BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg910140 Length=2898 Score E Sequences producing significant alignments: (Bits) Value AT1G04650.1 | Symbols: | unknown protein; Has 30201 Blast hits... 4512 0.0 > AT1G04650.1 | Symbols: | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr1:1294893-1299002 REVERSE LENGTH=3093 Length=3093 Score = 4512 bits (2443), Expect = 0.0 Identities = 2722/2857 (95%), Gaps = 17/2857 (1%) Strand=Plus/Plus Query 49 TGGGAAGACTTCACTTGTCTTGACGTTTCCCAGTGTTTGTTGAACAAGGCAATTCTGCCT 108 |||||||| ||||| |||||||||||||||| |||||||||||||||||| ||||||||| Sbjct 247 TGGGAAGATTTCACATGTCTTGACGTTTCCCTGTGTTTGTTGAACAAGGCGATTCTGCCT 306 Query 109 GTCACTTCTAAATACCTCGCTTTGGATCGGCCTGATTGCTCCCATTACTTTCTTTCTTTT 168 || |||| |||||||||||||||||||||||||||||||| || ||||||||| ||||| Sbjct 307 GTGGCTTCAAAATACCTCGCTTTGGATCGGCCTGATTGCTCACACTACTTTCTTGCTTTT 366 Query 169 GGTATTAAGGTCAGCCAATGGTGTGCTAAACATTTAAACATGTCTGTGATGTCGATGGAG 228 | ||||||||| |||||||||||||| |||||||||||||||||||| ||||| |||||| Sbjct 367 GCTATTAAGGTAAGCCAATGGTGTGCCAAACATTTAAACATGTCTGTTATGTCCATGGAG 426 Query 229 GAGTCTCAAGAGGAAGAGCATTCCAACATTTTCTTTCAGCTTCTTTTGGATTATCTTCAT 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 427 GAGTCTCAAGAGGAAGAGCATTCCAACATTTTCTTTCAGCTTCTTTTGGATTATCTTCGT 486 Query 289 TTTTCTGCCTCAAGCTTTACTGCTATTGGAAAAACTTGTTTCATGACTGATGAGGCCTCA 348 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 487 TTTTCTGCCTCAAGCTTTACTGCTATTGGAAAAACTTGTTTCATGACTGATGATGCCTCA 546 Query 349 GCTGTTACAGTTCATAAGTTTGTTTCAGAGCAGCTGAATTTGACAAAGGAGGTGATAATG 408 ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct 547 GCTGTTACAGTTCATAAGTTTGTTTCAGAGCAGCTCAATTTGACAAAGGAGTTGATAATG 606 Query 409 AATGCCAAGAAAGTTGAATCCTTTTCCTCGGAGATTTTTAAGGCTGCGCAAGTGGTAATT 468 ||| |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 607 AATTCCAAGAAAGTCGAATCCTTTTCCTCGGAGATTTTTAAGGCTGTGCAAGTGGTAATT 666 Query 469 GAGTCTACTGTTCGTCTGTGCAAAGAACACTCTCCAGCAGTGAATCATGACGT---TGAA 525 || |||||||||||||||||||||||| |||||| | ||||||||| ||| || |||| Sbjct 667 GATTCTACTGTTCGTCTGTGCAAAGAATACTCTCAAACAGTGAATCGTGAGGTAAGTGAA 726 Query 526 ATGAAGACTAATGGAAATTTAGGAAAGGCAAAGATGGAGGAAGGCAACGCTGTGGGTAAT 585 |||||||| | |||| || |||||||||||| |||||||||||||||||||||||||||| Sbjct 727 ATGAAGACGAGTGGACATGTAGGAAAGGCAAGGATGGAGGAAGGCAACGCTGTGGGTAAT 786 Query 586 TTGGTGAGCATGATAACGCTGGGAGTTAAATCTCTGAGTGATTTGGGTATGCTTGCTGCA 645 |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| Sbjct 787 TTGGTGAGCATGATTACGCTGGGAGTTAAATCTCTGAGTGAATTGGGTATGCTTGCTGCA 846 Query 646 AGAGATGGTGGCAATCTTGTGGCCATTCTTAATACATCTTGGAAGGGTGTGATTACATTG 705 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 