BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg910879
Length=2469
Score E
Sequences producing significant alignments: (Bits) Value
AT1G61420.1 | Symbols: | S-locus lectin protein kinase family ... 800 0.0
AT1G61500.1 | Symbols: | S-locus lectin protein kinase family ... 723 0.0
AT1G61400.1 | Symbols: | S-locus lectin protein kinase family ... 534 1e-150
AT2G48010.1 | Symbols: RKF3 | receptor-like kinase in in flower... 52.8 2e-05
> AT1G61420.1 | Symbols: | S-locus lectin protein kinase family
protein | chr1:22660460-22663963 REVERSE LENGTH=2681
Length=2681
Score = 800 bits (433), Expect = 0.0
Identities = 1197/1554 (77%), Gaps = 99/1554 (6%)
Strand=Plus/Plus
Query 849 CTCATGTGATCT-CTACGGTACATGTGGACCTTATGGTTTGTGTATGAGGTCCATTAG-T 906
|||||||||| | ||||||| ||||||||||| ||| || ||| ||| || | | | |
Sbjct 1000 CTCATGTGAT-TACTACGGTGTATGTGGACCTTTTGGGTTATGTGTGAAGT-C--T-GTT 1054
Query 907 ACTCCAACCTGCAAATGCTTGAGAGGGTTTGTGCC-AAAGTCAGATGATGAGTGGAATAA 965
|||||| || | || || | ||||||||| || ||| ||| ||| |||||||| ||
Sbjct 1055 CCTCCAAAATGTACGTGTTTCAAAGGGTTTGTTCCTAAACTCA-TTGAGGAGTGGAA-AA 1112
Query 966 -TGGAAACTGGACTCGTGGGTGTGTGAGACGAACATAATTATCATCATGTCAGGGAAATT 1024
|||||||||||| |||| |||||||| || || || ||| || ||||| |||||
Sbjct 1113 GAGGAAACTGGACTGGTGGTTGTGTGAGGCGTACCGAACTAT-AT--TGTCAAGGAAA-- 1167
Query 1025 CTGCGTCAACAACACAAGGCAAAGACACACCAGACG-GATTTTA-CCGTGTTGCCAATAT 1082
|| | | || |||||| | || | ||| | || | || |||||||| ||
Sbjct 1168 CT-C-T-------AC-TGGCAAATATGCA--A-ACGTG-TTCCATCC-TGTTGCCAGGAT 1212
Query 1083 TAAGCCTCCAGA-TTCTTACGAATTAACAAGCTTTGGTG-ATGCAGAACAATGCCATAAA 1140
||||||||||| || ||||||||| |||| ||| ||| ||| ||| ||||||| |||
Sbjct 1213 AAAGCCTCCAGACTT-TTACGAATTTGCAAG-TTTTGTGAATGTTGAAGAATGCCAGAAA 1270
Query 1141 GGATGTCTCCGCAACTGTTCTTGCTTGGCCTTTGCCTATATTAATAAAATTGGATGCTTG 1200
| || |||| ||| |||||||||||||||||||| ||||| || |||||| |||||
Sbjct 1271 AGTTGCCTCCACAATTGTTCTTGCTTGGCCTTTGCTTATATCGATGGAATTGGGTGCTTA 1330
Query 1201 GTGTGGAACCAGGAGCTATTGGACATGGTTCAGTTTACTGAAGAAGGAGAGTTTCTTTCC 1260
|||||||||| || ||| ||||| || || ||| |||||| |||||| |||| |||
Sbjct 1331 ATGTGGAACCAAGACCTAATGGACGCAGTGCAATTTTCTGAAGGAGGAGAACTTCTCTCC 1390
Query 1261 ATCCGTCTTGCATGTTCTGAGTTAGCTAGAGGCAAGCG-AATCAAGATCATCGCTGTTAG 1319
|| ||||| ||| ||||||| ||| | || ||||| || ||| ||| ||| |||
Sbjct 1391 ATTCGTCTGGCACGTTCTGAACTAGGTGGAAATAAGCGCAA-GAAGGCCATTACTGCTAG 1449
