BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg910330
Length=2058
Score E
Sequences producing significant alignments: (Bits) Value
AT1G06430.1 | Symbols: FTSH8 | FTSH protease 8 | chr1:1960058-1... 3386 0.0
AT2G30950.1 | Symbols: VAR2, FTSH2 | FtsH extracellular proteas... 2217 0.0
> AT1G06430.1 | Symbols: FTSH8 | FTSH protease 8 | chr1:1960058-1963011
REVERSE LENGTH=2255
Length=2255
Score = 3386 bits (1833), Expect = 0.0
Identities = 1984/2059 (96%), Gaps = 2/2059 (0%)
Strand=Plus/Plus
Query 1 ATGGCTGCTTCATCAGCTTGTCTTATTGGGAGCGGATTGTCTGTCTACACAACCAAACAG 60
|||||||||||||| ||||||||| | || | ||||| |||||||||||||||||||||
Sbjct 42 ATGGCTGCTTCATCGGCTTGTCTTCTCGGAAATGGATTATCTGTCTACACAACCAAACAG 101
Query 61 AGG-TCTCAAAAGCTTGGGCTTGATAGGGCATCTAAAGCTACAGTTGTGAAGGCTTCTTT 119
||| || ||||||||||||||||||||| ||||||||| |||||||||||||||||||||
Sbjct 102 AGGTTC-CAAAAGCTTGGGCTTGATAGGACATCTAAAGTTACAGTTGTGAAGGCTTCTTT 160
Query 120 GGATGAGAAGAAGCATGAAGGAAGAAGAGGTTTCTTCAAACTCTTACTAGGAAACGCTGC 179
|||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct 161 GGATGAGAAGAAACATGAAGGGAGAAGAGGTTTCTTTAAACTCTTACTAGGAAACGCTGC 220
Query 180 AGCTGGAGTGGGTTTGCTTGCAAGTGGAAACGCAAATGCAGACGAACAAGGACAAGGGGT 239
|||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 221 TGCTGGAGTTGGTTTGCTTGCAAGTGGAAACGCTAATGCAGACGAACAAGGACAAGGGGT 280
Query 240 TTCTTCTTCTAGGATGTCTTATTCTAGGTTTCTAGAGTATTTGGATAAGGGAAGGGTTGA 299
|||||| ||||| ||||||||||||||||| ||||||||||| || ||||||||||||||
Sbjct 281 TTCTTCGTCTAGAATGTCTTATTCTAGGTTCCTAGAGTATTTAGACAAGGGAAGGGTTGA 340
Query 300 GAAAGTAGATTTGTATGAGAATGGGACTATAGCTATTGTTGAGGCTGTTTCTCCTGAGTT 359
||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct 341 GAAAGTAGATTTGTATGAGAATGGGACTATAGCTATTGTGGAGGCCGTTTCTCCTGAGTT 400
Query 360 GGGTAACCGGATTCAGCGTGTACGTGTGCAGCTACCTGGATTGAGTCAGGAGCTTCTCCA 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 401 GGGTAACCGGATTCAGCGTGTACGTGTGCAGCTACCTGGATTGAGTCAGGAGCTTCTCCA 460
Query 420 GAAGTTGAGGGCAAAGAATATTGATTTTGCAGCACATAATGCTCAGGAAGACCAAGGTTC 479
|||||||||||| |||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct 461 GAAGTTGAGGGCTAAGAATATTGATTTCGCAGCACATAATGCTCAGGAGGACCAAGGTTC 520
Query 480 TCCGATACTTAACTTGATTGGGAATCTTGCATTCCCGGTTATTTTGATTGGCGGTTTGTT 539
||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 521 TCCAATACTCAACTTGATTGGGAATCTTGCATTCCCTGTTATTTTGATTGGCGGTTTGTT 580
Query 540 CCTTCTATCGAGAAGGTCCTCTGGTGGAATGGGTGGCCCTGGTGGTCCTGGCTTCCCACT 599