847 AGAGATGGTGGAAATCTTGTGGCCATTCTTAATACATCTTGGAAGGGTGTGATTACATTG 906 Query 706 CTTCAGA-TAGACAAGCAGACATTGGTATCTAAGGTAGATGTAGGAGAAATTATCTTAAA 764 ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 907 CTTCA-ACTAGACAAGCAGACATTGGTATCTAAGGTAGATGTAGGAGAAATTATCTTAAA 965 Query 765 GCTAATATCACTGATCAAGAAGTCCCTGAGATTTGCTGCTGAGGCTTGGTCTTGCTCGGT 824 ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| Sbjct 966 GCTAATATCACTGATCAAGGACTCCCTGAGATTTGCTGCTGAGGCTTGGTCTTGCTCGGT 1025 Query 825 GAAGGAAAACATATCTGCAACAGAAGCCCGAAGGGTCTTTCTTCCTGTGAAATTTTATCT 884 ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| Sbjct 1026 GAAGGAAAACATATCTGCAACGGAAGCCAGAAGGGTCTTTCTTCCTGTGAAATTTTATCT 1085 Query 885 TATCAATGCTGTTAAAGTTGTGGCGCTGTTTCCAAGCCAGGCGTCTATGGTGTTCAAGGA 944 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1086 TATCAATGCTGTTAAAGTTGTGGCGCTGTTTCCAAGCCAGGCGTCTATGGTGTCCAAGGA 1145 Query 945 AATTGCACTATGCATCTTGATGATCTCTGCTTTCAAAGTTTCACTGAGCCAACAAACTCT 1004 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1146 TATAGCACTATGCATCTTGATGATCTCTGCTTTCAAAGTTTCACTGAGCCAACAAACTCA 1205 Query 1005 TGGCAAATCTGCAGGTGAAGTAATGACTGATCTTCTAGAGAAAACAACTGTAGATCTTCT 1064 ||| ||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1206 TGGAAAATCCGCAAGTGAAGTAATGACTGATCTTCTGGAGAAAACAACTGTAGATCTTCT 1265 Query 1065 AGGTGCACTGTTAAATGCAGCTGAACTAACACAGGAATTCAGGCTCACACTTCTTGATTC 1124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1266 AGGTGCACTGTTAAATGCAGCTGAACTAACACAGGAATTCAGGCTCACACTTCTTGATTC 1325 Query 1125 ATTGTTCGTTGATGAACAAGGTTTCTCAAACCAAATTTGTAAGAAACAGAGCCATGATTC 1184 |||||||||||||||| || |||||||||||| |||||||| |||||||||||||| Sbjct 1326 ATTGTTCGTTGATGAA-----TT-CTCAAACCAAATCTGTAAGAAGCAGAGCCATGATTC 1379 Query 1185 TCACACAAAAACATCATTGGTGGATATCTTGTCTTTATCTGTTGAATCTGCGACAAGTGC 1244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1380 TCACACAAAAACATCATTGGTGGATATCTTGTCTTTATCTGTTGAATCTGCGACAAGTGC 1439 Query 1245 CAGAGATTTGCTCCTGGCCCGAGTTATATTGTTCCAATCTGTCATGAGGTATTCTTCCGA 1304 |||||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||| Sbjct 1440 TAGAGATTTGCTCCTGGCCCGAGTTGTATTGTTCCAGTCTGTCATGAGGTATTCTTTCGA 1499 Query 1305 GCTTGACAAAGATGCAAAGCTTGCAATCACCACAAAGCTGCAATGGTTTCTCGACATATT 1364 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1500 GCTTGACAAAGATGCAAAGCTTGCAATCACCACAAAGCTGCAATGGCTTCTCGACATATT 1559 Query 1365 AGCGGACAAAGAGATTTATTCTTCAGTCCTTTCCTCTCAGCTACCAATGGCAGATGGTTC 1424 ||| ||||||||| |||| |||||||| |||||||||||||||||||||||||||||||| Sbjct 1560 AGCAGACAAAGAGGTTTACTCTTCAGTTCTTTCCTCTCAGCTACCAATGGCAGATGGTTC 1619 Query 1425 TGGGAAGATAATAATCTGGGAATCAATGTATTTAGCTCTGCTTCTGTCTTTCAAAACCCT 