Query 1320 CGCTATTAGCCTTTGT-GTGTTTTTTAT-CTTGGTGCTTGCTGCATTTGGGTGT-TGGAG 1376
| | ||||||| | || || | || || | | ||| ||| ||| || | |||||
Sbjct 1450 TATTGTGAGCCTTTCTCTTG-TTGTGATAATT-GCGTTTGTTGCGTTT-TGTTTCTGGAG 1506
Query 1377 ATACAGAGTGAAACAAAATGGTGAAGCTCGTGTAGCCATGGATATTTCAGAAGATTCTTG 1436
||| ||||||||||| |||| || | | || | | |||| |||| ||| ||| ||
Sbjct 1507 ATATAGAGTGAAACATAATGCTG-A-----TATAACAACGGATGCTTCACAAGTTTCATG 1560
Query 1437 GAAGAATGGTTTGCAATCACATGATGTCTCAGGTTCAAATTTCTTTGAGATGCATACCAT 1496
|| ||||| | || || |||| |||||| |||||| | |||||||||| |||||||||||
Sbjct 1561 GAGGAATGATCTGAAACCACAAGATGTCCCAGGTTTAGATTTCTTTGATATGCATACCAT 1620
Query 1497 ACAAGCAGCGACCGATAATTTCAGCGTGTCAAATC-AACTCGGTCAAGGTGGATTTAGAA 1555
||| | || ||| |||||||||| | ||||| | ||||||| |||||||||||| |
Sbjct 1621 TCAAACTGCCACCAATAATTTCAGTATATCAAA-CAAACTCGGACAAGGTGGATTTGGCC 1679
Query 1556 CAGTTTATAAGGGAAAGCTAAAAGATGGGAAAGAAATAGCTATAAAACGTCTTTCTAACA 1615
| ||||||||||| ||||| |||||||||||||||| ||| ||||||| ||||||| ||
Sbjct 1680 CTGTTTATAAGGGTAAGCTGCAAGATGGGAAAGAAATTGCTGTAAAACGGCTTTCTAGCA 1739
Query 1616 GCTCTGGAGAGGGCACAGAGGAATTCATGAACGAATTAAAACTCATCTCAAAACTACAAC 1675
|||| || |||||| |||||| |||||||| ||| || ||||||||||||||||||||
Sbjct 1740 GCTCGGGCCAGGGCAAAGAGGAGTTCATGAATGAAATAGTACTCATCTCAAAACTACAAC 1799
Query 1676 ACAGAAACTTGGTTCGGCTTTTAGGATATTGTATTGAAGGAGAAGAGAAGCTATTGATTT 1735
| | |||||| |||||| |||| |||| ||| ||||||||||||||||||||||||||||
Sbjct 1800 ATAAAAACTTAGTTCGGATTTTGGGATGTTGCATTGAAGGAGAAGAGAAGCTATTGATTT 1859
Query 1736 ATGAGTTTATGGTCAACAAAAGCCTTGACACTTTTCTCTTCGATTTGAAGAAGAAG-CTG 1794
||||||| ||| | ||||| |||||||| || ||||||||||||| ||||| ||| ||
Sbjct 1860 ATGAGTTCATGTTGAACAATAGCCTTGATACCTTTCTCTTCGATTC-AAGAAAAAGGCTT 1918
Query 1795 GAGATTGATTGGCCTAAGAGATTCAATATCATTCAAGGTATTGCTCGTGGACTTCTCTAT 1854
|||||||| ||||| |||||||| ||||||||||||||||||| |||||| ||| ||||
Sbjct 1919 GAGATTGACTGGCCAAAGAGATTGGATATCATTCAAGGTATTGCGCGTGGAATTCACTAT 1978
Query 1855 CTCCATCGCGACTCATTCCTCAGAG-TTGTACATCGCGATCTAAAGGCCAGCAACATTCT 1913
|||||||| |||||| ||||| || || | || || ||||| |||| ||||| |||||
Sbjct 1979 CTCCATCGTGACTCACACCTCA-AGGTTATTCACCGAGATCTGAAGGTTAGCAATATTCT 2037
Query 1914 -CTTGGACGAGAAGATGAATCCCAAA-ATATCAGATTTTGGGTTGGCTAGGAAGTTTCAA 1971
|||| |||||||||||||||| ||| |||||||||||||| |||||| ||| || |||
Sbjct 2038 TCTTG-ACGAGAAGATGAATCC-AAAGATATCAGATTTTGGATTGGCTCGGATGTATCAG 2095
Query 1972 GGAACTCAAA-ATCAAGACAACAGTGGCAGAGTATTT-GGAACTTTGGGATACATGTCTC 2029
