BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg910443
Length=4482
Score E
Sequences producing significant alignments: (Bits) Value
AT1G07530.1 | Symbols: SCL14, ATGRAS2, GRAS2 | SCARECROW-like 1... 3415 0.0
AT1G07520.1 | Symbols: | GRAS family transcription factor | ch... 2970 0.0
AT2G29060.1 | Symbols: | GRAS family transcription factor | ch... 241 6e-62
> AT1G07530.1 | Symbols: SCL14, ATGRAS2, GRAS2 | SCARECROW-like
14 | chr1:2313582-2316469 REVERSE LENGTH=2787
Length=2787
Score = 3415 bits (1849), Expect = 0.0
Identities = 2121/2248 (94%), Gaps = 35/2248 (2%)
Strand=Plus/Plus
Query 18 TGGATCCATGGACGAGTTCGATTTCAATAAGGACTTTGATTTGCCT--C-CCTCAAACCA 74
|||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||
Sbjct 258 TGGATCCATGGACGAGTTGGATTTCAATAAGGACTTTGATTTGCCTCCCTCCTCAAACCA 317
Query 75 AACCTTAGGTTTAGCTAATGGATTCTATCTAGATGACTTAGATTTCACTTCCTTGGATCC 134
||||||||||||||||||||| |||||| ||||||||||||||||| | |||||||||||
Sbjct 318 AACCTTAGGTTTAGCTAATGGGTTCTATTTAGATGACTTAGATTTCTCATCCTTGGATCC 377
Query 135 TCCAGAGGCATATCCCTCCCAG---------AACTAC-A-A-CAACAACAAAGCTGCATC 182
|||||||||||||||||||||| ||| || | | |||||||||||||| | |
Sbjct 378 TCCAGAGGCATATCCCTCCCAGAACAACAACAACAACAACATCAACAACAAAGCTGTAGC 437
Query 183 AGGAGATCTGTTATCATCTCCATCTGATGACGCTGATTTCTCTGATTCGGTTTTGAAGTA 242
||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||
Sbjct 438 AGGAGATCTGTTATCATCTTCATCTGATGACGCTGATTTCTCTGATTCTGTTTTGAAGTA 497
Query 243 CATAAGCCAAGTTCTTATGGAAGAGGACATGGAAGAGAAGCCTTGTATGTTTCATGACGC 302
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 498 TATAAGCCAAGTTCTTATGGAAGAGGATATGGAAGAGAAGCCTTGTATGTTTCATGACGC 557
Query 303 CTTGGCTCTTCAAGCTGCTGAGAAATCTCTCTACGAGGCTCTCGGTGAGAAATACCCTTC 362
|||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct 558 TTTGGCTCTTCAAGCTGCTGAGAAATCTCTCTATGAGGCTCTTGGTGAGAAATACCCTTC 617
Query 363 TTCTTCTTCTG-GT-TT-TGTGGACCATCCTGAGAGATTGGCTTCTGATAGCCCTGACGG 419
||| ||||||| | || |||||| |||||||||||||||||| |||||||||||||||
Sbjct 618 TTCGTCTTCTGCTTCTTCTGTGGATCATCCTGAGAGATTGGCTAGTGATAGCCCTGACGG 677
Query 420 TTCTTGTTCCGGTGGTGCTTTTAGTGATTACGCTAGCACCACTACCACTACTTCTTCTGA 479
||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 678 TTCTTGTTCAGGTGGTGCTTTTAGTGATTACGCTAGCACCACTACCACTACTTCCTCTGA 737
Query 480 TTCACACTGGAGTGTTGATGGTTTGGAGAATAGACCTTCCTGGTTACATACACCTATGCC 539
||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 738 TTCTCACTGGAGTGTTGATGGTTTGGAGAATAGACCTTCTTGGTTACATACACCTATGCC 797
Query 540 GAGTAATTTTGTTTTCCAGTCCACTTCTAGGTCCAACAGTGTCACC------GGTGGTGG 593
||||||||||||||||||||| |||||||||||||||||||||||| ||||||||
