BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg910293
Length=900
Score E
Sequences producing significant alignments: (Bits) Value
AT1G06100.1 | Symbols: | Fatty acid desaturase family protein ... 1419 0.0
AT1G06120.1 | Symbols: | Fatty acid desaturase family protein ... 953 0.0
AT1G06090.1 | Symbols: | Fatty acid desaturase family protein ... 941 0.0
AT1G06360.1 | Symbols: | Fatty acid desaturase family protein ... 641 0.0
AT1G06350.1 | Symbols: | Fatty acid desaturase family protein ... 540 1e-152
> AT1G06100.1 | Symbols: | Fatty acid desaturase family protein
| chr1:1851530-1853019 FORWARD LENGTH=900
Length=900
Score = 1419 bits (768), Expect = 0.0
Identities = 858/902 (95%), Gaps = 4/902 (0%)
Strand=Plus/Plus
Query 1 ATGAGTGACACCACTAAGGACGATGGCTCTAGCCAAAACAAATCAGTGCGTAAGGAAAAA 60
|||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1 ATGAGTGAGACCACTAAGGACGATGGCTCTAGCCAAAAAAAATCAGTGCGTAAGGAAAAA 60
Query 61 AGAGCGCCTTTTTTAAGGAAATGGACCCAGTTCGATGTTGGGAGAGCTTCGACTGTTGGA 120
|||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 AGAGCGTATGTTTTAAGGAAATGGACCCAGTTCGATGTTGGGAGAGCTTCGACTGTTGGA 120
Query 121 ATCGTGCATCTGTTGTGTCTATTGGCTCCTTTTAACTACAAATGGGAAGCATTGCGGTTC 180
| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 121 ACCGTGCATCTGTTGTGTCTATTGGCTCCTTTTAACTACAAATGGGAAGCATTCCGGTTC 180
Query 181 GGTACAATTATCACCATAGTGACAAACCTCAGCATTACATTCTCGTACCATAGGAACTTG 240
|||| |||| || ||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct 181 GGTATAATTCTCGCCATACTGACAAACCTCTGCATTACATTCTCGTACCATAGGAACTTG 240
Query 241 ACTCACCGGAGCTTTACA-CTACCTAAATGGCTTGAATATCCATTCGCTTATTCTGCTCT 299
|||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||
Sbjct 241 ACTCACCGGAGCTTTA-AGCTACCGAAATGGCTTGAATATCCATTCGCTTATTCTGCTCT 299
Query 300 TTTTGCACTTCAGGGTGATCCATTGGATTGGGTGAGCATTCATAGATTCCATCACCAGTT 359
||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 300 TTTGGCACTTCAGGGTGATCCATTGGATTGGGTGAGCATACATAGATTCCATCACCAGTT 359
Query 360 CACAGATTCTGACCGTGATCCACATAGCCCTATCGAAGGATTCTGGTTCAGTCATGTTTT 419
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 360 CACAGATTCTGACCGTGATCCACATAGCCCTATAGAAGGATTCTGGTTCAGTCATGTTTT 419
Query 420 GTGGATATTTGACTCCGAATATATCAGAGAAAAGTGCGGAAGACGTAACAACGTGATGGA 479
||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct 420 GTGGATATTTGACACCGATTATATCAGAGAAAAGTGTGGAAGACGTAACAACGTGATGGA 479
Query 480 CTTGAAGCAACAATGGTTCTACAGGTTTCTAAAAAAGACATTGGTTCTCCACATCTTTGT 539
