BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg909830
Length=2913
Score E
Sequences producing significant alignments: (Bits) Value
AT1G01450.1 | Symbols: | Protein kinase superfamily protein | ... 2076 0.0
AT1G01448.1 | Symbols: | other RNA | chr1:163431-166239 FORWAR... 1166 0.0
AT1G01453.2 | Symbols: | unknown protein; FUNCTIONS IN: molecu... 1037 0.0
> AT1G01450.1 | Symbols: | Protein kinase superfamily protein
| chr1:164105-165517 REVERSE LENGTH=1413
Length=1413
Score = 2076 bits (1124), Expect = 0.0
Identities = 1256/1319 (95%), Gaps = 11/1319 (1%)
Strand=Plus/Plus
Query 1435 ATGGCTGATTTCCTTTTGAAGCATTTGGGAGATGGTAATGAGAGTCCCAAGCTATTTCCG 1494
||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct 1 ATGGCTGATTTCCTTTTGAAGCATTTGGGAGATGGAAATGAGAGCCCCAAGCTATTTCCT 60
Query 1495 TCTTCTCTTCTGGTA-AACACGAAAGATTACCAAGTGaaaaaaaGATTAGGGAATGGAAG 1553
||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 61 TCTTCTCTTCTGG-ATAACACAAAAGATTACCAAGTGAAAAAAAGATTAGGGAATGGAAG 119
Query 1554 TCAGTACAAGGAGATTACTTGGTTAGGCGAGAGCTTTGCGCTTAGGCATTTCTTTGGGGA 1613
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 120 TCAGTACAAGGAGATTACCTGGTTAGGCGAGAGCTTTGCGCTTAGGCATTTCTTTGGGGA 179
Query 1614 TATTGATACTTTGCTTCC-CAAGGTTACTCCATTGCTATCTCTTTCACACCCAAACATTG 1672
||||||| |||||||||| | || ||||||||||||||||||||||||||||||||||||
Sbjct 180 TATTGATGCTTTGCTTCCTC-AGATTACTCCATTGCTATCTCTTTCACACCCAAACATTG 238
Query 1673 TTTATTACCTCTGCGGATTCACGGATGAGGAGAAGAAAGAATGTTTCTTGGTCATGGAAC 1732
| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 239 TATATTACCTCTGCGGATTCACGGATGAGGAGAAGAAAGAGTGTTTCTTGGTCATGGAAC 298
Query 1733 TGATGAGTAAAACCCTTGGTATGCACATCAAAGAGGTATGTGGTCCGAGGAAGAAGAACA 1792
||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct 299 TGATGAGGAAAACCCTTGGAATGCACATCAAAGAGGTATGTGGTCCTAGGAAGAAGAACA 358
Query 1793 CTCTCTCCCTCCCGGTCGCGGTTGATCTGATGCTTCAGATAGCTTTGGGTATGGAATATC 1852
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 359 CTCTCTCCCTCCCGGTCGCGGTTGATCTGATGCTTCAGATAGCTTTGGGTATGGAATATC 418
Query 1853 TTCACTCGAAGAGAATATACCACGGAGAGCTGAATCCATCTAACATTCTTGTCAAACCAA 1912
||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||
Sbjct 419 TTCACTCGAAGAGAATATACCACGGAGAGTTGAATCCATCAAACATTCTTGTCAAACCAA 478
Query 1913 GAAGTCACCAATCCGGAGATGGGTATCTGCTTGGGAAGATTTTTGGGTTCGGGTTGAATT 1972
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 479 GAAGTAACCAATCCGGAGATGGGTATCTGCTTGGGAAGATTTTTGGGTTCGGGTTGAATT 538
Query 1973 CTGTCAAGGGCTTCTCTAGTAAAAGTGCTTCTTTGACGAGTCAGAATGAGAATTTTCCAT 2032
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 539 CTGTCAAGGGATTCTCTAGTAAAAGTGCTTCTTTGACGAGTCAGAATGAGAATTTTCCAT 598