|||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 581 CCTTCTCTCGAGAAGATCCTCTGGTGGAATGGGTGGCCCTGGTGGTCCTGGCTTCCCACT 640
Query 600 CCAAATTGGTCAGTCGAAAGCAAAGTTTCAGATGGAACCAAACACTGGTGTAACTTTTGA 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 641 CCAAATTGGTCAGTCGAAAGCAAAGTTTCAGATGGAACCAAACACTGGTGTAACTTTTGA 700
Query 660 TGATGTTGCTGGAGTCGACGAAGCCAAGCAGGATTTCATGGAAGTGGTGGAGTTTCTGAA 719
|||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct 701 TGATGTTGCTGGAGTCGATGAAGCCAAGCAAGATTTCATGGAAGTGGTGGAGTTTCTGAA 760
Query 720 GAAGCCTGAGAGGTTCACTGCAGTTGGTGCCCGGATCCCCAAAGGTGTTCTCCTTGTTGG 779
||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||
Sbjct 761 GAAGCCTGAGAGGTTCACTGCGGTTGGTGCCCGGATCCCAAAAGGTGTTCTTCTTGTTGG 820
Query 780 TCCTCCTGGTACTGGGAAAACCCTGCTGGCAAAAGCCATTGCTGGTGAAGCCGGTGTGCC 839
|||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||
Sbjct 821 TCCTCCTGGTACCGGGAAAACCCTGTTGGCAAAAGCCATTGCTGGTGAAGCTGGTGTGCC 880
Query 840 CTTCTTTTCCATCTCGGGTTCTGAGTTTGTTGAGATGTTTGTCGGTGTTGGTGCCTCAAG 899
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 881 CTTCTTTTCCATCTCGGGTTCTGAGTTTGTTGAGATGTTTGTCGGTGTTGGTGCATCAAG 940
Query 900 AGTCCGCGATCTTTTCAAAAAAGCCAAAGAAAATGCTCCATGCATTGTTTTCGTGGATGA 959
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 941 GGTCCGCGATCTTTTCAAAAAAGCCAAAGAAAATGCTCCATGCATTGTTTTCGTGGATGA 1000
Query 960 AATAGATGCTGTTGGTAGGCAAAGAGGAACTGGAATTGGTGGAGGTAATGATGAAAGAGA 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1001 AATAGATGCTGTTGGTAGGCAAAGAGGAACTGGAATTGGTGGAGGTAATGATGAAAGAGA 1060
Query 1020 ACAGACCCTTAATCAGCTCCTGACTGAGATGGATGGTTTTGAGGGTAACACTGGTGTTAT 1079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1061 ACAGACCCTTAATCAGCTCCTGACTGAGATGGATGGTTTTGAGGGTAACACTGGTGTTAT 1120
Query 1080 CGTAGTGGCTGCAACCAACAGAGCAGACATTCTTGACTCCGCTTTGCTAAGGCCAGGACG 1139
|||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct 1121 CGTAGTTGCTGCAACCAACAGAGCAGACATTCTTGACTCCGCTTTGCTAAGACCAGGGCG 1180
Query 1140 GTTTGACCGGCAGGTATCTGTTGACGTTCCAGACGTTAAGGGAAGAACAGATATACTCAA 1199
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1181 TTTTGACCGGCAGGTATCTGTTGACGTTCCAGACGTTAAGGGAAGAACAGATATACTCAA 1240
Query 1200 GGTTCACTCCGGGAATAAGAAATTTGAAAGTGGTGTTTCACTTGAAGTAATAGCCATGAG 1259
||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1241 GGTTCACTCGGGGAATAAGAAATTTGAAAGCGGTGTTTCACTTGAAGTAATAGCCATGAG 1300
Query 1260 AACGCCTGGATTTAGCGGAGCTGATCTTGCAAACCTCTTGAACGAGGCTGCCATATTGGC 1319
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1301 AACACCTGGATTTAGCGGAGCTGATCTTGCAAACCTCTTGAACGAGGCTGCCATATTGGC 1360
