BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg910258 Length=438 Score E Sequences producing significant alignments: (Bits) Value AT1G05740.1 | Symbols: | Eukaryotic protein of unknown functio... 691 0.0 > AT1G05740.1 | Symbols: | Eukaryotic protein of unknown function (DUF842) | chr1:1720674-1721309 FORWARD LENGTH=438 Length=438 Score = 691 bits (374), Expect = 0.0 Identities = 417/438 (95%), Gaps = 2/438 (0%) Strand=Plus/Plus Query 2 TGGATCACAAGGCAGTTGCGGAAGAACAAATCGTATTGGAGAGGATTAGGAGAAAAATCG 61 |||||| || ||||||||||||||| |||||| ||||||||||| ||||||||||||||| Sbjct 2 TGGATCGCATGGCAGTTGCGGAAGAGCAAATCCTATTGGAGAGGGTTAGGAGAAAAATCG 61 Query 62 AAGAAGTAAATGCATCTGGTCAGTCGCAGCTCTCTCCTATTCAAGAACATATCAGTTTCA 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 62 AAGAAGTAAATGCATCTGGTCAGTCGCAGCTCTCTCCTATTCAAGAACATATCAGTTTCA 121 Query 122 CCCTTCTGATTGATGCCCCTTTGAATAATGATGAATTGGAGCAAGCTTATTTCAAATG-T 180 ||||||||||| |||| ||||||| | ||||||||||| ||||||||||||||||||| | Sbjct 122 CCCTTCTGATTTATGCACCTTTGATTGATGATGAATTGCAGCAAGCTTATTTCAAATGCT 181 Query 181 GCAAACGAGTGCTTTGAGAAAAGAAGAAAGCAAGAGGTGACAACCAACTGTGTTGAGCTC 240 |||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||| Sbjct 182 -CAAACGAGTGCTTTGAGAAAAGAAGAAAGCCAGAAGTGACAACTAACTGTGTTGAGCTC 240 Query 241 TGCCGTGTTCCCGTTGTTAATTCTCAACAGCAATTCGATAGCGATAAGGCCAAGTTTCAG 300 || ||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||| Sbjct 241 TGTCGTGTTCCCGTTGCTAAATCTCAACAGCAATTCGATAGCGATATGGCCAAGTTTCAG 300 Query 301 GATAGGATGAACAGATCTCTCATGGTATGTCAAGACAAATTCGAGGCTGCAAAGCTACTA 360 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 GATAGGATGAACAGATCTCTCATGGTATGTCAAGACAAATTCGAGGCTGCAAAGCTACTG 360 Query 361 AATATGAACAGGATTGATGCCGCCAAAGATATGGAGGGTTGCGTCAACGATGCAGCTGCA 420 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 361 AATATGAACAGGATTGATGCCGCCAAAGATATGGAGGGTTGCGTAAACGATGCAGCTGCA 420 Query 421 GCATTACTTGGCGGCTAA 438 |||||||||||||||||| Sbjct 421 GCATTACTTGGCGGCTAA 438 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 20810848086 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5