||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |
Sbjct 480 CTTGAAGCAACAATGGTTCTATAGGTTTCTAAAAAAGACGTTGGTTCTCCACATCTTAGC 539
Query 540 ATTTTGGACCCTCATCTACTTATGGGGTGGTCTACCTTACCTAACTTGGACCGTGGGTTC 599
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 540 ATTTTGGACCCTCATCTACTTATGGGGTGGTCTACCTTACCTAACTTGGACTGTGGGTTT 599
Query 600 TGGAGGAG-CATTCGCTTACCACGGGACTTGGCTCGTAAACTCGGCATGCCATATTTGTG 658
|||||||| ||| | |||||| ||||||||||||||||| |||||||||||||||||||
Sbjct 600 TGGAGGAGTAATT-GGTTACCATGGGACTTGGCTCGTAAATTCGGCATGCCATATTTGTG 658
Query 659 GTTCGCAAGTGTGGCACACCAATGACACCTCTCGTAACGTTTGGTGGCTAGCGCTATTGA 718
||||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||
Sbjct 659 GTTCGCAAGCGTGGCAAACCAATGACACCTCACGTAACGTTTGGTGGCTAGCGCTATTGA 718
Query 719 CTATGGGAGAGAGCTGGCACAACAACCACCATGCCTTTGAGGCGTCGGCTAGGCATGGAC 778
||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||
Sbjct 719 CTATGGGAGAGAGCTGGCACAACAACCACCATGCCTTTGAGACGTCGGCTAGGCACGGAC 778
Query 779 TAGAATGGTATCAGTTAGACATAACTTGGTACCTCATTCGGTTCTTTCAGGCTCTCGGCT 838
|||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| |
Sbjct 779 TAGAATGGTATCAGTTAGACATAACTTGGTACCTCATTTGGTTCTTCCAGGCTCTCGGTT 838
Query 839 TAGCCACCAATGTCAAATTGCCTACCGATGATCAGAAACGCAAGATGGCTATCCCTCGTT 898
||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||
Sbjct 839 TAGCCACCAATGTCAAATTACCTACCGATGCTCAGAAACGCAAGATGGCTATCCGTCGTT 898
Query 899 AA 900
||
Sbjct 899 AA 900
> AT1G06120.1 | Symbols: | Fatty acid desaturase family protein
| chr1:1855943-1857718 FORWARD LENGTH=1122
Length=1122
Score = 953 bits (516), Expect = 0.0
Identities = 773/896 (86%), Gaps = 22/896 (2%)
Strand=Plus/Plus
Query 15 TAAGGACGATGGCTCTAGCCAAAACAAATCAGTGCGTAAGGAAAAAAGAGCGCCTT--TT 72
|||||||||| |||||||||||| |||| ||||||||||||||||||||||| || ||
Sbjct 35 TAAGGACGATAGCTCTAGCCAAAGCAAAGCAGTGCGTAAGGAAAAAAGAGCG--TTCCTT 92
Query 73 TTAAGGAAATGGACCC-AGTTCGATGTTGGGAGAGCTTCGACTGTT-GGAATCGTGCATC 130
|| ||||||||||||| ||| ||||| ||||| |||| ||||| || | |||||||
Sbjct 93 TTCAGGAAATGGACCCGGGTT-GATGTAATGAGAGTTTCGGCTGTTGGGGCT-GTGCATC 150
Query 131 TGTTGTGTCTATTGGCTCCTTTTAACTACAAATGGGAAGCATTGCGGTTCGGTACAATTA 190
| ||||||||||||||||| |||||||||| ||||||||| || ||||| | | | ||
Sbjct 151 TATTGTGTCTATTGGCTCCGTTTAACTACACATGGGAAGCTTTCCGGTTTGCTGCTATGG 210
Query 191 TCACCATAGT-GACAAACCTCAGCATTACATTCTCGTACCATAGGAACTTGACTCACCGG 249
|| ||| | ||| || |||||||||||||| || |||||||||||||||||||||||
Sbjct 211 TCGGTATA-TCGACTAATCTCAGCATTACATTTTCATACCATAGGAACTTGACTCACCGA 269