Query 1320 CGGCCGTCGTGGAAAGACTGCTATATCATCAAAAGAGATCGATGACTCAATTGATAGAAT 1379
|||||| |||||||||||||| ||||||||||||||||| |||||||||||||| |||||
Sbjct 1361 CGGCCGCCGTGGAAAGACTGCAATATCATCAAAAGAGATTGATGACTCAATTGACAGAAT 1420
Query 1380 TGTAGCTGGCATGGAAGGAACAGTCATGACAGATGGGAAGAGCAAAAGCTTGGTTGCTTA 1439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1421 TGTAGCTGGCATGGAAGGAACAGTCATGACAGATGGGAAGAGCAAAAGCTTGGTTGCTTA 1480
Query 1440 CCATGAAGTTGGCCATGCCGTATGTGGAACATTGACTCCAGGACATGATGCTGTCCAAAA 1499
||||||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||
Sbjct 1481 CCATGAAGTTGGCCATGCCATATGTGGAACATTGACTCCAGGGCATGATGCTGTTCAAAA 1540
Query 1500 GGTCACATTGATACCACGAGGCCAGGCAAGAGGTCTGACTTGGTTCATTCCCTCAGATGA 1559
|||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1541 GGTCACGTTGATACCACGAGGCCAGGCTAGAGGTCTGACTTGGTTCATTCCCTCAGATGA 1600
Query 1560 CCCAACTCTAATCTCCAAACAGCAGCTCTTTGCAAGAATTGTTGGTGGACTCGGTGGTAG 1619
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1601 CCCAACTCTAATCTCCAAACAGCAACTCTTTGCAAGAATTGTTGGTGGACTCGGTGGTAG 1660
Query 1620 AGCCGCTGAAGAAGTCATCTTTGGTGAGCCCGAGGTGACTACTGGTGCAGTTAGTGACTT 1679
||| || ||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct 1661 AGCTGCCGAAGAAGTCATCTTTGGTGAGTCTGAGGTGACTACTGGTGCAGTTAGTGACTT 1720
Query 1680 ACAACAGATCACCGGTTTGGCTAAGCAGATGGTGACAACATTTGGGATGTCTGAAATTGG 1739
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1721 GCAACAGATCACCGGTTTGGCTAAGCAGATGGTGACAACATTTGGGATGTCTGAAATCGG 1780
Query 1740 ACCATGGTCGCTAATGGATTCATCGGCTCAAAGCGATGTCATTATGAGGATGATGGCAAG 1799
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1781 ACCATGGTCGCTAATGGATTCATCGGAGCAAAGCGATGTCATTATGAGGATGATGGCAAG 1840
Query 1800 AAACTCAATGTCTGAGAAGCTTGCAAATGATATCGATACAGCGGTGAAGACATTATCAGA 1859
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1841 AAACTCAATGTCTGAGAAGCTTGCAAATGATATTGATACAGCGGTGAAGACATTATCAGA 1900
Query 1860 CAAAGCATACGAGATAGCTTTAAGCCACATTAGAAACAATCGTGAAGCAATGGACAAGAT 1919
|||||| |||||||||||||| ||||| |||||||||||||||||||| |||||||||||
Sbjct 1901 CAAAGCGTACGAGATAGCTTTGAGCCAGATTAGAAACAATCGTGAAGCCATGGACAAGAT 1960
Query 1920 TGTTGAAATACTTCTTGAGAAAGAGACAATGTCAGGCGATGAATTCCGAGCAGTCCTATC 1979
||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||
Sbjct 1961 TGTTGAAATACTTCTTGAGAAAGAGACTATGTCAGGCGATGAATTCCGAGCAATCCTATC 2020
Query 1980 TGAATTCACAGAAATCCCACCTGAAAACCGTGTTGCTTCTTCAACATCCACATCAACACC 2039
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2021 TGAATTCACAGAAATCCCACCTGAAAACCGTGTTGCTTCTTCAACATCCACATCAACACC 2080
