BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg910311
Length=1053
Score E
Sequences producing significant alignments: (Bits) Value
AT1G06250.1 | Symbols: | alpha/beta-Hydrolases superfamily pro... 1718 0.0
AT2G31100.1 | Symbols: | alpha/beta-Hydrolases superfamily pro... 377 9e-104
> AT1G06250.1 | Symbols: | alpha/beta-Hydrolases superfamily protein
| chr1:1913256-1914895 REVERSE LENGTH=1400
Length=1400
Score = 1718 bits (930), Expect = 0.0
Identities = 999/1033 (97%), Gaps = 2/1033 (0%)
Strand=Plus/Plus
Query 1 ATGGTGGAGGGCATACCAAAGAGATGGAAGGTGCTAAGTGGCCAAAACAAATGGCAAGGC 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 46 ATGGTGGAGGGCATACCAAAGAGATGGAAGGTGCTAAGTGGCCAAAACAAATGGAAAGGC 105
Query 61 CTGCTTGATCCACTTGACCCGGATCTTCGCCGCTACATCATTCACTATGGTGAGATGTCT 120
||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct 106 CTGCTTGATCCACTTGACCCGGATCTTCGCCGCTACATCATTCACTACGGCGAGATGTCT 165
Query 121 CAGGTTGGTTATGATGCCTTTAACTGGGACCGTAAGTCCAAATACGCCGGTGATTGTTAT 180
||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 166 CAGGTTGGTTACGATGCCTTTAACTGGGACCGTAAGTCCAGATACGCCGGTGATTGTTAT 225
Query 181 TACTCAAAGAACCAACTGTTTGCTCGAACCGGCTTCCTTAAAGCCAACCCTTTCAGGTAC 240
||||| ||||||| |||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 226 TACTCCAAGAACCGACTGTTAGCTCGAACCGGCTTCCTTAAAGCCAACCCTTTCAGGTAC 285
Query 241 AATGTGACTAAGTACATCTACGCAACAGCTTCCATAAAGTTACCAATCTGTTTCATCGTC 300
|| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 286 AAAGTGACTAAGTACATCTACGCAACAGCTTCCATAAAGTTACCAATCTCTTTCATCGTA 345
Query 301 AAGTCTTTGTCAAAGGATGCATCTCGCGTGCAGACTAACTGGATGGGTTACATTGCAGTT 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 346 AAGTCTTTGTCAAAGGATGCATCTCGCGTGCAGACTAACTGGATGGGTTACATTGCGGTT 405
Query 361 GCTACAGACCAGGGTAAAGCGATGTTAGGAAGGAGAGACATTGTTGTTGCATGGAGAGGA 420
|||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 406 GCTACAGACCAGGGAAAAGCGATGTTAGGGAGGAGAGACATTGTTGTTGCATGGAGAGGA 465
Query 421 ACACTTCAGCCATATGAATGGGCTAATGATTTTGATTTTCCGCTTGAGTCAGCTATCTCG 480
|| || |||||||||||||||||||||||||| ||||||||||||||| |||||||||||
Sbjct 466 ACTCTACAGCCATATGAATGGGCTAATGATTTCGATTTTCCGCTTGAGCCAGCTATCTCG 525
Query 481 GTTTTCCCAGTAACTGACCCCAAAGATAACCCTCGTATTGGAAGTGGCTGGCTCGACATC 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 526 GTTTTCCCAGTAACTGACCCCAAAGATAACCCTCGTATTGGAAGTGGCTGGCTCGACATC 585
Query 541 TATACCGCTTCTGATTCTCGCTCACCTTATGACACGACTAGTGCACAAGAACAGGTACAA 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 586 TATACCGCTTCTGATTCTCGCTCACCTTATGACACGACTAGTGCACAAGAACAGGTACAA 645
Query 601 GGTGAGCTGAAGAGGTTGCTAGAACTTTACAAGAATGAGGAAATAAGCATCACTTTCACA 660