Query 250 AGCTTTACA-CTACCTAAATGGCTTGAATATCCATTCGCTTATTCTGCTCTTTTTGCACT 308
||||||| | || ||||||||||||||||||||||||||||| ||||| ||||| || ||
Sbjct 270 AGCTTTA-AGCTTCCTAAATGGCTTGAATATCCATTCGCTTACTCTGCCCTTTTCGCGCT 328
Query 309 TCAGGGTGATCCATTGGATTGGGTGAGCATTCATAGATTCCATCACCAGTTCACAGATTC 368
||||||| ||||| | ||||||||||| | ||||| |||||||||||||||||||||||
Sbjct 329 TCAGGGTCATCCAATAGATTGGGTGAGTACACATAGGTTCCATCACCAGTTCACAGATTC 388
Query 369 TGACCGTGATCCACATAGCCCTATCGAAGGATTCTGGTTCAGTCATGT-TTTGTGGATAT 427
|||||||| |||||||| |||||||||||||| ||||||||||| || ||| |||||||
Sbjct 389 GGACCGTGACCCACATAGTCCTATCGAAGGATTTTGGTTCAGTCACGTCTTT-TGGATAT 447
Query 428 TTGACTCCGA-ATATATCAGAGAAAAGTGCGGAAGACGTAACAACGTGATGGACTTGAAG 486
| ||| || | || |||||||||||||| ||| ||||| ||||||||||||||||||||
Sbjct 448 TCGACACC-AGTTACATCAGAGAAAAGTGTGGAGGACGTGACAACGTGATGGACTTGAAG 506
Query 487 CAACAATGGTTCTACAGGTTTCTAAAAAAGAC-ATTGGTTCTCCACATCTTTGTATTTTG 545
|||||||||||||| |||||||| |||| || ||||| |||||||||||| ||||||
Sbjct 507 CAACAATGGTTCTATAGGTTTCTTCAAAACACAATTGG-TCTCCACATCTTAACATTTTG 565
Query 546 GACCCTCATCTACTTATGGGGTGGTCTACCTTACCTAACTTGGACCGTGGGT-TCTGGAG 604
|| |||| |||| ||||||||||||||||||||||||||||||| ||||||| | |||||
Sbjct 566 GATCCTCGTCTATTTATGGGGTGGTCTACCTTACCTAACTTGGAGCGTGGGTGT-TGGAG 624
Query 605 GAGCATTCGCTTACCACGGGACTTGGCTCGTAAACTCGGCATGCCATATTTGTGGTTCGC 664
||||| ||| |||||| | |||||||||| |||||||||||||||||||||| |||||||
Sbjct 625 GAGCAATCGGTTACCATGCGACTTGGCTCATAAACTCGGCATGCCATATTTGGGGTTCGC 684
Query 665 AAGTGTGGCACACCAATGACACCTCTCGTAACGTTTGGTGGCTAGCGCTATTGACTATGG 724
|| ||| |||| || ||||||||||||||| |||||||||||| || ||| || ||||
Sbjct 685 GAGCATGGAACACTAAGGACACCTCTCGTAACATTTGGTGGCTAGGGCCATTCACGATGG 744
Query 725 GAGAGAGCTGGCACAACAACCACCATGCCTTTGAGGCGTCGGCTAGGCATGGACTAGAAT 784
||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||
Sbjct 745 GAGAGAGCTGGCACAACAACCACCATGCCTTTGAGGCGTCGGCTAGGCACGGGCTGGAAT 804
Query 785 GGTATCAGTTAGACATAACTTGGTACCTCATTCGGTTCTTTCAGGCTCTCGGCTTAGCCA 844
|||||||| ||||| |||| |||||||||||| ||||||| |||| |||||| |||||||
Sbjct 805 GGTATCAGGTAGACTTAACGTGGTACCTCATTTGGTTCTTCCAGGTTCTCGGTTTAGCCA 864
Query 845 CCA-ATGTCAAATTGCCTACCGATGATCAGAAACGCAAGATGGCTATCCCTCGTTA 899
| | ||||||||||||||||||||| |||||| || || ||| || | |||||||
Sbjct 865 C-AGATGTCAAATTGCCTACCGATGCTCAGAAGCGAAAAATGTCTTTAGCTCGTTA 919
> AT1G06090.1 | Symbols: | Fatty acid desaturase family protein
| chr1:1847883-1849693 FORWARD LENGTH=1131
Length=1131