Sbjct 798 GAGTAATTTTGTTTTCCAGTCTACTTCTAGGTCCAACAGTGTCACCGGTGGTGGTGGTGG 857
Query 594 TGGTAATACTGCGGTTTACGGGTCTGGTTTCGGCGATGATTTGGTTTCGAATATGTTTAA 653
|||||||| |||||||||||| || ||||| |||||||||||||||||||||||||||||
Sbjct 858 TGGTAATAGTGCGGTTTACGGTTCAGGTTTTGGCGATGATTTGGTTTCGAATATGTTTAA 917
Query 654 TGATAG-TGAATTGGCTATGCAGTTCAAGAGAGGGGTAGAGGAAGCGAGTAAGTTCCTTC 712
||| | ||||||||||||||||||||||| |||||| |||||||| |||||||||||||
Sbjct 918 AGAT-GATGAATTGGCTATGCAGTTCAAGAAAGGGGTTGAGGAAGCTAGTAAGTTCCTTC 976
Query 713 CTAAATCTTCTCAGCTCTTTATTGATGTGGATAGTTACATCCCTAAGAATTCGGGTTCCA 772
|||| |||||||||||||||||||||||||||||||||||||||| |||||| |||||||
Sbjct 977 CTAAGTCTTCTCAGCTCTTTATTGATGTGGATAGTTACATCCCTATGAATTCTGGTTCCA 1036
Query 773 AGGAAAATGGTTCTGAGGTTTTTGTTAAGACGGAGAAGAAAGATGAGACAGAG------C 826
||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1037 AGGAAAATGGTTCTGAGGTTTTTGTTAAGACGGAGAAGAAAGATGAGACAGAGCATCATC 1096
Query 827 ATCATCATAGCTCTGCTCCTCCTCCCAACAGATTGACTGGGAAGAAAAGCCATTGGCGCG 886
|||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct 1097 ATCATCATAGCTATGCTCCTCCTCCCAACAGATTAACTGGTAAGAAAAGCCATTGGCGCG 1156
Query 887 AAGAAGATGAAGATTTCGTCGAAGAAAGAAGTAACAAGCAATCAGCTGTTTATGTTGAGG 946
| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1157 ACGAAGATGAAGATTTCGTTGAAGAAAGAAGTAACAAGCAATCAGCTGTTTATGTTGAGG 1216
Query 947 AAAGCGAGCTTTCTGAAATGTTTGATAAGATCTTGGTATGTGGCCCTGGGAAACCCGTAT 1006
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1217 AAAGCGAGCTTTCTGAAATGTTTGATAAGATCTTGGTATGTGGCCCTGGGAAACCTGTAT 1276
Query 1007 GCATTCTTAACCAGAAGTTTCCAACAGAACCCGCCGAAGTCGAGACCGCACAGTCAAATG 1066
|||||||||||||||| ||||| |||||| |||| |||||| |||||||||||||||||
Sbjct 1277 GCATTCTTAACCAGAACTTTCCTACAGAATCCGCTAAAGTCGTGACCGCACAGTCAAATG 1336
Query 1067 GAGCAAAGATTCGTGGGAAGAAATCAACTACTAGTAATCATAGTAATGACTCTAAGAAAG 1126
||||||||||||||||||||||||||||| ||| || ||||||||| || ||||||||||
Sbjct 1337 GAGCAAAGATTCGTGGGAAGAAATCAACTTCTACTAGTCATAGTAACGATTCTAAGAAAG 1396
Query 1127 AAACTGCTGATTTGAGGACTCTTCTGGTGTTATGTGCACAAGCTGTATCAGTGGATGATC 1186
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1397 AAACTGCTGATTTGAGGACTCTTTTGGTGTTATGTGCACAAGCTGTATCAGTGGATGATC 1456
Query 1187 GTAGAACTGCCAATGAAATGCTGAGACAGATACGGGAGCATTCTTCGCCTCTAGGCAATG 1246
||||||| ||||| |||||||| || |||||||| |||||||||||||||||||||||||
Sbjct 1457 GTAGAACCGCCAACGAAATGCTAAGGCAGATACGAGAGCATTCTTCGCCTCTAGGCAATG 1516
Query 1247 GGTCAGAGCGATTGGCTCATTATTTTGCAAATAGTCTTGAAGCACGCTTAGCTGGGACTG 1306
| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1517 GTTCAGAGCGGTTGGCTCATTATTTTGCAAATAGTCTTGAAGCACGCTTAGCTGGGACCG 1576
Query 1307 GTACACAGATCTACACCGCTTTATCTTCGAAGAAAACATCTGCAGCAGACATGTTGAAGG 1366