Query 2033 TCATATGGTATTCTCCCGAAGTTCTAGAGGAGCAAGAACAGAGCGGAACAGCAGGAAGCC 2092
|||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||
Sbjct 599 TCATATGGTATTCTCCAGAAGTTCTAGAGGAGCAAGAACAGAGTGGAACTGCAGGAAGCC 658
Query 2093 TCAAGTATACTGATAAATCTGACGTGTATAGCTTCGGGATGGTTTGCTTTGAGCTTCTGA 2152
| ||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||||
Sbjct 659 TTAAGTATAGTGATAAATCTGACGTGTATAGCTTTGGGATGGTTAGCTTTGAGCTTCTGA 718
Query 2153 CAGGTAAAGTACCATTTGAAGATAGCCACCTGCAAGGAGATAAGATGAGTAGAAACATTA 2212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 719 CAGGTAAAGTACCATTTGAAGATAGCCACCTGCAAGGAGATAAGATGAGTAGAAACATTA 778
Query 2213 GGGCTGGGGAGAGACCGCTTTTTCCATTTAATTCACCTAAA-TTCATAACAAACCTGACA 2271
|||| |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct 779 GGGCCGGGGAGAGACCGCTTTTTCCATTTAATTCACC-AAAGTTCATAACAAACCTGACA 837
Query 2272 AAACGATGCTGGCATGCTGATCCGAATCAGCGTCCAACTTTCTCATCGATAAGCAGAGTT 2331
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||
Sbjct 838 AAACGATGCTGGCATGCTGATCCCAATCAGCGTCCAACTTTCTCATCGATAAGCAGAATT 897
Query 2332 CTCCGGTATATCAAGCGATTTCTAGCTTTGAACCCAGAGTATCACAGTAGTAGCCAACAA 2391
|||||||||||||| || ||||||||||||||||| || | | |||||||||||||||||
Sbjct 898 CTCCGGTATATCAAACGGTTTCTAGCTTTGAACCCGGAATGTTACAGTAGTAGCCAACAA 957
Query 2392 GACCCGTCCATTGCTCCTCCTGTGGATTACTGGGAGATCGAGTCTAAGCTATTGCAGAAG 2451
|||||||||||||| ||| ||||||||||||| ||||||||| | |||||||||||||||
Sbjct 958 GACCCGTCCATTGCGCCTACTGTGGATTACTGCGAGATCGAGACAAAGCTATTGCAGAAG 1017
Query 2452 CTTTCATGGGAATCTACAGAGTTAACTCAA-GTTTCACAGGTTCCTTTTCAAATGTTTGC 2510
||||| ||||||||||||||| |||| ||| |||||||||||||||||||||||||||||
Sbjct 1018 CTTTCTTGGGAATCTACAGAGCTAAC-CAAAGTTTCACAGGTTCCTTTTCAAATGTTTGC 1076
Query 2511 ATATAGGGTGGTGGAACGGGCACAAACTTGTAAAAAGGATAATCTCCGGGAAACATCGGA 2570
||||||||| |||||||||||| |||| ||| |||||||||||||||||||| |||||||
Sbjct 1077 ATATAGGGTTGTGGAACGGGCAAAAACGTGTGAAAAGGATAATCTCCGGGAACCATCGGA 1136
Query 2571 ATCAGGTAGTGAATGGGCTTCCTGTAGCGAGGATGAGGGTGGGGCAGGATCAGATGAGCA 2630
|||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1137 ATCAGGAAGTGAATGGGCTTCGTGTAGCGAGGATGAGGGTGGGGCAGGATCAGATGAGCA 1196
Query 2631 GGTGTCATATGAGAAGGAGAGAAGATTGTCATGCTC---AAGTGATGTTGGTATGAGCAA 2687
| ||||||||| ||||| ||||||||||||||||| || ||||||||||||||||||
Sbjct 1197 GTTGTCATATGCCAAGGAAAGAAGATTGTCATGCTCCTCAAATGATGTTGGTATGAGCAA 1256
Query 2688 GAAGCATGTTTCAAATCTTCTGAAAAGAGCTTCTAGCCTGAAACCAATTCAAAAACCAG 2746
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1257 GAAGCAGGTTTCAAATCTTCTGAAAAGAGCTTCTAGCCTGAAACCAATTCAAAAACCAG 1315
> AT1G01448.1 | Symbols: | other RNA | chr1:163431-166239 FORWARD
LENGTH=2119
Length=2119
Score = 1166 bits (631), Expect = 0.0
