BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg910852
Length=2622
Score E
Sequences producing significant alignments: (Bits) Value
AT1G11060.1 | Symbols: | WAPL (Wings apart-like protein regula... 4370 0.0
AT1G61030.1 | Symbols: | WAPL (Wings apart-like protein regula... 924 0.0
> AT1G11060.1 | Symbols: | WAPL (Wings apart-like protein regulation
of heterochromatin) protein | chr1:3684568-3689847 FORWARD
LENGTH=3103
Length=3103
Score = 4370 bits (2366), Expect = 0.0
Identities = 2539/2624 (97%), Gaps = 6/2624 (0%)
Strand=Plus/Plus
Query 1 ATGATGGAACGAACCTACGGCCGCCGTAAGCCGGGGATTCCGAGGACCCTATCCGACTCT 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 172 ATGATGGAACGAACCTACGGCCGCCGTAAGCCGGGGATTCCGAGGACCCTATCGGACTCT 231
Query 61 CTAAACGACTCCGTTTCTCAGACTGAGTATCTCTCTTCCTCTTCGTCGCCGGACATCGAG 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 232 CTAAACGACTCTGTTTCTCAGACTGAGTATCTCTCTTCCTCTTCGTCGCCGGACATCGAG 291
Query 121 CCCATTGATTACTCTCTCCTTCCTTTCTCCAGTCAAGAGTCTTCCTCTCTCTGGCATTCT 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 292 CCCATTGATTACTCTCTCCTTCCTTTCTCCAGTCAAGAGTCTTCCTCTCTCTGGCATTCT 351
Query 181 TCTTCTAGGTCAGATTTCAGAGAGGATTATCCACAGAACGGAGGCGTTGTACGGAGGGCG 240
||||| |||||| ||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 352 TCTTCCAGGTCAAATTTCAGAGAGGATTATCCACAGAACGGAGGTGTTGTACGGAGGGCG 411
Query 241 AAAAGAGTCAGGAACGGTGCTGAGGCTGCTGCTTTTACTTCCACTTTGCTTGAGGCTCAG 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 412 AAAAGAGTCAGGAACGGTGCTGAGGCTGCTGCTTTTACTTCCACTTTGCTTGAGGCTCAG 471
Query 301 GAGTTTGGTGAGCTGATGGAGCATGAGGATGAGGTTAACTTTGCGCTTGATGGCTTGAGG 360
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 472 GAGTTTGGTGAGCTGATGGAGCATGAGGATGAGGTTAACTTTGCGCTTGATGGGTTGAGG 531
Query 361 AAAGGACAACAGCTGAGGATCAGAAGAGCAAGCTTGTCCTCTCTATTGTCGATTTGCGCA 420
|||||||| ||||| |||||||||||||| |||||||||||||||||||||||||| |||
Sbjct 532 AAAGGACACCAGCTCAGGATCAGAAGAGCTAGCTTGTCCTCTCTATTGTCGATTTGTGCA 591
Query 421 TCTCAACACCAGCGTCGCTCCTTGAGGGCTCAAGGGATTTCCCAATCCATAATTGATGCG 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 592 TCTCAACACCAGCGTCGCTCCTTGAGGGCTCAAGGGATTTCCCAATCCATAATTGATGCG 651
Query 481 ATTTTGGCTCTTAGCCTTGATGACATACCAAGCAATCTTGCCGCAGCCACCCTTTTCTTT 540