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1577 GTACACAGATCTACACCGCTTTATCTTCGAAGAAAACGTCTGCAGCAGACATGTTGAAGG 1636
Query 1367 CTTACCAGACATACATGTCGGTCTGTCCGTTCAAGAAAGCTGCTATCATATTTGCTAACC 1426
||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct 1637 CTTACCAGACATACATGTCGGTCTGCCCTTTCAAGAAAGCTGCTATCATATTTGCTAACC 1696
Query 1427 ACAACATGATGCGTTTCACTGCAAACGCCAACACGATCCACATAATAGATTTCGGGATAT 1486
||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1697 ACAGCATGATGCGTTTCACTGCAAACGCCAACACGATCCACATAATAGATTTCGGAATAT 1756
Query 1487 CTTACGGTTTTCAGTGGCCTGCTCTGATTCATCGCCTCTCGCT---CAGACCTGGTGGGT 1543
||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
Sbjct 1757 CTTACGGTTTTCAGTGGCCTGCTCTGATTCATCGCCTCTCGCTCAGCAGACCTGGTGGTT 1816
Query 1544 CGCCTAAGCTTCGCATTACTGGCATAGAGCTTCCTCAGCGTGGTTTTAGACCAGCGGAAG 1603
||||||||||||| ||||| || ||||||||||||||||| |||||||||||||||||||
Sbjct 1817 CGCCTAAGCTTCGAATTACCGGTATAGAGCTTCCTCAGCGCGGTTTTAGACCAGCGGAAG 1876
Query 1604 GAGTTCAGGAGACGGGTCATCGTTTGGCTCGATACTGTCAGCGACACAATGTTCCGTTTG 1663
||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1877 GAGTTCAGGAGACAGGTCATCGCTTGGCTCGATACTGTCAGCGACACAATGTTCCGTTTG 1936
Query 1664 AGTACAACGCAATTGCTCAGAAATGGGAAACGATCAAAGTCGAAGATTTAAAGCTTCGAC 1723
||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||
Sbjct 1937 AGTACAACGCAATTGCTCAGAAATGGGAAACGATCCAAGTCGAAGACTTAAAGCTTCGAC 1996
Query 1724 AAGGAGAGTATGTGGTTGTAAACTCTTTGTTCCGTTTTAGGAACCTTCTAGATGAGACCG 1783
||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct 1997 AAGGAGAGTATGTGGTTGTGAACTCTTTGTTCCGTTTCAGGAACCTTCTAGATGAGACCG 2056
Query 1784 TTCTGGTAAACAGCCCGAGAGATGCGGTTTTGAAACTGATAAGAAAAGTAAACCCGAATG 1843
||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||
Sbjct 2057 TTCTGGTAAACAGCCCGAGAGATGCAGTTTTGAAGCTGATAAGAAAAATAAACCCGAATG 2116
Query 1844 TCTTCATCCCTGCGATCCTAAGCGGGAATTACAACGCGCCATTTTTTGTCACGAGGTTCA 1903
||||||| || |||||| ||||||||||||||||||||||||| ||||||||||||||||
Sbjct 2117 TCTTCATTCCAGCGATCTTAAGCGGGAATTACAACGCGCCATTCTTTGTCACGAGGTTCA 2176
Query 1904 GAGAAGCGTTGTTTCATTACTCGGCTGTGTTTGATTTGTGTGACTCGAAGCTAGCAAGGG 1963
||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct 2177 GAGAAGCGTTGTTTCATTACTCGGCTGTGTTTGATATGTGTGACTCGAAGCTAGCTAGGG 2236
Query 1964 AAGACGAGATGAGGCTGATGTATGAGAAAGAGTTTTATGGGAGAGAGATTATTAATGTTG 2023
|||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct 2237 AAGACGAGATGAGGCTGATGTATGAGAAAGAGTTTTATGGGAGAGAGATTGTGAATGTTG 2296
Query 2024 TGGCTTGTGAAGGAACGGAGAGAGTGGAGAGACCAGAGACATATAAGCAGTGGCAGGCGA 2083
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 2297 TGGCTTGTGAAGGAACAGAGAGAGTGGAGAGACCAGAGACATATAAGCAGTGGCAGGCGA 2356
