAACCATGACCGGTCAATGGGTCGGGTTTAA 659 ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| Sbjct 600 CCAGAACCACGTCGGAGGTCTCCAGTTGAAAACCATGACCGGCCAATGGGTCGGGTTTAA 659 Query 660 CCCGTCCCCAACAAGATTCGTCGTTCTCTCCGGCATGGGTCTCACGGCGTGGAGTAACGA 719 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 660 CCCGTCCCCAACAAGATTCGTCGTTCTCTCCGGCATGGGTCTCACGGCGTGGAGTAACGA 719 Query 720 TAGGATAAAGGCATGTTACCACAAGGTAGTGATGAGCGCAGATGAGATTCGATACTCTTT 779 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 720 TAGGATAAAGGCATGTTACCACAAGGTAGTGATGAGTGCAGATGAGATTCGATACTCTTT 779 Query 780 TGGGTTTTTCTCCTTCCACAAAGGAACCATTCGTACGCCGGAGGAGCTCGTCGATGACCA 839 |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct 780 AGGGTTTTTCTCCTTCCACAAAGGAACGATCCGTACGCCGGAGGAGCTCGTCGATGACCA 839 Query 840 ACATCCCCTCCGCTACAGTCCTTTCGAGCACGACGGCCTCTTACGCTTCTACGAGTCGTA 899 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 840 ACATCCCCTCCGCTACAATCCTTTCGAGCACGACGGCCTCTTACGCTTCTACGAGTCGTA 899 Query 900 CCTCAATTCTCTCAAGAAATCCAGCGAGGATCTTCTCCAGATCTACTGCGGCGTCA-ATC 958 | ||||||||||||||||||||||||| |||||||||||||||||||||||||||| | | Sbjct 900 CATCAATTCTCTCAAGAAATCCAGCGAAGATCTTCTCCAGATCTACTGCGGCGTCACA-C 958 Query 959 CCTA 962 |||| Sbjct 959 CCTA 962 > AT1G80325.1 | Symbols: | other RNA | chr1:30196605-30197933 REVERSE LENGTH=1252 Length=1252 Score = 830 bits (449), Expect = 0.0 Identities = 546/592 (92%), Gaps = 10/592 (2%) Strand=Plus/Minus Query 377 GTCAAACCACGCATATGTATGCAACGGCAATGGCAGAACTAGACCAGGCGGTGATGAGGA 436 |||||||||| ||||||||||||| | ||||||| || ||||||||| |||||||||||| Sbjct 626 GTCAAACCACACATATGTATGCAATGACAATGGCGGAGCTAGACCAGACGGTGATGAGGA 567 Query 437 TGCTGTTTGAGAGCTATGGAATGGATGAGAAGAAGCATTCTGCGAGTCATTCCGAGTCAA 496 || ||| ||| ||||||||||||||||||||||||||||||| |||||| |||||||||| Sbjct 566 TGTTGTATGAAAGCTATGGAATGGATGAGAAGAAGCATTCTGTGAGTCACTCCGAGTCAA 507 Query 497 CTCGATACCTGTTGAGGATGCTGAGTTACCGGAGACAGGAAAACGGTGAAGCAAACACTG 556 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct 506 CTCGATACCTGTTGAGGATGCTGAGTTACAGGAGACAGCAAAACGGTGAAGCAAACACTG 447 Query 557 GCTTT-GTATCACACACTGATAAGAGCTTCATGAGTATCCTCCACCAGAACCACGTCGGA 615 | ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 446 G-TTTCGTGTCACACACTGATAAGAGCTTCATGAGTATCCTCCACCAGAACCACGTCGGA 388 Query 616 GGTCTCCAGCTGAAAACCATGACCGGTCAATGGGTCGGGTTTAACCCGTCCCCAACAAGA 675 ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 387 GGTCTCCAGTTGAAAACCATGACCGGCCAATGGGTCGGGTTTAACCCGTCCCCAACAAGA 328 Query 676 TTCGTCGTTCTCTCCGGCATGGGTCTCACGGCGTGGAGTAA-CGATAG--GATAAAGGC- 