BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg910892
Length=822
Score E
Sequences producing significant alignments: (Bits) Value
AT1G11360.1 | Symbols: | Adenine nucleotide alpha hydrolases-l... 1279 0.0
> AT1G11360.1 | Symbols: | Adenine nucleotide alpha hydrolases-like
superfamily protein | chr1:3821443-3823088 REVERSE LENGTH=1278
Length=1278
Score = 1279 bits (692), Expect = 0.0
Identities = 779/822 (95%), Gaps = 2/822 (0%)
Strand=Plus/Plus
Query 1 ATGACTTCTCCGGGAAAATCTCCGAGATCCGACCGCAAATCACCGACGGTTGTCACCGTG 60
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 190 ATGACTTCTCCGGGAAAATCTCCGAGATCCGACCGGAAATCACCGACGGTTGTCACCGTC 249
Query 61 CAGCCGTCGTCTCCCAGATTCCCGATCGGCACACCTACTGCTGGAGCTCAACGTAAGATC 120
|||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 250 CAGCCGTCTTCTCCCAGATTCCCGATCAGCACACCTACTGCTGGAGCTCAACGTAAGATC 309
Query 121 GGGATCGCTGTCGATCTTAGCGACGAGAGTGCGTACGCAGTTCAATGGGCTGTTCAGAAC 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 310 GGGATCGCTGTCGATCTAAGCGACGAGAGTGCGTACGCAGTTCAATGGGCTGTTCAGAAC 369
Query 181 TATCTCCGATCAGGTGACGCCGTCGTTCTCCTCCACGTTCAACCGACAAGTGTACTTTAC 240
||||||||||||||||||||||| |||||||| || ||||||||||| ||||||||||||
Sbjct 370 TATCTCCGATCAGGTGACGCCGTTGTTCTCCTTCATGTTCAACCGACGAGTGTACTTTAC 429
Query 241 GGTGCCGATTGGGGCGCCATTGACCTGTCGCCGCAGTGGGATCCGGAGAACGAAGAGTCT 300
|| |||||||||||||| || || ||||||||||||||||||| | |||||||||||
Sbjct 430 GGCGCCGATTGGGGCGCTATGGATTTGTCGCCGCAGTGGGATCCAAATAACGAAGAGTCG 489
Query 301 CAGAGGAAGCTTGAGGACGATTTCGACATTTTCACGAATAAGAAAGCGAGTGACGTTGCT 360
|||||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||
Sbjct 490 CAGAGGAAGCTTGAGGACGATTTCGACATTGTCACTAATAAGAAAGCGAGCGACGTTGCT 549
Query 361 CAGCCTTTGGTTGAGGCGGATATTCCGTTTAAGATTCACATCGTGAAGGATCACGATATG 420
||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||||
Sbjct 550 CAGCCTTTGGTTGAGGCGGATATTCCGTTTAAGATCCATATCGTCAAGGATCACGATATG 609
Query 421 AAGGAGAGGCTTTGTTTGGAGGTGGAGAGGTTAGGGCTAAGTACTTTGATTATGGGTAGC 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 610 AAGGAGAGGCTTTGTTTGGAGGTGGAGAGGTTAGGGCTAAGTACTTTGATTATGGGTAGT 669
Query 481 AGAGGATTTGGTGCTACGAAGAGGAGCAGCAAAGGGAGGTTAGGGAGTGTTAGTGATTAC 540
|||||||||||||||||||||||||| || |||||||| ||||||||||| |||||||||
Sbjct 670 AGAGGATTTGGTGCTACGAAGAGGAGTAGTAAAGGGAGATTAGGGAGTGTCAGTGATTAC 729
Query 541 TCAGTTCACCATTGTGCTTGTCCGGTGGTTGTTGTTAGATTTCCTGATGATAAGGATGGA 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 730 TCAGTTCACCATTGTGCTTGTCCGGTGGTTGTTGTTAGATTTCCTGATGATAAGGATGGA 789
Query 601 GAAGATGAGAAATCTGGCGAAAGTGGTGGGGAGAATCTGGTGGAAAGTGATAAACTTCAT 660
|||||||||||||| ||||| |||||||||||||||||| |||| |||||||||||||||
Sbjct 790 GAAGATGAGAAATCCGGCGACAGTGGTGGGGAGAATCTGATGGACAGTGATAAACTTCAT 849
Query 661 ACAGTGCCTGAGGTGGCTGAGGAAGAGGGAGACAAGGATGAGTACCATGATGCTTCGGAT 720
|||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct 850 ACAGTGCCTGAGGTGGCTGAAGAAGAGGGAGATAAGGATGAGTACCATGATGCTTCGGAT 909
Query 721 AAGCAGCAGCAGCATCAAGCTTCCATGTTGCAGAAGGAGACCTCCCTAAGGAGACATAGA 780
|||||| ||||||| | |||| |||||||||||||||||||||||||||||||| ||||
Sbjct 910 AAGCAGTAGCAGCA--AGGCTTTCATGTTGCAGAAGGAGACCTCCCTAAGGAGACTTAGA 967
Query 781 AGGAAAAGAAAGCGTTCCTATGCCCTTGGTTTGTGTTCTTGA 822
| ||||||||||||||||| ||||||||||||||||||||||
Sbjct 968 AAGAAAAGAAAGCGTTCCTTTGCCCTTGGTTTGTGTTCTTGA 1009
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 40036615159
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5