||||| | || |||| ||||| | | |||| || | | |||||| | ||||| ||| |||
Sbjct 2096 GGAAC-CGAATATCAGGACAATACTCGCAGGGT-TGTAGGAACTCTAGGATATATGGCTC 2153
Query 2030 CTGAATATGCGTGGACAGGGACATACTCTGAGAAA-TCTGACATTTATAGCTTTGGGGTT 2088
|||| ||||| ||||| |||| | ||||| ||| || ||||| ||||||||||| |||
Sbjct 2154 CTGAGTATGCATGGACTGGGATGTTTTCTGA-AAAGTCCGACATCTATAGCTTTGGAGTT 2212
Query 2089 TTGATGCT-GAAAATCATCAGCGGGAAAGA-GATATCGAGCTTTAGCCATGGGAAAGAGG 2146
| ||| | |||| |||| |||||| | || ||| || || || ||| |||| ||||| |
Sbjct 2213 CTAATGTTAGAAA-TCATAAGCGGGGA-GAAGATCTCAAGATTCAGCTATGGCAAAGAAG 2270
Query 2147 AAAAAACCCTTGTTGCATATGCATGGGAATCATGGAGCGAAACCGGAGGAGTGGATCTAC 2206
||||||||||| |||||||||| |||||||| ||| | || || |||||| | ||||| |
Sbjct 2271 AAAAAACCCTTATTGCATATGCGTGGGAATCTTGGTGTGATACTGGAGGAATTGATCT-C 2329
Query 2207 T-GGATCAAGACATTGATGTTTTAGATTCA-GTTGA--A--GCA-GT-GATGAGATGTGT 2258
| ||| ||| | ||||| |||||| || | | | | || || |||||||||
Sbjct 2330 TTGGA-CAA-A----GATGTCGCCGATTCATGTCGCCCACTGGAAGTTGA-GAGATGTGT 2382
Query 2259 TCAGATAGG-CTTGCTCTGTGTTCAACACCAAGCAATG--GACAGACCAAACATCAAACA 2315
|||||| || || ||||||||||||||||||| | || || ||||| |||| ||
Sbjct 2383 TCAGATCGGTCT-GCTCTGTGTTCAACACCAACC--TGCAGATAGACCCAACA-CACTTG 2438
Query 2316 AGCTG-TGTCAATGCTGACGTCAACAATG-GATCTTCCAA-AGCCAAAACAACC 2366
|| || |||| ||||| || ||||| | ||||||||| | ||| |||||||
Sbjct 2439 AGTTGCTGTCTATGCTCACCACAACA-TCAGATCTTCCACCA-CCAGAACAACC 2490
> AT1G61500.1 | Symbols: | S-locus lectin protein kinase family
protein | chr1:22689729-22692881 REVERSE LENGTH=2415
Length=2415
Score = 723 bits (391), Expect = 0.0
Identities = 1034/1332 (78%), Gaps = 94/1332 (7%)
Strand=Plus/Plus
Query 1073 TTGCCAATATTAAGCCTCCAGA-TTCTTACGAATTAACAAGCTT-TGGTG-ATGCAGAAC 1129
||||||| || ||||||||||| || ||| ||||| |||| || | ||| |||| |||
Sbjct 1046 TTGCCAACATAAAGCCTCCAGACTT-TTATGAATTTGCAAG-TTCT-GTGAATGCTGAAG 1102
Query 1130 AATGCCATAAAGGATGTC-TCCGCAACTGTTCTTGCTTGGCCTTTGCCTATATTAATAAA 1188
||||||| || | || | ||| ||| |||||||||||||| ||||| |||||||| |
Sbjct 1103 AATGCCACCAACGTTG-CGTCCACAATTGTTCTTGCTTGGCATTTGCTTATATTAAGGGA 1161
Query 1189 ATTGGATGCTTGGTGTGGAACCAGGAGCTATTGGACATG--GTTCAGTTTACTG-AAGAA 1245
|| || ||| | |||||||||||||| ||| ||| ||| || || ||| ||| || |
Sbjct 1162 ATAGGGTGCCTAGTGTGGAACCAGGACCTAATGG--ATGCCGTACAATTTTCTGCAA-CA 1218
Query 1246 GGAGAGTTTCTTTCCATCCGTCTTGCATGTTCTGAGTTAGCTAGAGGCAAGCG-AATCAA 1304
||||| |||||||||| ||||||||| | |||||| ||| | || ||||| || ||