Score = 941 bits (509), Expect = 0.0
Identities = 776/904 (86%), Gaps = 22/904 (2%)
Strand=Plus/Plus
Query 7 GACACCACTAAGGACGATGGCTCTAGCCAAAACAAATCAGTGCGTAAGGAAAAAAGAGCG 66
|||||||| ||||||||||| |||||||||| ||| | |||||| ||||||||||||
Sbjct 45 GACACCACAAAGGACGATGGGTCTAGCCAAAGTAAAGCGGTGCGTGGGGAAAAAAGAGC- 103
Query 67 CCT-TTTTTAAGGAAATGGACCCAGTTCGATGTTGGGAGAGCTTCGACTGTT-GGAATCG 124
| ||||| ||||||||||||| | ||||| | | |||||||||| ||||| || | |
Sbjct 104 ATTCTTTTTCAGGAAATGGACCCGGATCGATATAGCGAGAGCTTCGGCTGTTGGGGCT-G 162
Query 125 TGCATCTGTTGTGTCTATTGGCTCCTTTTAACTACAAATGGGAAGCAT-TGCGGTTCGGT 183
||||||| |||||||| |||||||| |||||||| ||||||||||| | | |||||||||
Sbjct 163 TGCATCTATTGTGTCTGTTGGCTCCGTTTAACTATAAATGGGAAGC-TCTCCGGTTCGGT 221
Query 184 ACAATTATCACCATAGTGACAAACCTCAGCATTACATTCTCGTACCATAGGAACTTGACT 243
||| || | |||||||| | || ||||||||||| || ||||||||||||||||||
Sbjct 222 GTGATTCTCGCTATAGTGACTAGTCTTAGCATTACATTTTCATACCATAGGAACTTGACT 281
Query 244 CACCGGAGCTTTACA-CTACCTAAATGGCTTGAATATCCATTCGCTTATTCTGCTCTTTT 302
||| |||||||| | || ||||||||||||||||||||||||||||| ||||| |||||
Sbjct 282 CACAAGAGCTTTA-AGCTTCCTAAATGGCTTGAATATCCATTCGCTTACTCTGCCCTTTT 340
Query 303 TGCACTTCAGGGTGATCCATTGGATTGGGTGAGCATTCATAGATTCCATCACCAGTTCAC 362
|| ||||||||| ||||| | ||||||||||| | ||||| |||||||||||||||||
Sbjct 341 CGCGCTTCAGGGTCATCCAATAGATTGGGTGAGTACACATAGGTTCCATCACCAGTTCAC 400
Query 363 AGATTCTGACCGTGATCCACATAGCCCTATCGAAGGATTCTGGTTCAGTCATGT-TTTGT 421
|||||| |||||||| |||||||| |||||||||||||||||||||||||| || ||| |
Sbjct 401 AGATTCAGACCGTGACCCACATAGTCCTATCGAAGGATTCTGGTTCAGTCACGTCTTT-T 459
Query 422 GGATATTTGACTCCGA-ATATATCAGAGAAAAGTGCGGAAGACGTAACAACGTGATGGAC 480
||||||| ||| || | || |||||||||||||||||| ||||| ||||||||||||||
Sbjct 460 GGATATTCGACACC-AGTTACATCAGAGAAAAGTGCGGAGGACGTGACAACGTGATGGAC 518
Query 481 TTGAAGCAACAATGGTTCTACAGGTTTCTAAAAAAGAC-ATTGGTTCTCCACATCTTTGT 539
|||||||||||||||||||| |||||||| ||| || ||||| ||||||||||||
Sbjct 519 TTGAAGCAACAATGGTTCTATAGGTTTCTTCGAAACACAATTGG-TCTCCACATCTTAAC 577
Query 540 ATTTTGGACCCTCATCTACTTATGGGGTGGTCTACCTTACCTAACTTG-GACCGTGGGT- 597
||||||||||||| |||| ||||||||||||||||||||||||||||| | |||||||
Sbjct 578 ATTTTGGACCCTCGTCTATTTATGGGGTGGTCTACCTTACCTAACTTGCG-GCGTGGGTG 636
Query 598 TCTGGAGGAGCATTCGCTTACCACGGGACTTGGCTCGTAAACTCGGCATGCCATATTTGT 657
| ||||||| || ||| |||| | |||||||||||| ||||||||||||||||||||||
Sbjct 637 T-TGGAGGAACAATCGGTTACAATGGGACTTGGCTCATAAACTCGGCATGCCATATTTGG 695