|| ||||| |||||||||||||||||||||||| |||| |||||||||||||| ||||||
Sbjct 646 GGAGAGCTCAAGAGGTTGCTAGAACTTTACAAGGATGAAGAAATAAGCATCACCTTCACA 705
Query 661 GGCCATAGCTTGGGCGCAGTTATGTCAGTTCTATCAGCTGCAGATCTTGTCTATGGCAAA 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 706 GGCCATAGCTTGGGCGCAGTTATGTCAGTTCTATCAGCTGCAGATCTTGTCTATGGCAAA 765
Query 721 AAGAACAAGGTCAATATAAGTCTTCaaaaaaaGCAAGTTCCTATCACAGTTTTTGCTTTC 780
||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 766 AAGAATAATATCAATATAAATCTTCAAAAAAAGCAAGTTCCTATCACAGTTTTTGCTTTC 825
Query 781 GGGAGTCCTCGGATTGGAGACCATAACTTCAAAAACATCGTCGACTCACTCCAACCACTA 840
|||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct 826 GGGAGTCCTCGGATTGGAGACCATAACTTCAAAAACGTAGTCGACTCACTCCAACCACTA 885
Query 841 AACATCCTAAGAATAGTAAATGTTCCAGATGTCGCACCACATTATCCACTCTTACTGTA- 899
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 886 AACATTCTAAGAATAGTAAATGTTCCAGATGTCGCACCACATTATCCACTCTTACTGTAC 945
Query 900 TGCAGAAATTGGCGAGGTGTTAGAGATCAATACTTTGAACTCAACATACCTGAAACGGTC 959
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 946 T-CAGAAATTGGCGAGGTGTTAGAGATCAATACTTTGAACTCAACATACCTGAAACGGTC 1004
Query 960 TCTGAACTTCAGGAACTACCATAACCTGGAGATATACCTGCACGGCATAGCAGGGATGCA 1019
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1005 TCTGAACTTCAGGAACTACCATAACCTGGAGATATACCTGCACGGCATGGCAGGGATGCA 1064
Query 1020 AGATACAGCCGGG 1032
|||||||| ||||
Sbjct 1065 AGATACAGACGGG 1077
> AT2G31100.1 | Symbols: | alpha/beta-Hydrolases superfamily protein
| chr2:13256738-13258176 REVERSE LENGTH=1247
Length=1247
Score = 377 bits (204), Expect = 9e-104
Identities = 740/994 (74%), Gaps = 55/994 (6%)
Strand=Plus/Plus
Query 48 CAAATGGCAAGGCCTGCTTGATCCACTTGACCCGGATCTTCGCCGCTACATCATTCACTA 107
||| ||| ||| |||||||||||| |||||| |||||| ||||| || ||| | |||||
Sbjct 50 CAAGTGGAAAGACCTGCTTGATCCTCTTGACTTGGATCTACGCCGTTATATCCTACACTA 109
Query 108 TGGTGAGATGTCTCAGGTTGGTTATGATGCCTTTAACT-GGGACCGTAAGTCCAAATACG 166
|||||| ||| || |||| || || ||||||||| | | ||||| ||| ||||| |
Sbjct 110 TGGTGATATGGCTGAGGTAGGGTACCTTGCCTTTAA-TAGTGACCGCCGGTCTAAATATG 168
Query 167 CCGGTGATTGTTATTAC-TCAAAGAACCAACTGTTTGCTCGAACCGGCTT-CCTTAAAGC 224
|| ||| | | ||| ||||||| | || |||||||||||||| || ||| |||||
Sbjct 169 TAGGAGATAGCTGCTACACCAAAGAA-GAGCTCTTTGCTCGAACCGG-TTACCTCAAAGC 226
Query 225 CAACCCTTTCAGGTACAATGTGACTAAGTACATCTACGCAACAGCTTCCATAAAGTTACC 284
|||||||||||||||| | ||||| |||||||| || | ||| | || |||| ||||||
Sbjct 227 CAACCCTTTCAGGTACGAGGTGACCAAGTACATATATGGAACTTCGTCTATAAGGTTACC 286
Query 285 A-ATCTGTTTCATCGTCAAGTCTTTGTCAAAGGATGCATCTCGC-GTGCAGACTAACTGG 342
| | |||||||| |||| || ||||||| ||| |||| | | || ||||||||