||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 652 ATTTTGGTTCTTAGCCTTGATGATATACCAAGCAATCTTGCCGCAGCCACCCTTTTCTTT 711
Query 541 GTGTTAACTGCTGATGGTCAAGACGAGCACTTTATGGAGTCACCCAAGTGCATCAAGTTT 600
| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 712 GCGCTAACTGCTGATGGTCAAGACGAGCACTTTATGGAGTCACCCAAGTGCATCAAGTTT 771
Query 601 CTGATAAAGCTGTTGAAACCTGTGATTGTCACTAGCACCGAAGGGAAGCCACGCAATATA 660
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 772 CTGATAAAGTTGTTGAAACCTGTGATTGTCACTAGCACCGAAGGGAAGCCACGCAATATA 831
Query 661 GGATTTAAGCTCTTATCATTACTTAAGGATGTTGATGCAGCACGGGATCCAGTGAAAATG 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 832 GGATTTAAGCTCTTATCATTACTTAAGGATGTTGATGCAGCACGGGATCCAGTGAAAATG 891
Query 721 AATGATCCAAGCTCCAGTGATATACTTTCAAGAGTTCAGGAACTTCTTGTTAATTGCAAA 780
||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct 892 GATGATCCGAGCTCCAGTGATATCCTCTCAAGAGTTCAGGAACTTCTTGTTAATTGCAAA 951
Query 781 GAAATGAAATTGAATGATAGCTATAAAACTGAAACAACGAGGCCTGAGCTAAGTACGAAA 840
||||||| | ||||||||||||||| |||||||||||||||||||||||||||||| |||
Sbjct 952 GAAATGAGACTGAATGATAGCTATATAACTGAAACAACGAGGCCTGAGCTAAGTACAAAA 1011
Query 841 TGGGTAGCTTTGTTGGCCATGGAGAGGGCGTGCTTATCCAAAATTTCTTTTGATGATACT 900
|||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||
Sbjct 1012 TGGGTAGCTTTGTTGGCCATGGAGAGAGCATGCGTATCCAAAATTTCTTTTGATGATACT 1071
Query 901 TCTGGTTCTGTGAAGAAGACTGGAGGGAATTTCAAGGAGAAACTGCGAGAACTAGGAGGA 960
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1072 TCTGGTTCTGTAAAGAAGACTGGAGGGAATTTCAAGGAGAAACTGCGAGAACTAGGAGGA 1131
Query 961 CTTGATGCAGTCCTTGAGGTTGTTATGGATTGTCACGCTGTTATGGAGCGTTGGGTGGAA 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1132 CTTGATGCAGTCCTTGAGGTTGTTATGGATTGTCACGCTGTTATGGAGCGTTGGGTGGAA 1191
Query 1021 TACGATGCACTTTCCGTCCAGGAAAAGAAAGATAATCTGCATAAACAGAGTTTAATGTTG 1080
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1192 TACGACGCACTTTCCGTCCAGGAAAAGAAAGATAATCTGCATAAACAGAGTTTAATGTTG 1251
Query 1081 CTTCTGAAGTGTCTGAAACTCATGGAGAATGCTACATTCCTCAGCACAGAAAACCAGAAT 1140
|||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||
Sbjct 1252 CTTCTGAAGTGTCTGAAAATCATGGAGAATGCTACATTCCTCAGCACAGACAACCAGAAT 1311
Query 1141 CATTTGCTCGGATTTAAGAAATGTTTGGGTTCTCATGATTCCCGAATGTCTTTCACAGAG 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1312 CATTTGCTCGGATTTAAGAAATGTTTGGGTTCTCATGATTCCCGAATGTCTTTCACAGAG 1371