Query 658 GGTTCGCAAGTGTGGCACACCAATGACACCTCTCGTAACGTTTGGTGGCTAGCGCTATTG 717
||||||| || ||| |||| || ||||||||||||||| |||||||||||| || |||
Sbjct 696 GGTTCGCGAGCATGGAACACTAAGGACACCTCTCGTAACATTTGGTGGCTAGGGCCATTC 755
Query 718 ACTATGGGAGAGAGCTGGCACAACAACCACCATGCCTTTGAGGCGTCGGCTAGGCATGGA 777
|| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||
Sbjct 756 ACGATGGGAGAGAGCTGGCACAACAACCACCATGCCTTTGAGGCCTCGGCCAGGCACGGA 815
Query 778 CTAGAATGGTATCAGTTAGACATAACTTGGTACCTCATTCGGTTCTTTCAGGCTCTCGGC 837
|| |||||||||||| ||||| ||||||||||||||||| | ||||| || ||||||||
Sbjct 816 CTGGAATGGTATCAGGTAGACTTAACTTGGTACCTCATTTGTTTCTTCCAAGCTCTCGGT 875
Query 838 TTAGCCACCAATGTCAAATTGCCTACCGATGATCAGAAA-CGCAAGAT-GGCTATCCCTC 895
|||||||| ||||||||||||||||||||| ||| ||| || || || |||| || |||
Sbjct 876 TTAGCCACGGATGTCAAATTGCCTACCGATGCTCA-AAAGCGAAA-ATTGGCTTTCGCTC 933
Query 896 GTTA 899
||||
Sbjct 934 GTTA 937
> AT1G06360.1 | Symbols: | Fatty acid desaturase family protein
| chr1:1938963-1940459 REVERSE LENGTH=1152
Length=1152
Score = 641 bits (347), Expect = 0.0
Identities = 626/757 (83%), Gaps = 33/757 (4%)
Strand=Plus/Plus
Query 120 AATCGTGCATC-TGTTGTGTCTATTGGCTCCTTTTAACTACAAATGGGAAGCATTGCGGT 178
||| ||||| | | |||||||| ||||| || ||||||||||||||||||||||| ||||
Sbjct 163 AAT-GTGCA-CTTTTTGTGTCTCTTGGCACCATTTAACTACAAATGGGAAGCATTACGGT 220
Query 179 TCGG-TACAATTATC-AC-CATAGTGACAAAC-CTCAGCATTACATTCTCGTACCATAGG 234
|||| | | | || || ||| |||| | |||||||| |||||||| |||||||||
Sbjct 221 TCGGTTTC-GTGCTCTACGCAT--TGAC-TTCACTCAGCATCACATTCTCATACCATAGG 276
Query 235 AACTTGACTCACCGGAGCTTTACA-CTACCTAAATGGCTTGAATATCCATTCGCTTATTC 293
|||||| ||||||||||||||| | || || ||||||||||||||||| || |||||||
Sbjct 277 AACTTGGCTCACCGGAGCTTTA-AGCTTCCGAAATGGCTTGAATATCCTTTAGCTTATTT 335
Query 294 TGCTCTTTTTGCACTTCAGGGTGATCCATTGGATTGGGTGAGCATTCATAGATTCCATCA 353
|||| ||||||| |||||||||||||| ||||||||||||||||| ||||| ||||||||
Sbjct 336 TGCTGTTTTTGCTCTTCAGGGTGATCCGTTGGATTGGGTGAGCATACATAGGTTCCATCA 395
Query 354 CCAGTTCACAGATTCTGACCGTGATCCACATAGCCCTATCGAAGGATTCTGGTTCAGTCA 413
|||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct 396 CCAGTTCACAGATTCTGACCGTGACCCACATAGCCCTATCGAAGGATTTTGGTTCAGTCA 455
Query 414 TGTTTTGTGGATATTTGACTC-CGAATATATCAGAGAAAAGTGCGGAAGACGTAACAACG 472
||| | |||||||| |||| | || ||||||| | | ||||| ||| ||||||||||||
Sbjct 456 TGTGTGGTGGATATGTGACACTCGT-TATATCAAATATAAGTGTGGAGGACGTAACAACG 514
Query 473 TGATGGACTTGAAGCAACAATGGTTCTACAGGTTTCTAAAAAAGACA-TTGGTTCTCCAC 531
|||||||||||||||| ||||||||||| |||||||| || |||| |||||| |||||