Sbjct 287 AGA-ATGTTTCATAATCAAATCATTGTCAAGGGAAGCATGGAACAAAG-AGTCTAACTGG 344
Query 343 ATGGGTTACATTGCAGTTGCTACAGACCAGGGTAAAG-CGATGTTAGGAAGGAGAGACAT 401
||||||||||||| || ||||||||| | || ||| | ||||||| ||||| | |||
Sbjct 345 TTGGGTTACATTGCGGTGGCTACAGACGAAGG-CAAGAAGTTGTTAGGGAGGAGGGGCAT 403
Query 402 TGTTGTTGCATGGAGA-GGAACACTTCAGCCATATGAATGGGCTAATGATTTTGATTTTC 460
||||||||||||| || ||| || |||||| || || |||||||| ||||| ||||| |
Sbjct 404 TGTTGTTGCATGGCGAGGGACCA-TTCAGCTGTACGAGTGGGCTAACGATTTCGATTTCC 462
Query 461 CGCTTGAGTCAGCT-ATCTCGGTTTTCCCAGTAACTGACCCCAAAGATAACCCTCGTATT 519
| ||||| |||||| | | ||||||||| | | || |||| || || | ||||| |
Sbjct 463 CACTTGAATCAGCTGTTAT-GGTTTTCCCTGGAGCTAACCCGAATGACGAGCCTCGCGTA 521
Query 520 GGAAGTGGCTGGCTCGACATCTATACCGCTTCTGATTCTCGCTCACCTTATGACACGACT 579
| || ||| ||||| | | ||||| | ||||| | || |||| || ||||| |||
Sbjct 522 GCAAATGGTTGGCTATCCCTTTATACATCCACTGATCCACGATCACGTTTTGACAAGACC 581
Query 580 AGTGCACAAGAACAGGTACAAGGTGAGCTGAAGAGGTTGCTAGAACTT-TACAAGAATGA 638
||||||||||||||||| |||| ||||| || ||||| |||||| || ||||| || ||
Sbjct 582 AGTGCACAAGAACAGGTTCAAGAAGAGCTCAAAAGGTTACTAGAA-TTGTACAAAAACGA 640
Query 639 GGAAATAAGCATCACTTTCACAGGCCATAGCTTGGGCGCAGTTATGTC-AGTTCTATCAG 697
|| | | |||||| || ||||||||||||||||||||||||||||| | ||||||| |
Sbjct 641 AGACGTTACCATCACCTTAACAGGCCATAGCTTGGGCGCAGTTATGTCGA-TTCTATCCG 699
Query 698 CTGCAGATCTTGTCT--ATGGCAAAAAGAAC-AAGGTCA-ATATAAGTCTTCaaaaaaaG 753
| ||||| ||| ||| || | || | | ||| ||| | |||||| ||| | | |
Sbjct 700 CCGCAGA-CTT-TCTCCATAACGAATGGC-CTAAGATCACACC-AAGTCTACAACACA-G 754
Query 754 CA-AGTTCCTATCACAGTTTTTGCTTTCGGGAGTCCTCGGATTGGAGACCATAA-CTTCA 811
| | | | ||||||| ||||||||||||||||| | || || |||| || |||||
Sbjct 755 CCTA-TG--TGTCACAGTATTTGCTTTCGGGAGTCCCCAAATCGGTGACCG-AAGCTTCA 810
Query 812 AAA-ACATCGTCGACTCACTCCAACCAC-TAAACATCCTAAGAATAGTAAATGTTCCAGA 869
||| || |||| || || ||| ||| || | ||||||||||| || ||| || || ||
Sbjct 811 AAAGAC-TCGTAGAGTCTCTCGAAC-ACCTCCACATCCTAAGAGTAACAAACGTCCCGGA 868
Query 870 TGTCGCACCACATTATCCAC-TCTTACTG-TATG-CAGAAATTGGCGAGGTG-TT-AGAG 924
|| || | ||| || | | || | | | | |||| || ||||||| | || | |
Sbjct 869 CCTCATTCCCCGTTACCC-CGTATT-CAGGT-TCACAGATATAGGCGAGGAGCTTCA-A- 923
Query 925 ATCAATACTTTGAACTCA-ACATACCTGAAACGGTCTCTGAACTTCAGGA-ACTACCATA 982
||||| || || || ||| | ||||| ||||| ||||| ||| | ||| | | |||||
Sbjct 924 ATCAACACATTAAAATCAGAG-TACCTAAAACGATCTCTAAACCTG-GGACATTTCCATA 981
Query 983 ACCTGGAGA-TATACCTGCACGGCATAGCAGGGA 1015
|||||||| | ||| | |||||| | |||||||
Sbjct 982 ACCTGGAGGCT-TACTTACACGGCGTGGCAGGGA 1014
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 51640703116
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5