Query 2040 GACACCAGCGTCTGTCTGA 2058
||||||||||||||||||
Sbjct 2081 AACACCAGCGTCTGTCTGA 2099
> AT2G30950.1 | Symbols: VAR2, FTSH2 | FtsH extracellular protease
family | chr2:13174321-13177223 FORWARD LENGTH=2337
Length=2337
Score = 2217 bits (1200), Expect = 0.0
Identities = 1719/1966 (87%), Gaps = 50/1966 (3%)
Strand=Plus/Plus
Query 81 TGA-TAGGGCATCTAAAGCTACA-GTTGTGAAGGCTTCTTTGGAT--G-AGAAGAAGCAT 135
||| |||| ||||||| | || | || |||||||||||||||||| | ||||||||||
Sbjct 200 TGATTAGGACATCTAAGGTTA-ATGTAGTGAAGGCTTCTTTGGATGGGAAGAAGAAGCAA 258
Query 136 GAAGGAAGAAGAG-GTTTCTTCAAACTCTTACTAGGAAACGCTGCAGCTGGAGTGGGTTT 194
||||||||||||| |||| ||||| |||| ||||||| | ||||| || |||||
Sbjct 259 GAAGGAAGAAGAGATTTTC-TCAAAATCTTGTTAGGAAA---T---GCTGGGGTCGGTTT 311
Query 195 GCTTGCAAGT-GGAAACGCAAATGCAGACGAACAAGGACAAGGGGTTTCTTCTTCTAGGA 253
| |||||||| ||||| |||||||| || | | |||||| |||||||| || ||||
Sbjct 312 GGTTGCAAGTGGGAAA-GCAAATGCTGATG----A--ACAAGGTGTTTCTTCGTCGAGGA 364
Query 254 TGTCTTATTCTAGGTTTCTAGAGTATTTGGATAAGGGA-AGGGTTG-AGAAAGTAGATTT 311
|||| |||||||||||||||||||| |||||||| ||| |||| || | ||||| |||||
Sbjct 365 TGTCGTATTCTAGGTTTCTAGAGTACTTGGATAA-GGATAGGG-TGAATAAAGTTGATTT 422
Query 312 GTATGAGAATGGGACTATAGCTATTGTTGAGGCTGTTTCTCCTGAGTTGGGTAACCGGAT 371
||||||||||||||||||||||||||| || |||||||||||||| |||||||||||| |
Sbjct 423 GTATGAGAATGGGACTATAGCTATTGTGGAAGCTGTTTCTCCTGAATTGGGTAACCGGGT 482
Query 372 TCAGCGTGTACGTGTGCAGCTACCTGGATTGAGTCAGGAGCTTCTCCAGAAG-TTGAGGG 430
| || | |||||||| |||||||| || || ||||| |||||||| |||||| || ||||
Sbjct 483 TGAGAGAGTACGTGTTCAGCTACCGGGTTTAAGTCAAGAGCTTCTACAGAAGCTT-AGGG 541
Query 431 CAAAGAATATTGATTTTGCAGCACATAATGCTCAGGAAGACCAAGGTTCTCCGATACTT- 489
| |||||||||||||||||||||||||||||||||||||| ||||||||| | || ||
Sbjct 542 CTAAGAATATTGATTTTGCAGCACATAATGCTCAGGAAGATCAAGGTTCTGTGTTA-TTC 600
Query 490 AACTTGATTGGGAATCTTGCATTCCCGGTTATTTTGATTGGCGGTTTGTTCCTTCTATCG 549
||||||||||| |||||||| ||||||| |||||||||| |||||||||||||| |||
Sbjct 601 AACTTGATTGGTAATCTTGCTTTCCCGGCGCTTTTGATTGGTGGTTTGTTCCTTCTTTCG 660
Query 550 AGAAGGTCCT-CTGGTGGAATGGGTGGCCCTGGTGGTCCTGGCT-TCCCACTCCAAATTG 607
||| ||| || ||||||||||||||| |||||||||||||| | |||||| || |||
Sbjct 661 AGACGGT-CTGGTGGTGGAATGGGTGGACCTGGTGGTCCTGG-TAACCCACTTCAGTTTG 718
Query 608 GTCAGTCGAAAGCAAAGTTTCAGATGGAACCAAACACTGGTGTAACTTTTGATGATGTTG 667
||||||| ||||||||||| || |||||||| |||||||||||||| |||||||||||||
Sbjct 719 GTCAGTCCAAAGCAAAGTTCCAAATGGAACCTAACACTGGTGTAACATTTGATGATGTTG 778