Query 2084 GACTGATCCGAGCCGGATTTAGACAGCTTCCGCTTGAGAAGGAACTGATGCAGAATCTGA 2143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2357 GACTGATCCGAGCCGGATTTAGACAGCTTCCGCTTGAGAAGGAACTGATGCAGAATCTGA 2416
Query 2144 AGTTGAAAATCAAAAACGGGTACGATAAAAACTTCGATGTTGATCAAAACGGTAACTGGT 2203
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2417 AGTTGAAAATCGAAAACGGGTACGATAAAAACTTCGATGTTGATCAAAACGGTAACTGGT 2476
Query 2204 TGCTTCAAGGGTGGAAAGGTAGAATCGT 2231
| ||||||||||||||||||||||||||
Sbjct 2477 TACTTCAAGGGTGGAAAGGTAGAATCGT 2504
> AT1G07520.1 | Symbols: | GRAS family transcription factor |
chr1:2309564-2311805 REVERSE LENGTH=2242
Length=2242
Score = 2970 bits (1608), Expect = 0.0
Identities = 1969/2134 (92%), Gaps = 62/2134 (3%)
Strand=Plus/Plus
Query 2365 ATGGAATCGAATTACTCAGGTTTGGTCAACGGTTTAGAGTATTACGATGTGAGCTTCTTA 2424
||||||||||||||||||||| |||||||| | | ||||||||||| ||||||
Sbjct 1 ATGGAATCGAATTACTCAGGTGTGGTCAAC------G-G--CTACGATGTGAGTTTCTTA 51
Query 2425 CCAAATTCGATTCCTGATCTTGGATTCGGTGTTCCTTCGTCTAGTGATTTTGATCTCCGC 2484
|||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct 52 CCAACTTCGATTCCGGATCTTGGATTCGGTGTTCCTTCTTCTAGTGATTTTGATCTTCGG 111
Query 2485 ATGG----AT-C-AT---CAACCGTCAATTTGGGTTCCAGATCAAGACCATCACTTTTCT 2535
|||| || | || ||||| || |||||||||||||||||||| ||||||||||||
Sbjct 112 ATGGATCAATACTATCACCAACCTTCGATTTGGGTTCCAGATCAAGATCATCACTTTTCT 171
Query 2536 CCTCCAGCTGATGAGATTGATTCTGAAAACACACTTTTGAAATATGTAAACCTTCTCCTT 2595
|| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||
Sbjct 172 CCACCAGCTGATGAGATTGATTCTGAAAACACCCTTTTGAAATATGTAAACCAGCTCCTT 231
Query 2596 ATGGAAGAGAGTCTCGCGGAGAAGCAATCTATGTTCTACGATTCCTTGGCTCTTCGACAA 2655
||||||||||||||||| |||||||| ||||| ||||| |||||||||||||||||||||
Sbjct 232 ATGGAAGAGAGTCTCGCTGAGAAGCAGTCTATCTTCTATGATTCCTTGGCTCTTCGACAA 291
Query 2656 ACCGAAGAAATGTTGCAGCAAGTCATCAGCGACTCGCAAACTCACTCTTTTATTCCTAAT 2715
||||| |||||||||||||||||||||||||||||||| ||||| |||| ||| ||||||
Sbjct 292 ACCGAGGAAATGTTGCAGCAAGTCATCAGCGACTCGCAGACTCAGTCTTCTATACCTAAT 351
Query 2716 AATTCGATTTCTACTACTAGTACTAGTAGTAATAGTGGCGATTATTATAGGAGCAGTAGT 2775
||||||| | |||||| |||| ||||||||||||| | | | | | | | ||||
Sbjct 352 AATTCGA--T-TACTACCAGTAGTAGTAGTAATAGT-G-G-TGA-T-T------A-TAGT 396
Query 2776 AACAGCAGCAATTCTAGTGTACGCGTCGAAACAGCTGCTAATTCTGCTGAGAATGAAGTG 2835
|||||||||||||||| || || | | || | | | ||||||||||||
Sbjct 397 AACAGCAGCAATTCTA--GT----GT------A-C-GC--A---T-C-GAGAATGAAGTG 435
Query 2836 TTG-TTGTATGATAATCATCTTGGTGATTCTGGTGTTGTGTCGTTTCCAGGGTTTAACAT 2894
||| ||| || |||| |||||||||||||||||||||||||| |||||||||| ||||||