Query 1201 CTCACGATAAGTGTCATCAAGATGCTTTCAGGTCTTTACCTACGTGGAGGTTTTCCAAGT 1260
||||| |||||||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct 1372 CTCACAATAAGTGTCATCAAGATGCTTTCAGGTCTTCACCTACGTGGAGGTTTTTCAAGT 1431
Query 1261 CCTAACACGAACAATGTGAATTCTCACTATTCAAATGGTGGTAATCGTGATTCTATTTTG 1320
|||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||
Sbjct 1432 CCTAACACGAACAATGTGAATTCTCACTATTCAAATGGTGGTAATCATGATTCTGTTTTG 1491
Query 1321 GAAGCAGATCGGAAAGTTACCAATGAGGTTGTGACAATCAGTTCAGATACATGCTCGACC 1380
|||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1492 GAAGCAAATAGGAAAGTTACCAATGAGGTTGTGACAATCAGTTCAGATACATACTCGACC 1551
Query 1381 TTTGGCTCTATCTCCACGAGGAATGGGAGTGTATCCCAAAGAAGTCAATCAATAATCCAT 1440
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1552 GTTGGCTCTATCTCCACGAGGAATGGGAGTGTATCCCAAAGAAGTCAATCCATAATCCAT 1611
Query 1441 TTAGATTTCTCGCCAACATCAATGTCGGGTTCTCAATCAAGTGTGTCGGGGAATGAGCCT 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1612 TTAGATTTCTCGCCAACATCAATGTCGGGTTCTCAATCAAGTGTGTCGGGGAATGAGCCT 1671
Query 1501 ACTACGTCAAAAACAAGAGTCGGTTCCACCATCTCTGGTTCATTTGCAGGGAGATTAGCG 1560
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1672 ACTACGTCAAAAACAAGAGTCGGTTCCACCATCTCTGGCTCATTTGCAGGGAGATTAGCG 1731
Query 1561 TCATTGGGTAATGGCATTGCCAGAAGTACTTCAAGGACTAGTCAAGCTGGAGAACCAATC 1620
|||||||||| || ||||||||||| ||||| |||||||| |||||||||||||||||||
Sbjct 1732 TCATTGGGTAGTGACATTGCCAGAACTACTTTAAGGACTACTCAAGCTGGAGAACCAATC 1791
Query 1621 TGTAAAAGAA-TTGGAGAGTTTGCATCCCCCGATGAAAGCGAAGATCCTTTTGCGTTTGA 1679
||||||| || |||||||||||||| ||||||| ||||||||||||||||||||||||||
Sbjct 1792 TGTAAAA-AATTTGGAGAGTTTGCACCCCCCGAGGAAAGCGAAGATCCTTTTGCGTTTGA 1850
Query 1680 TTTGGAAGATGCTAAACCTTCCAAGTGGGCAGTAGTGTCCGTAAACCAAAAGAAGTCTAG 1739
||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 TTTAGAAGATTATAAACCTTCCAAGTGGGCAGTAGTGTCCGTAAACCAAAAGAAGTCTAG 1910
Query 1740 AGCTCAAAAGAAGAAAGGATGCTACAAACAAAGTAAAGATGAAAGTTTGTATCAGCTGTT 1799
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1911 AGCTCAAAAGAAGAAAGGATGCTACAAACAAAGTAAAGATGAAAGTTTGTATCAGCTGTT 1970
Query 1800 CTCAAGCCAAGAAGAATCGTCAAACCATAGGTTGAATTCCCAAGAAGAATCAAGTAACAG 1859
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct 1971 CTCAAGCCAAGAAGAGTCATCAAACCATAGGTTGAATTCCCAAGAAGAATCAAGTAACAG 2030
