BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg909816 Length=1533 Score E Sequences producing significant alignments: (Bits) Value AT1G01570.1 | Symbols: | Protein of unknown function (DUF604) ... 2218 0.0 > AT1G01570.1 | Symbols: | Protein of unknown function (DUF604) | chr1:205176-207435 FORWARD LENGTH=1437 Length=1437 Score = 2218 bits (1201), Expect = 0.0 Identities = 1368/1447 (95%), Gaps = 17/1447 (1%) Strand=Plus/Plus Query 94 ATGTCGAAGCTAATCTTCTTAATTCTCGCCATTCTTTTCTCTCTTCAATTCGTTTTCTAC 153 ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1 ATGTCGAGGCTAATCTTCTTAATTCTCGCCATTCTCTTCTCTCTTCAATTCGTTTTCTAC 60 Query 154 CCTTTAAATTTCATCTCCTCTTCTTCTGAACCTCGATCTCTGATCAAATTCTCTGTTTCA 213 ||||||||||||||||||||||||||| || | ||||||||||||||||||||||| Sbjct 61 CCTTTAAATTTCATCTCCTCTTCTTCTCAA---C---CTCTGATCAAATTCTCTGTTTCA 114 Query 214 CCCGTCGGATCCGGATCCGGGTCGGTTCATGAACCGGAACAAACCGAACTCAAGCACGTC 273 ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 115 CCCGTCGTATCCGGATCCGGGTCGGTTCATGAACCGGACCAAACCGAACTCAAGCACGTC 174 Query 274 GTTTTCGGAATCGCCGCCTCTGCGAAATTCTGGAAACACCG-AAGAGACTACGTGAAGCT 332 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct 175 GTTTTCGGAATCGCCGCCTCTGCGAAATTCTGGAAACACCGTAA-AGACTACGTGAAGCT 233 Query 333 CTGGTGGAAACCAAACGGTGAAATGAACGGCGTCGTTTGGTTGGACCAACACATTGACCA 392 |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct 234 CTGGTGGAAACCAAACGGTGAAATGAACGGCGTCGTTTGGTTAGACCAACACATTAACCA 293 Query 393 AAACGACAACGTTTCGAACACATTACCTCCGCTCAGAATCTCCTCCGACACGTCGAGGTT 452 |||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||||| Sbjct 294 AAACGACAACGTTTCGAAAACATTACCTCCGATCAGAATCTCCTCCGACACGTCTAGGTT 353 Query 453 TAAGTATC-GATACCCGAAGGGACTCCGATCGGCGATAAGAATCACGAGAATCGTCTCGG 511 | |||| | ||||||| ||||| |||||||||||||| |||||||||||||||||||||| Sbjct 354 TCAGTA-CAGATACCCAAAGGGTCTCCGATCGGCGATCAGAATCACGAGAATCGTCTCGG 412 Query 512 AGACAGTGAGGCTCTTGAACGGAACAGAGTCT-GAGAAAAACGTGAGGTGGATTGTGATG 570 |||| |||||||| |||||||||||||||| | ||||||||||||||||||||||||||| Sbjct 413 AGACGGTGAGGCTGTTGAACGGAACAGAGT-TGGAGAAAAACGTGAGGTGGATTGTGATG 471 Query 571 GGAGACGACGACACTGTGTTTTTCCCGGAGAATCTTGTTAAGGTTTTGAGAAAGTACGAT 630 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 472 GGAGACGACGACACTGTGTTTTTCCCGGAGAATCTTGTCAAGGTTTTGAGAAAGTACGAT 531 Query 631 CATAATCAGTTTTATTACATCGGAAGCTCGTCGGAGAGTCATATTCAGAATCTGAAGTTC 690 || ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct 532 CACAATCAGTTTTATTACATCGGAAGCTCGTCGGAGAGTCATATACAGAATCTCAAGTTC 591 Query 691 TCTTACGGGATGGCTTATGGAGGAGGAGGGTTCGCGATTAGCTATCCGTTGGCTAAAGCA 750 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 592 TCTTACGGGATGGCTTATGGAGGAGGAGGGTTCGCGATTAGCTATCCGTTGGCTAAAGCA 651 Query 751 TTGGAGAAAATGCAAGATCGTTGTATTCAGAGATATGCGGAATTGTACGGCTCCGATGAT 810 || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 