Sbjct 436 TTGTTTG-ATAATAAACATCTTGGTGATTCTGGTGTTGTGTCATTTCCAGGGTCTAACAT 494
Query 2895 GTTGCGTGGAGGCGAGCAATTCCGACAGCCGGCGAATGAGATTCTTGTCAGGAGTATGTT 2954
|||||||||||| ||||||||| | ||||| |||||||||||||||||||||||||||||
Sbjct 495 GTTGCGTGGAGGTGAGCAATTCGGGCAGCCAGCGAATGAGATTCTTGTCAGGAGTATGTT 554
Query 2955 TAGTGATGCAGAATCAGTTATGCAGTTTAAGAGAGGGCTAGAGGAAGCTAGCAAGTTTCT 3014
||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct 555 TAGTGATGCAGAATCAGTTCTGCAGTTTAAGAGAGGGTTAGAGGAAGCTAGCAAGTTTCT 614
Query 3015 TCCTAATACTGATCAATGGATCTTCAATCTTGAGCCTGAGATGGAGAGAGTTGTTCCGGT 3074
|||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct 615 TCCTAATACTGATCAATGGATCTTTAATCTTGAGCCTGAGATGGAAAGAGTTGTTCCGGT 674
Query 3075 GAAACAAGAGAAAGGATGGTCTGGTATCTCGAGAACTAGGAAGAATCATCACGAAC-GG- 3132
|||| |||| |||||||||| | |||||||| ||||||||||||||||||||| | ||
Sbjct 675 GAAAGTAGAGGAAGGATGGTCAGCTATCTCGAAAACTAGGAAGAATCATCACGAGCGGGA 734
Query 3133 -GAAGAAGAAGATGATCTAGAGGAAGCT---AGGAGTAGTAAGCAATTTGCAGTGGATGA 3188
||||||||||||||||||||||||||| ||||| ||||||||||| |||||| ||||
Sbjct 735 AGAAGAAGAAGATGATCTAGAGGAAGCTAGGAGGAGGAGTAAGCAATTCGCAGTGAATGA 794
Query 3189 GGAAGATGGGAAATTGACAGAAATGTTTGATAAGGTTTTGCTTCTTGATGGTGAATATGA 3248
||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||
Sbjct 795 GGAAGATGGGAAATTAACAGAAATGTTTGATAAGGTTTTGCTTCTTGATGGTGAATGCGA 854
Query 3249 TCCGCTGATTATCGAAGATGGCGAGAATGGTTCAAGCAAGGCTCAGGTTAAGAAAGGCCG 3308
||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||||
Sbjct 855 TCCGCAGATTATCGAAGATGGCGAAAATGGTTCAAGCAAGGCTCTGGTTAAGAAAGGCCG 914
Query 3309 GGGGAAAAAGAAAAGTCGAGCGGTTGATTTCCGCACACTTCTCACTCTATGCGCACAATC 3368
| ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 915 CGCGAAAAAGAAGAGTCGAGCGGTTGATTTCCGCACACTTCTCACACTATGCGCACAATC 974
Query 3369 TGTTTCTGCAGGGGATAAGATTACGGCTGATGATTTGCTGAGGCAGATAAGGAAGCAATG 3428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 975 TGTTTCTGCAGGGGATAAGATTACGGCTGATGATTTGCTGAGGCAGATAAGGAAGCAATG 1034
Query 3429 TTCACCGGTTGGTGATGCATCACAGAGACTAGCTCATTTCTTCGCCAATGCACTTGAGGC 3488
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1035 TTCACCTGTTGGTGATGCATCACAGAGACTAGCTCATTTCTTCGCCAATGCACTTGAGGC 1094
Query 3489 GCGTCTTGAAGGTAGCACGGGAACTGTGATCCAGAGTTACTACGATTCCATTTCCTCCAA 3548
|||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||
Sbjct 1095 GCGTCTTGAAGGTAGCACAGGAACTATGATCCAGAGTTATTACGATTCCATTTCCTCCAA 1154
Query 3549 GAAACGAACAGCTGCACAGATTCTTAAATCCTATAGTGTGTTCTTGTCTGCGTCTCCGTT 3608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1155 GAAACGAACAGCTGCACAGATTCTTAAATCCTATAGTGTGTTCTTGTCTGCGTCTCCGTT 1214
Query 3609 TATGACTTTGATCTATTTCTTCTCCAACAAGATGATTTTTGATGCTGCCAAGGGTGCTTC 3668