Identities = 704/739 (95%), Gaps = 5/739 (1%)
Strand=Plus/Minus
Query 771 CAAATTGCTGAAATGGCCCTGTGTAAAATTGGAGAGGTGTGAAATGGAGCAATTTCGAGA 830
|||||| | | || |||| |||||| ||||| |||||||||||||||| |||||||||||
Sbjct 2058 CAAATT-CCG-AA-GGCCTTGTGTACAATTGAAGAGGTGTGAAATGGATCAATTTCGAGA 2002
Query 831 GATAGGAGAGGTATTAGGAAGCATAAGAGCGTTAATGGTGTTCAAGGACGA-CATTCAAA 889
||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct 2001 GATAGGAGAGGTATTAGGAAGCATAAGAGCGTTAATGGTGTTCAAGGAC-AGCATTCAAA 1943
Query 890 TCAACCAGCGTCAATGCTCTCTATTACTCGACCTCTTCACCGCGGCCTACGAGTCGATTT 949
||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct 1942 TCAACCAGCGTCAATGCTCTCTATTACTCGACCTCTTCACCGCAGCCTACGAGTCAATTT 1883
Query 950 CCGAATCGATGAGATCGAATCTACGCTTCAAAGAGAAGAACACTAAATGGAAGATTCTAG 1009
| | |||||| |||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1882 CTGTGTCGATGCGATCCAATCTACGCTTCAAAGAGAAGAACACTAAATGGAAGATACTAG 1823
Query 1010 AACAGCCTTTGAGGGAGCTTCTATGGGTGGTAAGAGAAGGAGAGGCTTATGTCAGAATGT 1069
||||||| || |||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct 1822 AACAGCCCTTAAGGGAGCTTCTATGGGTGGTTAGAGAAGGAGAGGCTTATGTTAGAATGT 1763
Query 1070 CTTTAGAGCCTAAACTTGGGTTTTGGGCTAAGGCTATAGTGTTGCATTGCAATAGAGATT 1129
||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||
Sbjct 1762 CTTTAGAGCCTAAACTTGGGTTTTGGGCTAAGGCTATTGTGTTGCATAGCAATAGAGATT 1703
Query 1130 GCACAGAGCTTCACATACATAACTTGCTCTCTTGTCTACCGATCATTGTCGAGGCTATTG 1189
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1702 GCACAGAGCTTCACATACATAACTTGCTCTCTTGTCTACCGATCATCGTCGAGGCTATTG 1643
Query 1190 AGACAGCGGGTGAGGTTTCAGGGTGGGATGAAGAAGAGATGAGCAAGAAGAGGTTGGTGC 1249
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1642 AGACAGCGAGTGAGGTTTCAGGGTGGGATGAAGAAGAGATGAGCAAGAAGAGGTTGGTGC 1583
Query 1250 ATTCTAACAAGTATATGAAGCAATGGAATGACTCTCAGATGTTTACCTGGAAGTTCGGGA 1309
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1582 ATTCTAACAAGTATATGAAGCAATGGAATGACTCTCAGATGTTTACCTGGAAGTTTGGGA 1523
Query 1310 GAGAGTATTTGGTGACCGAAGATTTCTGCAACCGGTTCGAGAGTGCTTGGACAGAGGACC 1369
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1522 GAGAGTATTTGGTGACCGAGGATTTCTGCAACCGGTTCGAGAGTGCTTGGACAGAGGACC 1463
Query 1370 GTTGGATTCTAATCAAGGAGCTTCAGGAGAAAAAGCAGCCCGGTTCGAGCAAACATGATT 1429
|||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1462 GTTGGATTCTGATCAAGGAGCTTCAGGAGAAAAAGCAGTCCGGTTCGAGCAAACATGAAC 1403
Query 1430 GGAAGATGGCTGATTTCCTTTTGAAGCATTTGGGAGATGGTAATGAGAGTCCCAAGCTAT 1489
|||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct 1402 GGAAGATGGCTGATTTCCTTTTGAAGCATTTGGGAGATGGAAATGAGAGCCCCAAGCTAT 1343
Query 1490 TTCCGTCTTCTCTTCTGGT 1508
|||| ||||||||||||||
Sbjct 1342 TTCCTTCTTCTCTTCTGGT 1324
Score = 1020 bits (552), Expect = 0.0