Sbjct 1219 GGAGAACTTCTTTCCATTCGTCTTGCACGATCTGAGCTAGATGGAAATAAGCGCAA-GAA 1277
Query 1305 GATC-ATCGCTGTTAGCGCTA-TTAGCCTTTGTGTGTTTTTTATCTTGGTGCTT-GCTGC 1361
|| | || | || ||| || | ||||| | | || | ||||||| |||| ||||
Sbjct 1278 GA-CTATTGTTGCTAG-TATAGTGAGCCTGACTCTATTCATGATCTTGG-GCTTCACTGC 1334
Query 1362 ATTTGGGTGT-TGGAGATACAGAGTGAAACAAAATGGTGAAGCTCGTGTAGCCATGGATA 1420
||| ||||| ||||||| ||||||| ||| | | | ||| | ||| |||
Sbjct 1335 GTTT-GGTGTCTGGAGATGCAGAGTGGAAC---A---T--A--TCG-CT---CAT--ATA 1377
Query 1421 TTTCAGAA-GATTCTTGGAAGAATGGTTTGCAATCACATGATGTCTCAGGTTCAAATTTC 1479
||| || ||| | |||||||||| | || || |||| |||||| |||||| | |||||
Sbjct 1378 --TCA-AAGGATGCATGGAAGAATGATCTGAAACCACAAGATGTCCCAGGTTTAGATTTC 1434
Query 1480 TTTGAGATGCATACCATAC-AAGCAGCGACCGATAATTTCAG-CGTGTCAAATC-AACTC 1536
||||| ||||||||||| | || | || ||| ||||||| || | | ||||| | |||||
Sbjct 1435 TTTGATATGCATACCATTCAAAAC-GCCACCAATAATTTTAGTC-TATCAAA-CAAACTC 1491
Query 1537 GGTCAAGGTGGATTTAGAACAGTTTATAAGGGAAAGCTAAAAGATGGGAAAGAAATAGCT 1596
|| |||||||||||| | ||||||| ||||||||||| |||||||||||||||| |||
Sbjct 1492 GGACAAGGTGGATTTGGTTCAGTTTACAAGGGAAAGCTGCAAGATGGGAAAGAAATTGCT 1551
Query 1597 ATAAAACGTCTTTCTAACAGCTCTGGAGAGGGCACAGAGGAATTCATGAACGAATTAAAA 1656
| ||||| ||||||| |||||||||| |||| | |||||| || ||||| ||| || |
Sbjct 1552 GTTAAACGGCTTTCTAGCAGCTCTGGACAGGGAAAAGAGGAGTTTATGAATGAAATAGTA 1611
Query 1657 CTCATCTCAAAACTACAACACAGAAACTTGGTTC-GGCTTTTAGGATATTGTATTGAAGG 1715
|||||||||||||| |||||||||||||| | || || |||| |||| ||| || ||||
Sbjct 1612 CTCATCTCAAAACTCCAACACAGAAACTTAG-TCAGGGTTTTGGGATGTTGCATCGAAGA 1670
Query 1716 AGAAGAGAAGCTATTGATTTATGAGTTTATGGTCAACAAAAGCCTTGACACTTTTCTCTT 1775
||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||
Sbjct 1671 AGAAGAGAAGCTATTGATTTATGAGTTTATGGTGAACAAAAGCCTTGATACCTTTCTCTT 1730
Query 1776 CGATTTGAAGAAGAAG-CTGGAGATTGATTGGCCTAAGAGATTCAATATCATTCAAGGTA 1834
|||| ||||| ||| ||||||||||||||||| || ||||| |||||||||||||||
Sbjct 1731 TGATTC-AAGAAAAAGGCTGGAGATTGATTGGCCAAAAAGATTTGATATCATTCAAGGTA 1789
Query 1835 TTGCTCGTGGACTTCTCTATCTCCATCGCGACTCATTCCTCAGAGTTGTACATCGCGATC 1894
|||| |||||||||||||||||||| | |||||| |||||||||| | || || || |
Sbjct 1790 TTGCACGTGGACTTCTCTATCTCCACCATGACTCACGCCTCAGAGTTATTCACCGAGACC 1849
Query 1895 TAAAGGCCAGCAACATTCT-CTTGGACGAGAAGATGAATCCCAAAA-TATCAGATTTTGG 1952
| |||| ||||||||| || || ||| ||||| ||||| ||||||| |||||||||||||