Query 1860 AGACTGCAGTACATCGCTGCAACCATCTTC-TTGTACAAATGACATAGATGAAGAATGTC 1918
||||||||||||||||||||||||||| || ||||||||||||||| |||||||||||||
Sbjct 2031 AGACTGCAGTACATCGCTGCAACCATC-TCATTGTACAAATGACATTGATGAAGAATGTC 2089
Query 1919 TCTGTCTTTTATCTGATTGCCTTCTAACAGCCGTAAAGGTTTTGATGAACTTAACAAATG 1978
|||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2090 TCTGTCTTTTATTTGATTGCCTTCTGACAGCCGTAAAGGTTTTGATGAACTTAACAAATG 2149
Query 1979 ACAACGCTGTCGGATGTCGACAAGTTGGTGGGTGTAGAGGGCTGGAAAGCATGGCTGAGT 2038
| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 2150 ATAACGTTGTCGGATGTCGACAAGTTGGTGGGTGTAGAGGGCTGGAAAGCATGGCTGAAT 2209
Query 2039 TAATTGCCAGACACTTTCCATCTTTCACCAAATCTCCGCTTTTCAGTGAGATGGAAAAGA 2098
||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||
Sbjct 2210 TAATTGCCAGACACTTTCCGTCTTTCACCAGATCTCAGCTTTTCAGTGAGATGGAAAAGA 2269
Query 2099 CAGGATCGTCCCATCAGAAGAAAGACAAACATCTTACAGATCAGGAGTTAGATTTTCTTG 2158
| ||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||
Sbjct 2270 CGGGATCGTCCCATCAGAAGAAAGACAAATACCTTACCGATCAGGAGTTAGATTTTCTTG 2329
Query 2159 TTGCCATCTTGGGCTTGCTGGTAAATTTGGTTGAGAA-AGACGGAGTGAACAGATCACGG 2217
||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||
Sbjct 2330 TTGCCATCTTGGGTTTGCTGGTAAATTTGGTTGA-AAGAGACGGAGTGAACAGATCACGG 2388
Query 2218 CTTGCTTCAGCGAGTGTTCCTATTACAAAACCAGAAGGGTTGCAAGAGAGTGAACAGGAA 2277
||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||
Sbjct 2389 CTTGCTTCAGCGAGTGTTCCTATTACAAAACCAGAAGAGTTGCAAGAAAGTGAACAGGAA 2448
Query 2278 ATGATTCCTTTACTATGTTCAATCTTTCTCACCAATCAAGGATCAGCAGAGACCAAAGAA 2337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2449 ATGATTCCTTTACTATGTTCAATCTTTCTCACCAATCAAGGATCAGCAGAGACCAAAGAA 2508
Query 2338 GAGACAACTACTTTCACCTTAGATGATGAGGAAGCTGTTTTAGAAGGCGAAAAAGAGGCG 2397
||||||||||| ||||||||||||||||| ||||||||||||||||||||||| || |||
Sbjct 2509 GAGACAACTACCTTCACCTTAGATGATGAAGAAGCTGTTTTAGAAGGCGAAAAGGAAGCG 2568
Query 2398 GAAAAGATGATTGTGGAAGCATACTCTGCTCTACTACTCGCCTTTCTTTCAACTGAAAGT 2457
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2569 GAAAAGATGATTGTAGAAGCATACTCTGCTCTACTACTCGCCTTTCTTTCAACTGAAAGT 2628
Query 2458 ATAAGTATACGCAACTCCATCAAGGACTATCTCCCGAAACGCAATCTGGCAATTCTTGTA 2517