731 ||||||||||||||||||||||||||||||| | | ||| | | | ||| | | | Sbjct 327 TTCGTCGTTCTCTCCGGCATGGGTCTCACGGTGAGCTCTAAACCAAATCCGATTA-GTCG 269 Query 732 ATGTTACCACAAGGTAGTGATGAGCGCAGATGAGATTCGATACTCTTTTGGGTTTTTCTC 791 | ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct 268 AAAC-ACCACAAGGTAGTGATGAGTGCAGATGAGATTCGATACTCTTTAGGGTTTTTCTC 210 Query 792 CTTCCACAAAGGAACCATTCGTACGCCGGAGGAGCTCGTCGATGACCAACATCCCCTCCG 851 ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct 209 CTTCCACAAAGGAACGATCCGTACGCCGGAGGAGCTCGTCGATGACCAACATCCCCTCCG 150 Query 852 CTACAGTCCTTTCGAGCACGACGGCCTCTTACGCTTCTACGAGTCGTACCTCAATTCTCT 911 ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 149 CTACAATCCTTTCGAGCACGACGGCCTCTTACGCTTCTACGAGTCGTACATCAATTCTCT 90 Query 912 CAAGAAATCCAGCGAGGATCTTCTCCAGATCTACTGCGGCGTCA-ATCCCTA 962 ||||||||||||||| |||||||||||||||||||||||||||| | ||||| Sbjct 89 CAAGAAATCCAGCGAAGATCTTCTCCAGATCTACTGCGGCGTCACA-CCCTA 39 Score = 614 bits (332), Expect = 6e-175 Identities = 369/387 (95%), Gaps = 1/387 (0%) Strand=Plus/Minus Query 1 ATGGACTCACATGAAGAGCAATGCTTACCTATCCTCGACTTCTCCCGCGATAAACTAGTG 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1075 ATGGACTCACATGAAGAGCAATGCTTACCTATCCTCGACTTCTCCAGCGATAAACTAGTG 1016 Query 61 CGAGGCACGAGTCACTGGATCACGACCAGGGAAAATGTAAGAAGAGCCATGGAGGAGCAG 120 |||||||||||||||||||||||||||||||| |||| |||||||||||||||| |||| Sbjct 1015 CGAGGCACGAGTCACTGGATCACGACCAGGGACGATGTCAGAAGAGCCATGGAGGGGCAG 956 Query 121 GGTTGGTTTGTGGCAGAGTTCAATGGCGTCTCATGTGACCTCAGGGACAAGTTGCTGGCC 180 |||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||| Sbjct 955 GGTTGGTTTGTGGCAGAGTTCAGTGGCGTCTCATCTGACCTCAGGGACAACTTGCTGGCC 896 Query 181 GGCATGAAGGAGATGTATGATCTCCCAGACCAAATCAAAATCAAGAACGAGAACCACAAG 240 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 895 GGCATGAAGGAGATGTATTATCTCCCAGACCAAATCAAAATCAAGAACGAGAACCACAAG 836 Query 241 GCCTCCCATGGCTACATGTCTATGGTTGTTGACGATTACCGGATCCATGAGAGCTTGGGG 300 || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 835 GCGTCCCATGGCTACATGTCTATGGTAGTTGACGATTACCGGATCCATGAGAGCTTGGGG 776 Query 301 ATCGACTATGCAACCGAGCTCCAAGCTTGCAAAGATTTCTCTAAACTACTCTGGCCACAA 360 ||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct 775 ATCGATTATGCAACCGAGCTTCAAGCTTGCAAAGACTTCTCTAAACTACTCTGGCCACAG 716 Query 361 GGAAACGATCCCTTCTG-TCAAACCAC 386 ||||||||||||||||| | ||| ||| Sbjct 715 GGAAACGATCCCTTCTGGTAAAAACAC 689 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 47119629886 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5