Sbjct 1850 TGAAGGTCAGCAACATCCTTCT-GGATGAGAAAATGAA-CCCAAAAATATCAGATTTTGG 1907
Query 1953 GTTGGCTAGGAAGTTTCAAGGAACTCAAA-ATCAAGACAACAGTGGCAGAGTATTT-GGA 2010
|||||| ||| || ||| || || | || |||| || |||| | |||| || | | |||
Sbjct 1908 ATTGGCTCGGATGTATCAGGGGAC-CGAATATCAGGATAACACTCGCAGGGT-TGTAGGA 1965
Query 2011 ACTTTGGGATACATGTCTCCTGAATATGCGTGGACAGGGACATACTCTGAGAAATCTGAC 2070
||| | ||||| |||||||| || ||||| ||||| |||| | ||||||||||||||||
Sbjct 1966 ACTCTAGGATATATGTCTCCAGAGTATGCATGGACTGGGATGTTCTCTGAGAAATCTGAC 2025
Query 2071 ATTTATAGCTTTGGGGTTTTGATGCT-GAAAATCATCAGCGGGAAAGA-GATATCGAGCT 2128
|| || ||||| || ||| | ||| | |||| ||||||| || | ||| ||| || || |
Sbjct 2026 ATCTACAGCTTCGGAGTTCTAATGTTAGAAA-TCATCAGTGG-AGAGAAGATCTCAAGAT 2083
Query 2129 TTAGCCATGG-GAAAGA-GGAAAAAACCCTTGTTGCATATGCATGGGAATCATGGAGC-G 2185
| ||| |||| | | || ||||||| ||||| |||||||||| |||||||| ||| | |
Sbjct 2084 TCAGCTATGGCGTA-GAAGGAAAAA-CCCTTATTGCATATGCGTGGGAATCTTGGT-CTG 2140
Query 2186 AA-ACCGGAGGAGTGGATCTACTGGATCAAGA-CATTGATGTTTTA-G--ATTCAGTT-G 2239
|| || | |||| | ||||| |||| ||||| | ||| || || | | | || || |
Sbjct 2141 AATACAG-AGGAATTGATCTTTTGGACCAAGATC-TTGCTGATTCATGTCACCCA-TTAG 2197
Query 2240 AAGCAGTGATGAGATGTGTTCAGATAGGCTTGCTCTGTGTTCAACACCAAGCAATG--GA 2297
||| | | ||||||| |||| || |||||||||||||| ||||||||| | || ||
Sbjct 2198 AAGTTG-G--GAGATGTATTCAAATCGGCTTGCTCTGTGTACAACACCAACC--TGCAGA 2252
Query 2298 CAGACCAAACATCAAACAAGCTG-TGTCAATGCTGACGTCAACAATG-GATCTTCCAA-A 2354
|||||| |||| || || || || | ||||| || ||||| | ||||||||| |
Sbjct 2253 CAGACCCAACA-CACTTGAGTTGCTGGCTATGCTCACCACAACA-TCAGATCTTCCATCA 2310
Query 2355 GCCAAAACAACC 2366
|||||||||||
Sbjct 2311 -CCAAAACAACC 2321
> AT1G61400.1 | Symbols: | S-locus lectin protein kinase family
protein | chr1:22654596-22657774 REVERSE LENGTH=2502
Length=2502
Score = 534 bits (289), Expect = 1e-150
Identities = 1031/1369 (75%), Gaps = 131/1369 (10%)
Strand=Plus/Plus
Query 1071 TGTTGCCAATATTAAGCCTCCAGA-TTCTTACGAATTAAC-AAGCTT-TGGT-GATGCAG 1126
|||| |||| || ||||||||||| || ||||||| | || || || | || ||||| |
Sbjct 1071 TGTTCCCAACATAAAGCCTCCAGACTT-TTACGAA-T-ACGCAGATTCT-GTGGATGCGG 1126
Query 1127 AACAATGCC-ATAAAGGA-TGTCTCCGCAACTGTTCTTGCTTGGCCTTTGCCTATATTAA 1184
|| |||||| | ||| | || ||| ||| ||||||||||||||||| || ||||||
Sbjct 1127 AAGAATGCCAACAAA--ATTGCCTCAACAATTGTTCTTGCTTGGCCTTCGCTTATATTCC 1184
Query 1185 TAAAATTGGATGCTTGGTGTGGAACCAGGAGCTATTGGACATGGTTCAGTTTACTGAAGA 1244