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2629 AGAAGTATACGCAACTCCATCAAGGACTATCTCCCGAAACGCAATCTGGCAATTCTTGTA 2688
Query 2518 CCGGTTTTGGAAAGATTTGTGGCATTTCACATGACTCTGAACATGATCCCTCCGGAGACA 2577
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2689 CCGGTTTTGGAAAGATTTGTGGCATTTCACATGACTCTGAACATGATCCCTCCGGAGACA 2748
Query 2578 CATAAAGCAGTGATGGAAGTGATTAAATCATGCAAATTACCGTA 2621
|||||||||||||||| ||||||| |||| ||||||| ||||||
Sbjct 2749 CATAAAGCAGTGATGGGAGTGATTGAATCCTGCAAATCACCGTA 2792
> AT1G61030.1 | Symbols: | WAPL (Wings apart-like protein regulation
of heterochromatin) protein | chr1:22477896-22482380
FORWARD LENGTH=2896
Length=2896
Score = 924 bits (500), Expect = 0.0
Identities = 822/978 (84%), Gaps = 20/978 (2%)
Strand=Plus/Plus
Query 279 TTCCACTTTGCTTGAGGCTCAGGAGTTTGGTGAGCTGATGGAGCATGAGGATGAGGTTAA 338
||| |||||| | |||||||| ||||| || ||| | || ||| ||||||| || |||||
Sbjct 307 TTCGACTTTGATGGAGGCTCAAGAGTTCGGCGAGTTAATTGAGAATGAGGACGAAGTTAA 366
Query 339 CTTTGCGCTTGATGGCTTGAGGAAAGGACA-ACAGCTGAGGATCAGAAGAGCAAGC-TTG 396
||| || |||||||| |||| ||||||||| | || | |||||||||||||| || |||
Sbjct 367 CTTCGCTCTTGATGGGTTGAAGAAAGGACATAAAG-TTAGGATCAGAAGAGC-TGCTTTG 424
Query 397 TCCTCTCTATTGTCGATTTGCGCATCTCAACACCAGCGTCGCTCCTTGAGGGCTCAAGGG 456
||||||||| | |||||||| | |||||| | ||||| ||||| ||||| ||| ||||
Sbjct 425 TCCTCTCTACTCTCGATTTGTGAATCTCAGTATCAGCGACGCTCTTTGAGAGCTTTAGGG 484
Query 457 ATTTCCCAATCCATAATTGATGCGATTTTGGCTCTTAGCCTTGATGACATACCAAGCAAT 516
|| || || |||||||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct 485 ATCTCACAGTCCATAATTGATGCGATTTTGGGTCTTTGCCTTGATGACATACCAAGCAAT 544
Query 517 CTTGCCGCAGCCACCCTTTTCTTTGTGTTAACTGCTGATGGTCAAGACGAGCACTTTATG 576
||||| ||||| ||||||||||||||| ||||| ||||||||||||| || |||||||||
Sbjct 545 CTTGCTGCAGCTACCCTTTTCTTTGTGCTAACTACTGATGGTCAAGATGATCACTTTATG 604
Query 577 GAGTCACCCAAGTGCATCAAGTTTCTGATAAAGCTGTTGAAACCTGTGATTGTC-ACTAG 635
||||||||||| | |||||||||| || | |||||||||| ||||||| || || | ||
Sbjct 605 GAGTCACCCAACTCCATCAAGTTTTTGGTTAAGCTGTTGAGACCTGTGGTT-TCTGCCAG 663
Query 636 CACCGAAGGGAAGCCACGCAATATAGGATTTAAGCTCTTATCATTACTTAAGGATGTTGA 695
|| ||| ||||| || |||||||||| || |||||||||| || | |||||||||||
Sbjct 664 TACTAAAGTAAAGCCGCGGAATATAGGATCTAGGCTCTTATCAATAATCAAGGATGTTGA 723
Query 696 TGCAGCACGGGATCCAGTGAAAATGAATGATCCAAGCTCCAGTGATATACTTTCA-AGAG 754