Identities = 596/617 (97%), Gaps = 3/617 (0%)
Strand=Plus/Minus
Query 1573 TGGTTAGGCGAGAGCTTTGCGCTTAGGCATTTCTTTGGGGATATTGATACTTTGCTTCC- 1631
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1327 TGGTTAGGCGAGAGCTTTGCGCTTAGGCATTTCTTTGGGGATATTGATGCTTTGCTTCCT 1268
Query 1632 CAAGGTTACTCCATTGCTATCTCTTTCACACCCAAACATTGTTTATTACCTCTGCGGATT 1691
| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1267 C-AGATTACTCCATTGCTATCTCTTTCACACCCAAACATTGTATATTACCTCTGCGGATT 1209
Query 1692 CACGGATGAGGAGAAGAAAGAATGTTTCTTGGTCATGGAACTGATGAGTAAAACCCTTGG 1751
||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct 1208 CACGGATGAGGAGAAGAAAGAGTGTTTCTTGGTCATGGAACTGATGAGGAAAACCCTTGG 1149
Query 1752 TATGCACATCAAAGAGGTATGTGGTCCGAGGAAGAAGAACACTCTCTCCCTCCCGGTCGC 1811
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1148 AATGCACATCAAAGAGGTATGTGGTCCTAGGAAGAAGAACACTCTCTCCCTCCCGGTCGC 1089
Query 1812 GGTTGATCTGATGCTTCAGATAGCTTTGGGTATGGAATATCTTCACTCGAAGAGAATATA 1871
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1088 GGTTGATCTGATGCTTCAGATAGCTTTGGGTATGGAATATCTTCACTCGAAGAGAATATA 1029
Query 1872 CCACGGAGAGCTGAATCCATCTAACATTCTTGTCAAACCAAGAAGTCACCAATCCGGAGA 1931
|||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||
Sbjct 1028 CCACGGAGAGTTGAATCCATCAAACATTCTTGTCAAACCAAGAAGTAACCAATCCGGAGA 969
Query 1932 TGGGTATCTGCTTGGGAAGATTTTTGGGTTCGGGTTGAATTCTGTCAAGGGCTTCTCTAG 1991
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 968 TGGGTATCTGCTTGGGAAGATTTTTGGGTTCGGGTTGAATTCTGTCAAGGGATTCTCTAG 909
Query 1992 TAAAAGTGCTTCTTTGACGAGTCAGAATGAGAATTTTCCATTCATATGGTATTCTCCCGA 2051
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 908 TAAAAGTGCTTCTTTGACGAGTCAGAATGAGAATTTTCCATTCATATGGTATTCTCCAGA 849
Query 2052 AGTTCTAGAGGAGCAAGAACAGAGCGGAACAGCAGGAAGCCTCAAGTATACTGATAAATC 2111
|||||||||||||||||||||||| ||||| ||||||||||| ||||||| |||||||||
Sbjct 848 AGTTCTAGAGGAGCAAGAACAGAGTGGAACTGCAGGAAGCCTTAAGTATAGTGATAAATC 789
Query 2112 TGACGTGTATAGCTTCGGGATGGTTTGCTTTGAGCTTCTGACAGGTAAAGTACCATTTGA 2171
||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 788 TGACGTGTATAGCTTTGGGATGGTTAGCTTTGAGCTTCTGACAGGTAAAGTACCATTTGA 729
Query 2172 AGATAGCCACCTG-CAA 2187
||||||||||||| |||
Sbjct 728 AGATAGCCACCTGACAA 712
Score = 819 bits (443), Expect = 0.0
Identities = 592/658 (90%), Gaps = 33/658 (5%)
Strand=Plus/Minus
Query 2264 ACCTGACAAAACGATGCTGGCATGCTGATCCGAATCAGCGTCCAACTTTCTCATCGATAA 2323
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 720 ACCTGACAAAACGATGCTGGCATGCTGATCCCAATCAGCGTCCAACTTTCTCATCGATAA 661
Query 2324 GCAGAGTTCTCCGGTATATCAAGCGATTTCTAGCTTTGAACCCAGAGTATCACAGTAGTA 2383
||||| |||||||||||||||| || ||||||||||||||||| || | | |||||||||