Query 668 CTGGAGTCGACGAAGCCAAGCAGGATTTCATGGAAGTGGTGGAGTTTCTGAAGAAGCCTG 727
||||||| || ||||| ||||| |||||||||||||||||||||||| ||||||| ||||
Sbjct 779 CTGGAGTTGATGAAGCAAAGCAAGATTTCATGGAAGTGGTGGAGTTTTTGAAGAAACCTG 838
Query 728 AGAGGTTCACTGCAGTTGGTGCCCGGATCCCCAAAGGTGTTCTCCTTGTTGGTCCTCCTG 787
|||| |||||||| ||||||||| |||||| ||||||||||| ||| ||||||||||||
Sbjct 839 AGAGATTCACTGCGGTTGGTGCCAAGATCCCGAAAGGTGTTCTTCTTATTGGTCCTCCTG 898
Query 788 GTACTGGGAAAACCCTGCTGGCAAAAGCCATTGCTGGTGAAGCCGGTGTGCCCTTCTTTT 847
|||| ||||||||||| ||||||||||||||||||||||||| |||||||| ||||| |
Sbjct 899 GTACCGGGAAAACCCTTTTGGCAAAAGCCATTGCTGGTGAAGCTGGTGTGCCTTTCTTCT 958
Query 848 CCATCTCGGGTTCTGAGTTTGTTGAGATGTTTGTCGGTGTTGGTGCCTCAAGAGTCCGCG 907
||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct 959 CCATCTCTGGTTCTGAGTTTGTTGAGATGTTTGTCGGTGTTGGTGCCTCGAGAGTCCGTG 1018
Query 908 ATCTTTTCAAAAAAGCCAAAGAAAATGCTCCATGCATTGT-TTTCGTGGATGAAATAGAT 966
|||||||||| |||||||| || || ||||| |||||||| ||| || ||||||||||||
Sbjct 1019 ATCTTTTCAAGAAAGCCAAGGAGAACGCTCCTTGCATTGTCTTT-GTAGATGAAATAGAT 1077
Query 967 GCTGTTGGTAGGCAAAGAGGAACTGGAATTGGTGGAGGTAATGATGAAAGAGAACAGACC 1026
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1078 GCTGTTGGTAGGCAAAGAGGAACCGGAATTGGTGGAGGTAATGATGAAAGAGAACAGACC 1137
Query 1027 CTTAATCAGCTCCTGACTGAGATGGATGGTTTTGAGGGTAACACTGGTGTTATCGTAGTG 1086
|| ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1138 CTCAATCAGCTCCTAACTGAGATGGATGGTTTTGAAGGTAACACTGGTGTTATCGTAGTT 1197
Query 1087 GCTGCAACCAACAGAGCAGACATTCTTGACTCCGCTTTGCTAAGGCCAGGACGGTTTGAC 1146
||||||||||| |||||||||||||||||||| |||||| | ||||||||||||||||||
Sbjct 1198 GCTGCAACCAATAGAGCAGACATTCTTGACTCTGCTTTGTTGAGGCCAGGACGGTTTGAC 1257
Query 1147 CGGCAGGTATCTGTTGACGTTCCAGACGTTAAGGGAAGAACAGATATACTCAAGGTTCAC 1206
||||||||| |||||||||||| ||||||||||| ||||||||||| |||||||||||
Sbjct 1258 CGGCAGGTAAGTGTTGACGTTCCTGACGTTAAGGGGAGAACAGATATTCTCAAGGTTCA- 1316
Query 1207 T-CCGGGAATAAGAAATTTGA-AAGTGGTGTTTCACTTGAAGTAATAGCCATGAGAACGC 1264
| |||| |||||||| || || || || ||||||||||||| ||||||| |||||||| |
Sbjct 1317 TGCCGGCAATAAGAAGTTCGACAA-TGATGTTTCACTTGAAATAATAGCAATGAGAACAC 1375
Query 1265 CTGGATTTAGCGGAGCTGATCTTGCAAACCTCTTGAACGAGGCTGCCATATTGGCCGGCC 1324
|||||||||||||||| ||||| || ||||||||||| |||||||| |||||||||||
Sbjct 1376 CTGGATTTAGCGGAGCAGATCTCGCTAACCTCTTGAATGAGGCTGCTATATTGGCCGGAA 1435
Query 1325 GTCGTGGAAAGAC-TGCTATATCATCAAAAGAGATCGATGACTCAATTGATAGAATTGTA 1383
| || | | ||| | | |||||||| |||||||| |||||||| ||||||||||| ||
Sbjct 1436 GGCGAGCACGGACAT-CGATATCATCTAAAGAGATTGATGACTCCATTGATAGAATCGTT 1494