||||||||| ||| ||| | ||| ||||| ||||||| |||||||| || | ||||
Sbjct 724 TGCAGCACGTGATGCAGCCAGTATGCATGATTTAAGCTCCTGTGATATA-ATTGACAGAG 782
Query 755 TTCAGGAACTTCTTGTTAATTGCAAAGAAATGAAATTGAATGATAGCTATAAAACT-GAA 813
||||||| |||||||||||||||| || ||| ||||| |||||||||||||| | ||
Sbjct 783 CTCAGGAAATTCTTGTTAATTGCAAGGAGTTGAGATTGATTGATAGCTATAAAA-TCGAG 841
Query 814 ACAACGAGGCCTGAGCTAAGTACGAAATGGGTAGCTTTGTTGGCCATGGAGAGGGCGTGC 873
| | |||||||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct 842 AGGATGAGGCCTGAGCTAAGTACGAAATGGGTAGCTTTGTTGGTGATGGAGAAGGCGTGC 901
Query 874 TTATCCAAAATTTCTTTTGATGATACTTCTGGTTCTGTGAAGAAGA-CTGGAGGGAAT-T 931
|| |||||||| |||||||||||||| |||||| ||||||| || | ||||| ||||| |
Sbjct 902 TTGTCCAAAATCTCTTTTGATGATACCTCTGGTACTGTGAA-AAAATCTGGA-GGAATGT 959
Query 932 TCAAGGAGAAACTGCGAGAACTAGGAGGACTTGATGCAGTCCTTGAGGTTGTTATGGATT 991
|||||||||||||| ||||||| |||||||||||||| ||| |||| |||||||||||||
Sbjct 960 TCAAGGAGAAACTGAGAGAACTTGGAGGACTTGATGCTGTCTTTGATGTTGTTATGGATT 1019
Query 992 GTCACGCTGTTATGGAGCGTTGGGTGGAAT-ACGATGCACTTTCCGTCCAGGA-AAAGAA 1049
| ||| |||| |||||| | ||||| || | | || |||| || ||| |||| | | ||
Sbjct 1020 GCCACACTGTAATGGAGAGCTGGGT-GACTCATGACACACTCTCTGTCGAGGATATA-AA 1077
Query 1050 AGAT-AATCTGCATAAACAGAGTTTAATGTTGCTTCTGAAGTGTCTGAAACTCATGGAGA 1108
|||| | | || |||| |||||| | ||||| |||||||| ||||| ||| |||||||||
Sbjct 1078 AGATGACT-TGAATAAGCAGAGTCTGATGTTACTTCTGAAATGTCTAAAAATCATGGAGA 1136
Query 1109 ATGCTACATTCCTCAGCACAGAAAACCAGAATCATTTGCTCGGATTTAAGAAATGTTTGG 1168
|||||||||||||||||||||||||||||| |||||||||| || |||| ||| | |||
Sbjct 1137 ATGCTACATTCCTCAGCACAGAAAACCAGATTCATTTGCTCAGACTTAATAAAAGCATGG 1196
Query 1169 GTTCTCATGATTCCCGAATGTCTTTCACAGAGCTCACGATAAGTGTCATCAAGATGCTTT 1228
|||||||||| |||||| |||||||||||||||||| ||||||||||||||| || ||||
Sbjct 1197 GTTCTCATGAATCCCGACTGTCTTTCACAGAGCTCATGATAAGTGTCATCAAAATACTTT 1256
Query 1229 CAGGTCTTTACCTACGTG 1246
|||||||| | ||||||
Sbjct 1257 CAGGTCTTCAGTTACGTG 1274
Score = 769 bits (416), Expect = 0.0
Identities = 1017/1298 (78%), Gaps = 77/1298 (6%)
Strand=Plus/Plus
Query 1349 TTGTGAC-A--ATCAGTTCAGATACATGCTCGACCTTTGGCTCTATCTCCACGAGGAA-T 1404
||||||| | || ||||||||||| ||||| ||| ||||| || ||||| | || |
Sbjct 1338 TTGTGACAATTATTAGTTCAGATACTTGCTCTACCACTGGCTTTAGCTCCA-TAAAAAGT 1396