Sbjct 515 TGATGGACTTGAAGCAGCAATGGTTCTATTGGTTTCTACGAATGACAATTGGTT-TCCAC 573
Query 532 ATCTTTGTATTTTGGACCCTCATCTA-CT-TATGGGGTGGTCTACCTTACCTAACTTG-G 588
|||| | |||||||| || |||| || ||||| |||| |||||||||| || || |
Sbjct 574 GTCTTAATGTTTTGGACTGTCCTCTATCTCTATGG--TGGTTTACCTTACCTTACATGCG 631
Query 589 ACCGTGG-GTTCTGGAGGAGC-ATTCGCTTACCACGGGACTTGGCTCGTAAACTCGGCAT 646
| | || ||| ||||| | ||| | | |||||| ||| |||||||| ||||||||||
Sbjct 632 GCGGGGGCGTT--GGAGGTGTGATTGGGT-ACCACGTGACATGGCTCGTGAACTCGGCAT 688
Query 647 GCCATATTTGTGGTTCGCA-AGTG-TGGCACACCAATGACACCTCTCGTAACGTTTGGTG 704
|||||||||| |||||| | | | ||| | || || ||||| |||||||||||||||||
Sbjct 689 GCCATATTTGGGGTTCG-AGA-TCATGGAAGACTAAAGACACATCTCGTAACGTTTGGTG 746
Query 705 GCTAGCGCT-ATTGACTATGGGAGAGAGCTGGCACAACAACCACCATGCCTTTGAGGCGT 763
|||| ||| ||| || ||||||||||| |||||||| || ||||| ||||||||| | |
Sbjct 747 GCTAA-GCTTATTTACAATGGGAGAGAGTTGGCACAATAATCACCACGCCTTTGAGTCAT 805
Query 764 CGGCTAGGCATGGACTAGAATGGTATCAGTTAGACATAACTTGGTACCTCATTCGGTTCT 823
|||| ||||| ||| | || |||| ||| |||||||||||||||| || ||||| | |
Sbjct 806 CGGCGAGGCAAGGATTGGAGTGGTGGCAGATAGACATAACTTGGTATCTTATTCGACTAT 865
Query 824 TTCAGGCTCTCGGCTTAGCCACCAATGTCAAATTGCC 860
|| ||| |||||| |||||||| | || ||||||||
Sbjct 866 TTGAGGTTCTCGGGTTAGCCACTGACGTGAAATTGCC 902
> AT1G06350.1 | Symbols: | Fatty acid desaturase family protein
| chr1:1935293-1936819 REVERSE LENGTH=1150
Length=1150
Score = 540 bits (292), Expect = 1e-152
Identities = 727/930 (78%), Gaps = 57/930 (6%)
Strand=Plus/Plus
Query 1 ATGAGTGA-CACCACTAAG-GACGATGGCTCTAGCCAAAACA-AATCAGTGCGTA--AGG 55
||| |||| | ||||| || ||||||||||| |||| || || | | ||| ||| | |
Sbjct 31 ATGTGTGATC-CCACT-AGAGACGATGGCTCCAGCCGAAGCAGAGT-GGTGAGTACTATG 87
Query 56 AAAAAAGAGCGCCTTTTTTAAG-GA-AATGGACC-CAGTTCGATGTTGGGAGAGCTTCGA 112
||||||| || | |||| || || ||||| || | ||||||| | ||||| || |
Sbjct 88 -CAAAAGAGGGCGTATTTTCAGAGACAATGG-CCGTTGGTCGATGTCGTAAGAGCGTC-A 144
Query 113 CT-GTTG-GAATCGTGCATC-TGTTGTGTCTATTGGCTCCTTTTAACTACAAATGGGAAG 169
| |||| | || ||||| | | |||||||| ||||| || ||||||| |||||||||||
Sbjct 145 GTCGTTGTG-ATTGTGCA-CTTTTTGTGTCTCTTGGCGCCGTTTAACTTCAAATGGGAAG 202
Query 170 CATTGCGGTTCGGTACAATTATC-AC-CATAGTGACAAAC-CTCAGCATTACATTCTCGT 226
| || ||||||||| | || | | | |||| || |||||||| |||||||| |
Sbjct 203 CTTTACGGTTCGGTTTGGTGCTCTTCGCGT--TGAC-TACACTCAGCATCACATTCTCAT 259
Query 227 ACCATAGGAACTTGACTCACCGGAGCTT-TACACTACCTAAATGGCTTGAATATCCATT- 284