Sbjct 660 GCAGAATTCTCCGGTATATCAAACGGTTTCTAGCTTTGAACCCGGAATGTTACAGTAGTA 601
Query 2384 GCCAACAAGACCCGTCCATTGCTCCTCCTGTGGATTACTGGGAGATCGAGTCTAAGCTAT 2443
|||||||||||||||||||||| ||| ||||||||||||| ||||||||| | |||||||
Sbjct 600 GCCAACAAGACCCGTCCATTGCGCCTACTGTGGATTACTGCGAGATCGAGACAAAGCTAT 541
Query 2444 TGCAGAAGCTTTCATGGGAATCTACAGAGTTAACTC-AAGTTTCACAGGTTCCTTTTCAA 2502
||||||||||||| ||||||||||||||| |||| | |||||||||||||||||||||||
Sbjct 540 TGCAGAAGCTTTCTTGGGAATCTACAGAGCTAAC-CAAAGTTTCACAGGTTCCTTTTCAA 482
Query 2503 ATGTTTGCATATAGGGTGGTGGAACGGGCACAAACTTGTAAAAAGGATAATCTCCGGGAA 2562
||||||||||||||||| |||||||||||| |||| ||| ||||||||||||||||||||
Sbjct 481 ATGTTTGCATATAGGGTTGTGGAACGGGCAAAAACGTGTGAAAAGGATAATCTCCGGGAA 422
Query 2563 ACATCGGAATCAGGTAGTGAATGGGCTTCCTGTAGCGAGGATGAGGGTGGGGCAGGATCA 2622
||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 421 CCATCGGAATCAGGAAGTGAATGGGCTTCGTGTAGCGAGGATGAGGGTGGGGCAGGATCA 362
Query 2623 GATGAGCAGGTGTCATATGAGAAGGAGAGAAGATTGTCATG---CTCAAGTGATGTTGGT 2679
||||||||| ||||||||| ||||| |||||||||||||| ||||| ||||||||||
Sbjct 361 GATGAGCAGTTGTCATATGCCAAGGAAAGAAGATTGTCATGCTCCTCAAATGATGTTGGT 302
Query 2680 ATGAGCAAGAAGCATGTTTCAAATCTTCTGAAAAGAGCTTCTAGCCTGAAACCAATTCAA 2739
|||||||||||||| |||||||||||||||||||||| || | | |
Sbjct 301 ATGAGCAAGAAGCAGGTTTCAAATCTTCTGAAAAGAG---CT----T-----C---T--- 260
Query 2740 AAACCAGCCTTTGGATT-TAGTTCAGGAACAACTCCGAGAGGACGATCAAGGCATCCGCC 2798
|||||||||||| | ||||||| ||||||||||||||||||||||||||||||||
Sbjct 259 -----AGCCTTTGGATTCT-GTTCAGGGACAACTCCGAGAGGACGATCAAGGCATCCGCC 206
Query 2799 ACTAAGCCCATGTGG-G--CAAAGCATGAGAGCAAACTCTGAGAGTCAACTGATATTGAT 2855
||||||||| ||||| | ||||||||||||||||||||||||||||| |||||||||||
Sbjct 205 ACTAAGCCCTTGTGGTGGGCAAAGCATGAGAGCAAACTCTGAGAGTCAGCTGATATTGAT 146
Query 2856 AAGCCCAAGGATACGACGATCAAACTCTGGCCATGCCTCTGACTCTGAACTTTCCTAG 2913
|||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct 145 AAGCCCAAGGATACGACGATCAAACTCTGGACATGCCTCTGACTCTGAGCTTTCCTAG 88
> AT1G01453.2 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; BEST Arabidopsis
thaliana protein match is: unknown protein (TAIR:AT4G01110.1);
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422;
Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source:
NCBI BLink). | chr1:166618-167842 REVERSE LENGTH=1225
Length=1225
Score = 1037 bits (561), Expect = 0.0
Identities = 720/795 (91%), Gaps = 18/795 (2%)
Strand=Plus/Plus
Query 1 ATGGATCAAAAGCGGCCAACCATCGCTGGCGATGAAGAAATGGCGGCTGAGAAACCGTTA 60
|||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct 45 ATGGATCAAAAGCGGCCAACCATCGCCGGCGATGAAGAAATGGCGGCCGAGAAACCGTTA 104
Query 61 AAACCAGCACTCCAAAAACCACCGGGGTTT-CGTGATCAACAGAATCAACCATCAGCTCC 119