| ||| || ||||| |||||| | |||| ||| |||||| ||||| ||| ||| ||
Sbjct 1185 TGGAATAGGGTGCTTAATGTGGAGCAAGGACCTAATGGACACAGTTCAATTTGCTGCAGG 1244
Query 1245 AGGAGAGTTTCTTTCCATCCGTCTTGCATGTTCTGAGTTAG-C-TAGAGGCAAGCG-AAT 1301
|||||| |||||||||| ||||||||| |||||||| ||| | || | ||||| ||
Sbjct 1245 AGGAGAACTTCTTTCCATTCGTCTTGCACGTTCTGAGCTAGACGTA-A-ATAAGCGCAA- 1301
Query 1302 CAAGATCATCGCTGTTAGCGCTA-TTAGCCTTTGTGTGTTTT-TTATCTTGGTGC-TTGC 1358
|||| |||| || || | | | |||||| | |||| | ||||||| || || |
Sbjct 1302 GAAGACCATCATTGCTATTAC-AGTGAGCCTTACCCT-TTTTGTGATCTTGG-GCTTTAC 1358
Query 1359 TGCATTTGGGTGT-TGGAGATACAGAGTGAAACAAAATGGTGAAGCTCGTGTAGCCATGG 1417
||| ||| ||| | |||||| ||||||| ||||||| | |||| | |
Sbjct 1359 TGCGTTT-GGTTTCTGGAGACGCAGAGTGGAACAAAA---T---GCTC---T-----T-- 1401
Query 1418 ATATTTCAGAAGATTCTTGGAAGAATGGTTTGCAATCACATGATGTCTCAGGTTC-A-AA 1475
||| ||||||||| | |||| ||||| | ||||| |||| || ||| |||| || | ||
Sbjct 1402 ATA--TCAGAAGATGCATGGAGGAATGATCTGCAAACACAAGACGTCCCAGG-TCTAGAA 1458
Query 1476 TTTCTTTGAGATGCATACCATACAAGCAGCGACCGATAATTTCAG-CGTGTCAAATC-AA 1533
| | ||||||||| ||||||||||| | || ||| |||||||||| | | ||||| | ||
Sbjct 1459 TAT-TTTGAGATGAATACCATACAAACTGCCACCAATAATTTCAGTC-TATCAAA-CAAA 1515
Query 1534 CTCGGTCAAGGTGGATTTAGAACAGTTTATAAGGGAAAGCTAAAAGATGGGAA-AGAAAT 1592
|||||||| ||||||||| | | | | | ||||| || ||||| |||| |||||
Sbjct 1516 CTCGGTCATGGTGGATTT-G----G--T-TCA-GGAAAACTGCAAGAT-GGAAGGGAAAT 1565
Query 1593 AGCTATAAAACGTCTTTCTAACAGCTCTGGAG-AGGGCACAGAGGAATTCATGAACGAAT 1651
|| ||||||| ||||||| ||||||| ||| |||||| | |||| |||||||| |||
Sbjct 1566 TGCGGTAAAACGCCTTTCTAGCAGCTCT-GAGCAGGGCAAACAGGAGTTCATGAATGAAA 1624
Query 1652 TAAAACTCATCTCAAAACTACAACACAGAAACTTGGTTCGGCTTTTAGGATATTGTATTG 1711
|| ||| || |||||||| |||||||||||||| || ||| |||| |||| || | |
Sbjct 1625 TAGTACTGATATCAAAACTCCAACACAGAAACTTAGTCCGGGTTTTGGGATGCTGCGTCG 1684
Query 1712 AAGGAGA-AGAGAAGCTATTGATTTATGAGTTTATGGTCAACAAAAGCCTTGACACTTTT 1770
||||| | |||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct 1685 AAGGA-ACAGAGAAGCTATTGATTTATGAGTTTATGAAAAACAAAAGCCTTGATACTTTT 1743
Query 1771 CTCTTCG-----A-----T-TT---GA--AGA---AGAA----G-CTGGAGATTGATTGG 1806
|||| | | | || | ||| | || | || ||||| ||||||
Sbjct 1744 GTCTTTGTTTTTACACGGTGTTTTTGCTTAGATTCAAAAAAAAGGCTTGAGATAGATTGG 1803
Query 1807 CCTAAGAGATTCAATATCATTCAAGGTATTGCTCGTGGACTTCTCTATCTCCATCGCGAC 1866
|| |||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct 1804 CCAAAGAGATTTGATATCATTCAAGGTATTGCACGTGGACTTCTCTATCTCCATCGTGAC 1863