Query 1405 GGGAGTGTATCCCAA-AGAAGTCAATCAATAATCCAT-TTAGATTTCTCGCCAACATCAA 1462
||| |||| |||| |||| ||| || | ||| | ||| || ||| | ||| |||
Sbjct 1397 TTGAGCGTAT-CCAAGAGAAATCAGTCTGCATTCC-TGGTAGGTTGCTCAACGACACCAA 1454
Query 1463 TGTCGGGTTCTCAATCAAGTG---TGTCGGGGAA-TGAGC-CTACTACGTC-AAAAACAA 1516
| |||| ||||||||||||| |||| | || ||| | || | ||| | | || |
Sbjct 1455 AGCCGGGGTCTCAATCAAGTGTAATGTC-GACAATTGATCACTGC-ACG-CTGACGACTA 1511
Query 1517 GAGTC-GGTTCCACCATCTCTGGTTCATTTGCAGGGAGATTAGCGTCATTGGGTAATGGC 1575
|| | ||||||| | | |||| || |||||||| |||||||| |||||||||| ||||
Sbjct 1512 CAG-CTGGTTCCA--A-CACTGGGTCGTTTGCAGGCAGATTAGCCTCATTGGGTAGTGGC 1567
Query 1576 ATTGCCAGAAGTACTTCAAGGACTAGTCAAGCTGGAGAA-CCAATCTGTAAAAGAA-TTG 1633
||| ||||||||| |||||||||| ||| || ||||| ||| | ||||||| || |||
Sbjct 1568 ATTTCCAGAAGTAAAACAAGGACTAGCCAAACTAGAGAATCCAGT-TGTAAAA-AAGTTG 1625
Query 1634 GAGAGTTTGCATCCCCCGATGAAAG-CGAAGATCCTTTTGCGTTTGATTTGGAAGATGCT 1692
| | ||||||||| ||| || || | ||||||||||| | |||||||| |||||| |
Sbjct 1626 AAAACTTTGCATCCTTCGAGGATAGTC-AAGATCCTTTTTCATTTGATTTAGAAGATTC- 1683
Query 1693 A-AACCTTCCAAG-TGGGCAGTAGTGTCCGTAAACCAAAAGAAGTCTAGAGCTCAAAAGA 1750
| ||||||| || ||||||||| | | ||| |||||||| |||| || ||||||||
Sbjct 1684 AGGACCTTCC-AGATGGGCAGTA--G---G-AAAGCAAAAGAAATCTAAAGGTCAAAAGA 1736
Query 1751 AGAAAGGATGCTACAAACA-AAGTAAAGATGAAAGTTTG-TATCAGCTGTTCTCAAGCCA 1808
||| ||| |||||| | | ||| ||||||||| | | | | |||||| ||||| |||||
Sbjct 1737 GGAAGGGAAGCTACAGAGATAAG-AAAGATGAACGCTCGCT-TCAGCTCTTCTCGAGCCA 1794
Query 1809 AGAAGAATCGTCAAACCATAGG-TTGAATTCCCAAGAAGAATCAAGTAACAGAGA-CTGC 1866
|| ||| ||||||||| || || ||||| || || ||||||||| | ||||| | |
Sbjct 1795 GGAGGAA---TCAAACCAT-GGTTTAAATTCTCAGGAGGAATCAAGTGATAGAGATCACC 1850
Query 1867 A-GT-ACATCGCTGCAACCATCTTCTTGT-ACAAATGACATAGATGAAGAATGTCTCTGT 1923
| || ||| | |||| | |||||| | ||| ||||||| ||| ||| ||||||||||
Sbjct 1851 ATGTAACA--G-AGCAA-C--CTTCTT-TAACATATGACATTGATAAAGGATGTCTCTGT 1903
Query 1924 CTTTTATCTGATTGCCTTCTAACAGCCGTAAAGGTTTTGATGAACTTAACAAATGACAAC 1983
|||||||||||||||||| |||||||||| ||||| || |||||| ||||||||| ||
Sbjct 1904 CTTTTATCTGATTGCCTTTTAACAGCCGTGAAGGTATTAATGAACCTAACAAATGGTAAT 1963
Query 1984 GCTGTCGGATGTCGACAAGTTGGTGGGTGTAGAGGGCTGGAAAGCATGGCTGAGTTAATT 2043
|||| || ||||| |||||| || || |||| ||||| ||||||||||| ||| ||