1484 |||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||| Sbjct 1620 TGGGAAGATAGTAATCTGGGAATCAATGTATTCAGCTCTGCTTCTGTCTCTCAAAACCCT 1679 Query 1485 TGTGATCATACTCTCTTCAACTCCTGCCTGGGAAGAGCTTGAAACATTCATACTCCAGAA 1544 | ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| Sbjct 1680 TATGATCATACTCTCTTCAACTCCTGCCTGGGAAGAGCTTGAAACATTCCTACTTCAGAA 1739 Query 1545 TCTCTTGCATCCTCACTTCTTGTGTTGGCAGATAGTCATGGAACTCTGGTGCTTCTGGGT 1604 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1740 TCTCTTGCATCCTCACTTCTTGTGTTGGCAGATAGTCATGGAACTCTGGTGCTTCTGGGT 1799 Query 1605 TCGCCATGCCACTGAGGATTTGGTGGTCGATATGATTAATCAACTTTGTACATTCATGAT 1664 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| || Sbjct 1800 TCGTCATGCCACTGACGATTTGGTGGTCGATATGATTAATCAACTTTGTACATTCATTAT 1859 Query 1665 GTCAATGCCATCATCAGAAACACCGCTTTGCCCAGATTCCATGCTCAGAAGAACTACAAA 1724 |||||||||||||||||||||||| ||||| ||||||||| | ||||||||||||||||| Sbjct 1860 GTCAATGCCATCATCAGAAACACCTCTTTGTCCAGATTCCGTTCTCAGAAGAACTACAAA 1919 Query 1725 GTCCATCTGCTTTCTTCTTACCCACAGCCCCAAATCTTTAACAGTTCAAGTTTACAAAAA 1784 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct 1920 GTCCATCTGCTTTCTTCTTACCCATAGCCCCAAATCTTTAACAGTTCAAGTTTACAAACA 1979 Query 1785 TATTTCCACTGAGAGCAGATCTGACTC-TGCACCAGGTGTATATCTAGCATTGCTGTTAG 1843 |||||| |||||||||||||||||| | |||||| | ||||||||||||||||||||||| Sbjct 1980 TATTTCTACTGAGAGCAGATCTGAC-CATGCACCTGATGTATATCTAGCATTGCTGTTAG 2038 Query 1844 ACGGGTTTCCGCTAAATTTTCTTCCAGACAGAATCAAAAACGACGCAAAGAGACAGATAT 1903 |||||||||| || |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 2039 ACGGGTTTCCACTGAATTTTCTTCCAGACAGAATAAAAAACGACGCAAAGAGACAGATAT 2098 Query 1904 TTGCAGATTTCTTCAACTTCATCGAGAAATTT-ATTGAGAAACCATCATATTCCTCCAGA 1962 ||||||||||||||||||||||||||||||| || |||||||| ||| ||||||||||| Sbjct 2099 TTGCAGATTTCTTCAACTTCATCGAGAAATTCGAT-GAGAAACCGTCAAATTCCTCCAGA 2157 Query 1963 GACACTGTGCTTGGAGCTCCAGTTTTCACACTCTCTGCTTGCCTTCGGATACTAAAGACG 2022 ||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||| | Sbjct 2158 TACACTCTGCTTGGAGCTCCAGTTTTCACAGTATCTGCTTGCCTTCGGATACTAAAGATG 2217 Query 2023 AGCATATCAGAGATTGATGCCAAAACTCTGAACTTTGTCGTCGCTCTCATTCAAAAGTAC 2082 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2218 AGCATATCAGAGATTGATGCCAAAACTCTGAACTTTGTCGTCGCTCTCATTCAAAAGTAC 2277 Query 2083 AGAAACTCCAAAGATGAAACGACCAAGGATCGTTACAGTGAGATTCTCAGCGAAACACTA 2142 ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| || Sbjct 2278 AGAAACTCCAAAGATGAAACGACGAAGGAACGTTACAGTGAGATTCTCAGCGAAACATTA 2337 Query 2143 TCAATCATCTCAAGAAGCGATCAGCTATACACTTGCCAAGAGATGGATAATGTCATAACA 2202 || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 2338 