||||||||||||| ||||||| ||||| | | |||| |||||||| |||||||| ||
Sbjct 260 TCCATAGGAACTTGTCTCACCGTAGCTTCAAGA-TACCAAAATGGCTCGAATATCC-TTG 317
Query 285 CGCTTATTCTGCTCTTTTTGCACTTCAGGGTGATCCATTGGATTGGGTGAGCATTCATAG 344
|||||||||||| |||| || ||||||||||||||| |||||||||||||||| |||||
Sbjct 318 GGCTTATTCTGCTGTTTTCGCTCTTCAGGGTGATCCAATGGATTGGGTGAGCATACATAG 377
Query 345 ATTCCATCACCAGTTCACAGATTCTGACCGTGATCCACATAGCCCTATCGAAGGATTCTG 404
||||||||||||||||||||||| ||||| || ||||||||||||| |||||||| |
Sbjct 378 GTTCCATCACCAGTTCACAGATTCGGACCGCGACCCACATAGCCCTAAAGAAGGATTATT 437
Query 405 GTTCAGTCATGTTTTGTGGATATTTGACTCCGAATATATCAGAGAAAAGTGCGGAAGACG 464
|||||| ||| | ||||||||||||||| || |||| |||| | | ||||| ||| ||||
Sbjct 438 GTTCAGCCATATCTTGTGGATATTTGACACCCAATACATCAAATACAAGTGTGGAGGACG 497
Query 465 TAACAACGTGA-TGGACTTGAAGCAA-CAATGGTTCTACAGGTTTCTAAAAAAGAC-ATT 521
| ||||||| | ||||||||||| || |||||||| || | ||||||| || ||| |||
Sbjct 498 TGACAACGT-ATTGGACTTGAAG-AAGCAATGGTTTTATAAGTTTCTACGAAGGACTATT 555
Query 522 GGTTCTCCACATCTTTGTATTTTGGACCCTCATCTA-CT-TATGGGGTGGTCTACCTTAC 579
| | | |||||||| | ||||||||| || |||| || ||| |||||| ||||||||
Sbjct 556 -GCTGTTCACATCTTAATGTTTTGGACCATCCTCTATCTCTAT--GGTGGTTTACCTTAC 612
Query 580 CTAACTTG-GACCGTGGG-TTCTGG-AGGAGCATTCGCTTACCACGGGACTTGGCTCGTA 636
|| || || | || ||| | ||| | | ||| || |||| ||| |||||||||
Sbjct 613 CTTACATGCG-GCGGGGGCGT-TGGAATTTTTA-TCGGGTATCACGTGACATGGCTCGTA 669
Query 637 AACTCGGCATGCCATATTTGTGGTTCGCAAG-T-GTGGCACACCAATGACACCTCTCGTA 694
|||||||||||||||||||| ||||| ||| | |||| | || || ||||| |||||||
Sbjct 670 AACTCGGCATGCCATATTTGGGGTTC--AAGGTCGTGGAATACTAAAGACACATCTCGTA 727
Query 695 ACGTTTGGTGGCTAGCGCTA-TTGACTATGGGAGAGAGCTGGCACAACAACCACCATGCC 753
||||||||||| || | | || || |||||||| || |||||||||||||| || ||
Sbjct 728 ACGTTTGGTGGTTAA-GTTTGTTTACGATGGGAGAAAGTTGGCACAACAACCATCACGCG 786
Query 754 TTTGAGGCGTCGGCTAGGCATGGACTAGAATGGTATCAGTTAGACATAACTTGGTACCTC 813
|||||| | ||||| ||||| ||| | || |||| ||| ||||||||||||||||||||
Sbjct 787 TTTGAGTCATCGGCGAGGCAAGGATTGGAGTGGTGGCAGATAGACATAACTTGGTACCTC 846
Query 814 ATTCGGTTCTTTCAGGCTCTCGGCT-TAGCCACCAATGTCAAATTGCC-TACCGATGATC 871
||||| | ||| ||| |||||| | ||||||| |||| |||||||| | | || ||
Sbjct 847 ATTCGACTATTTGAGGTTCTCGG-TATAGCCACTGATGTGAAATTGCCCT-CGGAAC-TC 903
Query 872 -AGAAACGCAAGATGGCTATCCCTCGTTAA 900
|||||| ||||||||| || |||||||
Sbjct 904 CAGAAACAAAAGATGGCTCTCGTTCGTTAA 933
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 43954878625
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5