652 TTAGAGAAAATGCAAGATCGTTGTATTCAGAGATATTCGGAATTGTACGGCTCCGATGAT 711 Query 811 CGGATTCATGCTTGTATGTCGGAACTCGGTGTTCCTTTGACTAAAGAAGTTGGCTTCCAT 870 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 712 CGGATTCATGCTTGTATGTCGGAACTCGGTGTTCCTTTGACTAAGGAAGTTGGCTTCCAT 771 Query 871 CAGATTGATTTATATGGGAAACTTCTAGGCCTGCTATCGGCCCATCCATTGGCTCCGCTA 930 |||||||||||||| ||||||||||| ||||| |||||||||||||| ||||||| ||| Sbjct 772 CAGATTGATTTATACGGGAAACTTCTGGGCCTATTATCGGCCCATCCACTGGCTCCTCTA 831 Query 931 GTCTCGATCCATCATTTAGACTTAGTGGATCCAGTATTCCCAAATATGGGCCGAGTCAAC 990 || |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 832 GTATCGATCCACCATTTAGACTTAGTGGATCCAGTATTCCCAAACATGGGCCGAGTCAAC 891 Query 991 GCCATGAGACGTTTCATGGTCTCCGCAAAGCTGGACTCAGCGAGCCTCGCGCAGCAGTCA 1050 ||||||||||||||||||||| ||||||| || |||||| |||||||||||||||| ||| Sbjct 892 GCCATGAGACGTTTCATGGTCCCCGCAAAACTCGACTCACCGAGCCTCGCGCAGCAATCA 951 Query 1051 ATCTGCTACGACGTGGACCACCGATGGACCGTGTCTGTCTCGTGGGGTTACACAGTTCAG 1110 ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||| Sbjct 952 ATCTGCTACGACGCGGACCACCGATGGACCGTGTCTGTCTCGTGGGGATACACAGTCCAG 1011 Query 1111 ATCACACGTGGCGTGTTGTCAGCTAAAGAGATGGTGATCCCCACGCGCACGTTCATCGAC 1170 |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1012 ATCATACGTGGCGTGTTGTCAGCTAGAGAGATGGTGATCCCCACGCGCACGTTCATCGAT 1071 Query 1171 TGGTACAAACAAGCTGACGAGAGAAGCTACGCTTTTAACACGCGTCC-AGTCGCCAAGAG 1229 ||||||||||| || ||||| |||||||| ||||||||||||||||| | ||||||| || Sbjct 1072 TGGTACAAACAGGCAGACGAAAGAAGCTATGCTTTTAACACGCGTCCTA-TCGCCAAAAG 1130 Query 1230 CGCGTGTCAGCGTCCGCGAGTGTATTACCTATCCAACGCGCTTCCTGACTTGGCATTGCA 1289 |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| Sbjct 1131 CGCGTGTCAGCGTCCGCGAGTGTATTACCTGTCCAACGCGCTTCCTGACTTGGCTTTGCG 1190 Query 1290 TAGAACTGCTAGTGAGTACGT--GA-GGTATGACATGTGGGAGCCTGAATGTGACTGGGA 1346 ||||||||||||||| ||||| || |||| ||||||||||||||||||||||||||||| Sbjct 1191 TAGAACTGCTAGTGAATACGTGAGATGGTACGACATGTGGGAGCCTGAATGTGACTGGGA 1250 Query 1347 TATGTCGGATCCTTCGGAAATTGAACGGGTCATTGTTTATAAGAAACCCGACCCGGATAG 1406 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1251 TATGTCGGATCCTTCGGAATTTGAACGGGTCATTGTTTATAAGAAACCCGACCCGGATAG 1310 Query 1407 ATGGAATAAACATAGGGCTCCGAGAAGAGATTGTTGTAGAGTATTGCCTATGAAGAAGAA 1466 |||||||||||||||||||||||||||||||||||||||||||||||| | || |||||| Sbjct 1311 ATGGAATAAACATAGGGCTCCGAGAAGAGATTGTTGTAGAGTATTGCCCACGACGAAGAA 1370 Query 1467 TGGGACGATGGTAATCGATGTAGGAACTTGTAAAGATGATGAATTTGTTGAATTCCCTGT 1526 |||||| |||||||||||||||||| ||||||||||||||||||||| |||||||| ||| Sbjct 1371 TGGGACTATGGTAATCGATGTAGGAGCTTGTAAAGATGATGAATTTGCTGAATTCCTTGT 1430 Query 1527 GAAATAG 1533 |||||| Sbjct 1431 CAAATAG 1437 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 75652221315 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5