||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||
Sbjct 1215 TATGACTTTGATCTATTTCTTCTCCAACAAGATGATTCTTGATGCTGCCAAGGATGCTTC 1274
Query 3669 GGTTCTTCATATAATTGATTTCGGGATCCTTTACGGTTTCCAGTGGCCGATGTTTATACA 3728
||||||||||||| | ||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct 1275 GGTTCTTCATATAGTCGATTTTGGGATCCTTTATGGTTTCCAGTGGCCGATGTTTATACA 1334
Query 3729 GCACTTATCAAAGACCAACACCGGACTACGGAAACTACGGATTACCGGCATCGAGATTCC 3788
|||||||||||||| |||| |||||||||||||||||||||||||||| |||||||||||
Sbjct 1335 GCACTTATCAAAGAGCAACCCCGGACTACGGAAACTACGGATTACCGGTATCGAGATTCC 1394
Query 3789 TCAACACGGGCTTCGTCCAACCGAAAGAATACAGGATACAGGTCGAAGACTGACAGAGTA 3848
|||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1395 TCAACATGGGCTTCGTCCAACTGAAAGAATACAGGATACAGGTCGAAGACTGACAGAGTA 1454
Query 3849 TTGCAAACGGTTTGGAGTTCCATTCGAATACAATGCAATTGCGTCTAAGAATTGGGAAAC 3908
||||||||||||||| |||||||| |||||||||||||||||||||||||| ||||||||
Sbjct 1455 TTGCAAACGGTTTGGTGTTCCATTTGAATACAATGCAATTGCGTCTAAGAACTGGGAAAC 1514
Query 3909 AATCCGGATGGAGGAGTTCAAGATCCGACCAAACGAAGTTCTTGCGGTTAATGCTGCGCT 3968
|||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||
Sbjct 1515 AATCAAGATGGAGGAGTTCAAGATCCGACCAAACGAAGTTCTTGCAGTTAATGCTGTGCT 1574
Query 3969 TCGATTCAAGAATCTCCGAGACGTTATTCCAGGCGAAGAGGATTGCCCGAGGGACGGATT 4028
||||||||||| |||||||| || |||||||| ||||||||||||||||||||||||||
Sbjct 1575 CCGATTCAAGAACCTCCGAGATGTGATTCCAGGGGAAGAGGATTGCCCGAGGGACGGATT 1634
Query 4029 TCTAAAACTGATCAGAGACATGAACCCTAACGTCTTCCTCAGTTCGACAGTTAACGGATC 4088
||||||||||||||||||||||||||||||||| |||||||| |||||||| || |||||
Sbjct 1635 TCTAAAACTGATCAGAGACATGAACCCTAACGTTTTCCTCAGCTCGACAGTCAATGGATC 1694
Query 4089 TTTCAACGCTCCGTTCTTCACCACACGGTTCAAAGAAGCTCTGTTTCACTACTCGGCGCT 4148
||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||
Sbjct 1695 TTTCAACGCACCGTTCTTCACCACACGGTTCAAAGAAGCTTTGTTTCACTACTCGGCACT 1754
Query 4149 CTTTGACTTGTTTGGTGCGACTCTGTCCAAAGAAAACCCGGAGAGGATACATTTCGAAGG 4208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1755 CTTTGACTTGTTTGGTGCGACTCTGTCCAAAGAAAACCCGGAGAGGATACATTTCGAAGG 1814
Query 4209 GGAGTTTTATGGGAGAGAAGTGATGAATGTGATAGCGTGTGAAGGAGTAGATAGAGTGGA 4268
||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1815 GGAGTTTTACGGGAGAGAAGTGATGAATGTGATAGCATGTGAAGGAGTAGATAGAGTGGA 1874
Query 4269 GAGACCGGAGACTTACAAGCAATGGCAAGTGAGGATGATTAGGGCTGGATTTAAACAAAA 4328
|||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct 1875 GAGACCTGAGACGTACAAGCAATGGCAAGTGAGGATGATAAGGGCTGGATTTAAACAGAA 1934
Query 4329 GCCTGTGGAGGCAGAGCTTGTGCAGTTGTTTAGGGAGAAGATGAAGAAATGGGGTTATCA 4388