TCTATCATCTCAAGAAGCGAACAGCTATACACTTGCCAAGAGATGGATAATGTCATAACA 2397 Query 2203 GAGCTTCAAAAGCTATTCATTTCAGAAACTGATCATCATCATAATCATCTCCGTAAGTCC 2262 ||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||| Sbjct 2398 GAGCTTCAAAAGCTATTCAATTCAGAAACTAATCATCATCATAATCATCTTCGTAAGTCC 2457 Query 2263 AAGCCAAACCTTGCTCTCTTCTTGTCAGGACTCAGCAAATACGAGATGTCTGAAACCGAA 2322 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 2458 AAGCCAAACCTTGCTCTCTTCTTGTCAGGACTCAGCAAATACGAGATGTCTGAAACCAAA 2517 Query 2323 ACGTGTCCAAAGAGCCGTGCGGTTTGGGAACTCTACCATTTGCTTCTCAAGAAACGCCAC 2382 | ||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||| Sbjct 2518 AAGTGTCCAAAGAGCATTGCGGTTTGGGAACTCTACCATATGCTTCTCAGGAAACGCCAC 2577 Query 2383 TGGGCTTTGGTACACCATGCGGTTACTGCGTTTGGATACTTCTGTGCACGTACAAGCTGT 2442 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 2578 TGGGCTTTGGTACACCACGCGGTTACTGCGTTTGGATACTTCTGTGCACGTACAAGCTGT 2637 Query 2443 AATCAGCTATGGAGATTCGTACCTGAAGACGCAGCTCTAGCCTTCGATATACCTTCTGGA 2502 |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| Sbjct 2638 AATCAGCTATGGAGATTCGTACCTGAAGACGCGGCTCTAGCCTTCGATATAGCTTCTGGA 2697 Query 2503 AAAGAAGCTAAAACAGAGCGGTTCATGTCGGAACTAAAGATGTTTTTGGAGAAAGAACAA 2562 |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 2698 AAAGAAGCGAAAACAGAGCGGTTCATGTCGGAATTAAAGATGTTTTTGGAGAAAGAACAA 2757 Query 2563 GCGCTTCTCTCAATCACACCTTCAGAAGAGGAACTCAAGTTACTTGCGAAAGAAGGCACC 2622 |||||||| |||||||||||||||||||| ||||| |||||||| |||||||||||||| Sbjct 2758 GCGCTTCTTTCAATCACACCTTCAGAAGAAGAACTGGAGTTACTTTCGAAAGAAGGCACC 2817 Query 2623 AAGGTTAAGGCAACAGTGCAGAAGCTTCTAGAAGGAAGAAGCCAGAGGTCAATGGAAGTA 2682 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2818 GAGGTTAAGGCAACAGTGCAGAAGCTTCTAGAAGGAAGAAGCCAGAGGTCAATGGAAGTA 2877 Query 2683 GAGAAACGACCAAACAAGAAAAGGAAACTTCCAGAAGGAATTTGCAGAGGAATGGAGTTA 2742 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2878 GAGAAACGACCGAACAAGAAAAGGAAACTTCCAGAAGGAATTTGCAGAGGAATGGAGTTA 2937 Query 2743 TTGCAGAATGGAGTGAAGAGGATTAAGGAAGGTTTAAGCGAATTGAGGTCAGATGAAAAT 2802 |||||||||||||||||||||||||| || ||||||| |||||||||||||||||||||| Sbjct 2938 TTGCAGAATGGAGTGAAGAGGATTAACGAGGGTTTAAACGAATTGAGGTCAGATGAAAAT 2997 Query 2803 GAGAGTGAAGAGTTTCAAAAGAGTTTA-CTGAATCAGTTTTCGTGTCTTGAAGATTTAGT 2861 ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| || Sbjct 2998 GAGAGTGAAGAGTTTCAAAAGAGTTTATC-GAATCAGTTTTCGTGTCTTGAAGATTTGGT 3056 Query 2862 CTCTCATTTGTTAAGCCTCACCGCAGCTTCGGACTAA 2898 ||||||||||||||||||||||||||||||||||||| Sbjct 3057 CTCTCATTTGTTAAGCCTCACCGCAGCTTCGGACTAA 3093 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 144029293353 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5