|||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct 105 CAACCGGCACTCCAAAAACCACC-TGGTTTCCGTGATCAACAGAATCAACCATCAGCTCC 163
Query 120 GCCTTCCGGAACAGGTC-GC-CGTCCAAGGCCTATCCATCC--GGCGTCACTCTA-CC-- 172
|||||| || || || | | | ||| | | | || ||| ||| | | || | ||
Sbjct 164 GCCTTCTGGGAC-GG-CAACGCTTCC-A--CGTCGCCGTCCGAGGCCT-A-TCCATCCGG 216
Query 173 CGGAGAAGAAACGGCGGTGTAGTTTCTGCCGCGTTTTCTGTTGCTGCGTGTGTATCTTCT 232
| || |||||| |||||||||||||||||||||||||||| |||||||| |||||||| |
Sbjct 217 CCGATAAGAAAAGGCGGTGTAGTTTCTGCCGCGTTTTCTGCTGCTGCGTTTGTATCTTAT 276
Query 233 TGGCCGTGATTCTCCTCATCTTTCTCATCGCTGTGGCGGTTTTCTTCCTTTGGTACAGCC 292
| ||||||||||||||| || | |||||||| || || ||||||||||||||||||||||
Sbjct 277 TCGCCGTGATTCTCCTCCTCATCCTCATCGCCGTCGCTGTTTTCTTCCTTTGGTACAGCC 336
Query 293 CGAAACTACCCGTCGTCCGCCTAGCCTCATTCAAAATCAGCAATTTCAACTTTTCCGACG 352
|||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct 337 CGAAACTACCCGTCGTCCGCCTAGCCTCGTTCAAAATCAGCAACTTCAACTTTTCCGACG 396
Query 353 GAAACTCCGACGACGGATGGTCATTTTTGACGGCGGATACAACGGCGGTGCTCGATTTCA 412
|||| ||||||||||||||||| |||||| |||||||||||||| ||||||||||||| |
Sbjct 397 GAAAATCCGACGACGGATGGTCTTTTTTGTCGGCGGATACAACGTCGGTGCTCGATTTTA 456
Query 413 GAAACCCTAACGGAAAGCTAACGTTTTATTACAGAGATGCTGACGTGGCTGTGATTCTCG 472
|||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct 457 GAAACCCTAACGGAAAGCTAACGTTTTATTACGGAGATACTGACGTGGCTGTGATTCTCG 516
Query 473 GAGAGAAAGACTTTGAGACTAACCTA-AGGTCAACGAAAGTCAAAGGCTTTATTGAGAAG 531
||||||||||||||||||| |||||| || ||||||||||||||||||||||||||||||
Sbjct 517 GAGAGAAAGACTTTGAGACCAACCTAGAG-TCAACGAAAGTCAAAGGCTTTATTGAGAAG 575
Query 532 CCAGGAAATCGGACGGCTGTGATTGTCCCAACGAGGGTGACGAAACGACAGGTGGATGAT 591
||||| ||||||||||||||||||||||| |||| ||||| |||||||||||||||||||
Sbjct 576 CCAGGGAATCGGACGGCTGTGATTGTCCCGACGACGGTGAGGAAACGACAGGTGGATGAT 635
Query 592 CCAACGGCAAAGAGGCTACAGGCAGAGCTGAAGGGTAAGAAGCTGCTGGTGACAGTGACA 651
|| ||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||
Sbjct 636 CCGACGGCAAAGAGGCTACAGGTAGAGCTGAAGAGTAAGAAGCTGTTGGTGACAGTGACA 695
Query 652 GCTAAAACGAAGGTAGGATTGGCTGTGGGCAGTCGCAAGATTGTTGCTGTGGGCGTTAGT 711
||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||
Sbjct 696 GCTAAGACGAAGGTAGGATTGGCTGTGGGCAGTCGTAAGATTGTTACTGTGGGCGTTAGT 755
Query 712 CTCAGATGCGGAGGCGTTAGATTACAGACCCTTGATTCGCAAATGGCCAAATGCACCATC 771
||||||||||||||||||| ||||||||| ||||| || |||||||| |||||||||||
Sbjct 756 CTCAGATGCGGAGGCGTTATATTACAGACGCTTGACTCAAAAATGGCCCAATGCACCATC 815
Query 772 AAATTGCTGAAATGG 786
||| |||| ||||||
Sbjct 816 AAAATGCTCAAATGG 830
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 144781797498
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5