Query 1867 TCATTCCTCAGAGTTGTACATCGCGATCTAAAGGCCAGCAACATTCT-CTTGGACGAGAA 1925
||| ||||||| | | || || || || |||| |||||||||||| || |||||||||
Sbjct 1864 TCACGCCTCAGAATAATTCACCGAGACCTGAAGGTCAGCAACATTCTTCT-GGACGAGAA 1922
Query 1926 GATGAATCCC-AAAATATCAGATTTTGGGTTGGCTAGGAAGTTTCAAGGAACTCAAA-AT 1983
||||| ||| |||||||||||||||||||||||| ||| |||||| ||||| | || ||
Sbjct 1923 AATGAA-CCCGAAAATATCAGATTTTGGGTTGGCTCGGATGTTTCATGGAAC-CGAATAT 1980
Query 1984 CAAGACAACAGTGGCAGAGTATTT-GGAACTTTGGGATACATGTCTCCTGAATATGCGTG 2042
|| || || | | |||| || | | |||||| | || || ||||||||||| ||||| ||
Sbjct 1981 CAGGATAAAACTCGCAGGGT-TGTCGGAACTCTAGGTTATATGTCTCCTGAGTATGCATG 2039
Query 2043 GACAGG-GACATACTCTGAGAAATCTGACATTTATAGCTTTGGGGTTTTGA-TGCT-GAA 2099
| | || | || |||||||||||| ||||| || ||||| || ||| | | |||| |||
Sbjct 2040 GGCTGGAGT-ATTCTCTGAGAAATCAGACATCTACAGCTTCGGAGTTCT-ACTGCTAGAA 2097
Query 2100 AATCATCAGCGGGAAAGA-GATATCGAGCTTTAGCCATGG-GAAAGA-GGAAAAAACCCT 2156
| |||||||||| | ||| ||| ||||| || ||| |||| ||| || ||||||| | ||
Sbjct 2098 A-TCATCAGCGG-AGAGAAGATCTCGAGGTTCAGCTATGGCGAA-GAAGGAAAAA-CACT 2153
Query 2157 TGTTGCATATGCATGGGAATCATGGAGCGAAACCGGAGGAGTGGATCTACTGGATCAAGA 2216
| |||||||||||||||||| ||| | | | || ||||||| |||| |||| ||||
Sbjct 2154 TCTTGCATATGCATGGGAATGTTGGTGTGGAGCCCGAGGAGTTAATCTTTTGGACCAAGC 2213
Query 2217 -CATTGATG-TT-TTAG--ATTCAGT-TGAAGCAGTGATGAGATGTGTTCAGATAGGCTT 2270
| ||| || || || | | || | ||||| | || | | ||||| ||||| || ||
Sbjct 2214 TC-TTGGTGATTCTT-GTCACCCA-TATGAAGTTG-GAAG-G-TGTGTCCAGATTGGTTT 2267
Query 2271 GCTCTGTGTTCAACACCAAGCAATG--GACAGACCAAACATCAAACAAGCTG-TGTCAAT 2327
||| ||||||||| |||| || || ||||||||||||| || || || | || ||
Sbjct 2268 GCTTTGTGTTCAATACCA-GCC-TGCAGACAGACCAAACA-CACTTGAGTTGCTTTCTAT 2324
Query 2328 GCTGACGTCAACAATG-GATCTTCCAAAGCCAAAACAACCTATTTTTGT 2375
||| || ||||| | |||||||| |||||||||||||| |||||
Sbjct 2325 GCTTACCACAACA-TCAGATCTTCCTCTGCCAAAACAACCTACATTTGT 2372
> AT2G48010.1 | Symbols: RKF3 | receptor-like kinase in in flowers
3 | chr2:19641377-19643491 FORWARD LENGTH=2115
Length=2115
Score = 52.8 bits (28), Expect = 2e-05
Identities = 28/28 (100%), Gaps = 0/28 (0%)
Strand=Plus/Plus
Query 1897 AAGGCCAGCAACATTCTCTTGGACGAGA 1924
||||||||||||||||||||||||||||
Sbjct 1328 AAGGCCAGCAACATTCTCTTGGACGAGA 1355
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 122507674806
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5