Sbjct 1964 TCTGTTGGTTGTCGGGAAGTTGCTGCCTGCGGAGGACTGGAGAGCATGGCTGAATTAGTT 2023
Query 2044 GCCAGACACTTTCCATCTTTCACCAAATCTCCGCTTTTCAGTGAGATGGAAAAGACAGG- 2102
| |||||||||| || ||||||| ||||||||||| |||| ||||||| | | ||
Sbjct 2024 GTTGGACACTTTCCTTCCTTCACCAGATCTCCGCTTTACAGTCAGATGGA---GTCCGGG 2080
Query 2103 ATCGTCCCATCAGAAGAAAGACAAACATCTTACAGATCAGGAGTTAGATTTTCTTGTTGC 2162
| | | ||| ||||| | || |||||||| ||||| ||||| |||||||||||||||||
Sbjct 2081 A-CATGCCACCAGAA-A--GATAAACATCTCACAGACCAGGAATTAGATTTTCTTGTTGC 2136
Query 2163 CATCTTGGG-CTTGCTGGTAAATTTGGTTGAGAAAGACGGAGTGAACAGATCACGGCTTG 2221
|||| |||| || |||||||| ||||| |||||| ||||| | ||||| ||| |||| |
Sbjct 2137 CATCCTGGGGCTA-CTGGTAAACTTGGTGGAGAAAAACGGAATAAACAGGTCAAGGCTCG 2195
Query 2222 CTTCAGCGAGTGTTCCTATTACAAAACCAGAAGGGTTGCAAGAGAGTGAACAGGAAATGA 2281
| |||| |||||||| ||||| || ||||||||||| ||||| |||||||| || ||||
Sbjct 2196 CGGCAGCTAGTGTTCCGATTACCAATCCAGAAGGGTTACAAGATAGTGAACAAGACATGA 2255
Query 2282 TTCCT-TTACTATGTTCAATCTTTCTCACCAATCAAGGATCAGCAGAGACCAAAGAAGAG 2340
| ||| || ||||||||||||||||||||||| ||||||| ||||| |||||||| ||
Sbjct 2256 TCCCTCTTT-TATGTTCAATCTTTCTCACCAATAAAGGATCCGCAGACACCAAAGATGAA 2314
Query 2341 ACAACTACTTTCACCTTAGATGATGAGGAAGCTGTTTTAGAAGGCGAAAAAGAGGCGGAA 2400
|| | ||||||||| || || ||||| ||||||||||||||| ||||||| || ||||||
Sbjct 2315 ACGAGTACTTTCACTTTGGACGATGAAGAAGCTGTTTTAGAAAGCGAAAAGGAAGCGGAA 2374
Query 2401 AAGATGATTGTGGAAGCATACTCTGCTCTACTACTCGCCTTTCTTTCAACTGAAAGTATA 2460
|||||||| ||||| ||||| ||||| || ||||| || ||||| || || ||||||| |
Sbjct 2375 AAGATGATCGTGGAGGCATATTCTGCCCTTCTACTTGCATTTCTATCCACAGAAAGTAGA 2434
Query 2461 AGTATACGCAACT-CCATCA-AGGACTATCTCCCGAAACGCAATC-TGGCAATTCTTGTA 2517
|||||||| || | |||||| || | |||||||| |||||| | | |||||||||| |||
Sbjct 2435 AGTATACGAAA-TGCCATCAGAG-ATTATCTCCCAAAACGCGA-CATGGCAATTCTGGTA 2491
Query 2518 CCGGTTTTGGAAAGATTTGTGGCATTTCACATGACTCTGAACATGATCCCTCCGGAGACA 2577
|| || ||||| ||||||||||| ||||| | || ||| ||||||| ||||| || |||
Sbjct 2492 CCCGTGTTGGATAGATTTGTGGCGTTTCATACAACACTGGACATGATTCCTCCAGAAACA 2551
Query 2578 CATAAAGCAGTGATGGAAGTGATTAAATCATGCAAATT 2615
||||||| || |||||||| || | || ||||||||
Sbjct 2552 CATAAAGTGGTTATGGAAGTTATCGAGTCGTGCAAATT 2589
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 130183217085
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5