Query 1384 GCTGGCATGGAAGGAACAGTCATGACAGATGGGAAGAGCAAAAGCTTGGTTGCTTACCAT 1443
|||||||||||||||||||| ||||| ||||| ||||||||||||||||| |||||||||
Sbjct 1495 GCTGGCATGGAAGGAACAGTGATGACCGATGGCAAGAGCAAAAGCTTGGTAGCTTACCAT 1554
Query 1444 GAAGTTGGCCATGCCGTATGTGGAACATTGACTCCAGGACATGATGCTGTCCAAAAGGTC 1503
|||||||| ||||| || |||||||||||||||||||||||||||||||| ||||||||
Sbjct 1555 GAAGTTGGTCATGCAGTGTGTGGAACATTGACTCCAGGACATGATGCTGTGCAAAAGGTA 1614
Query 1504 ACATTGATACCACGAGGCCAGGCAAGAGGTCTGACTTGGTTCATTCCCTCAGATGACCCA 1563
|| ||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct 1615 ACGTTGATACCAAGAGGCCAAGCAAGAGGTCTGACTTGGTTCATTCCATCAGATGACCCG 1674
Query 1564 ACTCTAATCTCCAAACAGCAGCTCTTTGCAAGAATTGTTGGTGGACTCGGTGGTAGAGCC 1623
|| || |||||||| ||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct 1675 ACACTCATCTCCAAGCAGCAACTCTTTGCAAGAATTGTTGGTGGACTCGGTGGTAGGGCC 1734
Query 1624 GCTGAAGAAGTCATCTTTGGTGAGCCCGAGGTGACTACTGGTGCAGTTAGTGACTTACAA 1683
||||||||| ||||||||||||| |||||||||||||||| |||||| |||||||||||
Sbjct 1735 GCTGAAGAAATCATCTTTGGTGATTCCGAGGTGACTACTGGCGCAGTTGGTGACTTACAA 1794
Query 1684 CAGATCACCGGTTTGGCTA-AGCAGATGGTGACAACATTTGGGATGTCTGAAATTGGACC 1742
||||||||||||||||||| | |||||||| ||||||||||| |||||||| ||||||||
Sbjct 1795 CAGATCACCGGTTTGGCTAGA-CAGATGGTAACAACATTTGGAATGTCTGATATTGGACC 1853
Query 1743 ATGGTCGCTAATGGATTCATCGGCTCAAAGCGATGTCATTATGAGGATGATGGCAAGAAA 1802
|||||| | |||||||| ||||| |||||||||||||| ||||| ||||||||||||||
Sbjct 1854 ATGGTCTTTGATGGATTCTTCGGCACAAAGCGATGTCATCATGAGAATGATGGCAAGAAA 1913
Query 1803 CTCAATGTCTGAGAAGCTTGCA-AATGATATCGATACAGCGGTGAAGACATTATCAGACA 1861
||| |||||||||||||||||| || || || ||| | |||||||||| | |||||||||
Sbjct 1914 CTCCATGTCTGAGAAGCTTGCAGAA-GACATTGATTCTGCGGTGAAGAAACTATCAGACA 1972
Query 1862 AAGCATACGAGATAGCTTTAAGCCACATTA-GAAACAATCGTGAAGCAATGGACAAGATT 1920
||||| ||||||||| |||||||||| | ||| |||||||||||| ||||| ||| |
Sbjct 1973 GTGCATATGAGATAGCTCTAAGCCACATAAAGAA-CAATCGTGAAGCCATGGATAAGCTC 2031
Query 1921 GTTGAAATACTTCTTGAGAAAGAGACAAT-GTCAGGCGATGAATTCCGAGCAGTCCTATC 1979
|||||| | ||||| |||||||| || || | | || || |||||| | ||| | || ||
Sbjct 2032 GTTGAAGTGCTTCTCGAGAAAGAAACTATTGGC-GGTGACGAATTCAGGGCAATTCTTTC 2090
Query 1980 TGAATTCACAGAAATCCCACCTGAAAACCGTGTTGCTTCTTCAACA 2025
|| || || || ||||| || |||||||| ||| |||||||||||
Sbjct 2091 CGAGTTTACTGAGATCCCCCCGGAAAACCGAGTTCCTTCTTCAACA 2136
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 102007507440
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5