||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct 1935 GCCAGTGGAGGCAGAGCTTGTGCAGTTATTTAGGGAAAAGATGAAGAAATGGGGTTATCA 1994
Query 4389 CAAAGACTTTGTCCTTGATGAAGATAGTAATTGGTTCTTACAAGGTTGGAAAGGTCGCAT 4448
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1995 TAAAGACTTTGTCCTTGATGAAGATAGTAATTGGTTCTTACAAGGTTGGAAAGGTCGCAT 2054
Query 4449 CCTCTTCTCTTCTTCTTGTTGGGTCCCTTCTTAG 4482
||||||||||||||||||||||||||||||||||
Sbjct 2055 CCTCTTCTCTTCTTCTTGTTGGGTCCCTTCTTAG 2088
> AT2G29060.1 | Symbols: | GRAS family transcription factor |
chr2:12481744-12484087 FORWARD LENGTH=2171
Length=2171
Score = 241 bits (130), Expect = 6e-62
Identities = 404/528 (77%), Gaps = 51/528 (10%)
Strand=Plus/Plus
Query 214 GCTGATTTCTCTGATTCGGTTTTGAAGTACATAAGCCAAGTTCTTATGGAAGAGGACATG 273
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 234 GCTGATTTCTCTGATTCTGTTTTGAAGTACATAAGCCAAGTTCTTATGGAAGAGGACATG 293
Query 274 GAAGAGAAGCCTTGTATGTTTCATGACGCCTTGGCTCTTCAAGCTGCTGAGAAATCTCTC 333
||||| |||||||||||||||||||| || || |||||||||| |||||||| ||||||
Sbjct 294 GAAGATAAGCCTTGTATGTTTCATGATGCTTTATCTCTTCAAGCAGCTGAGAAGTCTCTC 353
Query 334 TACGAGGCTCTCGGTGAGAAATACCCTTCTTCTTC-TTCTGGTTTTGTGGACCATCCTGA 392
|| || |||||||| ||||| ||||| || | ||||| | | || || |||
Sbjct 354 TATGAAGCTCTCGGCGAGAAGTACCCGG-TTGATGATTCTGATCA-G----CC-TC-TGA 405
Query 393 GAGATTGGCTTCT-GA-TAGCCCTGAC-GGTTCTT-GTTCC-GGTGGTGCTT-TTAGTGA 446
| | || || | | || | | |||| | || || |||||| ||| ||| ||
Sbjct 406 CT-ACTA-CTACTAGCCTTGCTCA-ATTGGTTAGTAGT-CCTGGTGGTTCTTCTTA-TGC 460
Query 447 TTACGCTAGCACCACTACCACTACTTCTTCTGATTCACACTGGAGTGTTGATGGTTTGGA 506
|| | |||||||| |||||| | || |||||||||| |||||| ||||| |||||||
Sbjct 461 TT-CA--AGCACCACAACCACTTC--CT-CTGATTCACAATGGAGTTTTGATTGTTTGGA 514
Query 507 GAATAG-A--CCTTC--CT-GGTTACATACACCTATGCCGAGTAATTTTGTTTTCCAGTC 560
||||| | ||||| || |||| || ||||| || |||||||| || |||| |||||
Sbjct 515 GAATAATAGGCCTTCTTCTTGGTTGCAGACACCGATCCCGAGTAACTTCATTTTTCAGTC 574
Query 561 CACTTCTAGGTCCAACAGTGTCACCGGTGGTGGTGGTAATACTGCGGTTTACGGGTCTGG 620
|| |||| | | || || | | | ||| || | ||||||| |||||| |
Sbjct 575 TACATCTAC-T--AG-AGC--CA--G-TAGCGGT---AA--C-GCGGTTTTCGGGTCAAG 619
Query 621 TTTCGGCGATGATTTGGTTTCGAATATGTTTAATGATAGTGAATTGGC-TATGCAGTTCA 679
||| ||| |||||||||||| |||||||||||||||| ||| ||||| | | || ||||
Sbjct 620 TTTTAGCGGTGATTTGGTTTCTAATATGTTTAATGATACTGACTTGGCGT-TACAATTCA 678
Query 680 AGAGAGGGGTAGAGGAAGCGAGTAAGTTCCTTCCTAA-ATCTTCTCAG 726
||| |||| | |||||||| ||||| ||||||||||| | || |||||
Sbjct 679 AGAAAGGGATGGAGGAAGCTAGTAAATTCCTTCCTAAGAGCT-CTCAG 725
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 223493731065
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5