BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg911114 Length=564 Score E Sequences producing significant alignments: (Bits) Value AT1G59970.1 | Symbols: | Matrixin family protein | chr1:220735... 462 1e-129 > AT1G59970.1 | Symbols: | Matrixin family protein | chr1:22073534-22074876 FORWARD LENGTH=1343 Length=1343 Score = 462 bits (250), Expect = 1e-129 Identities = 286/304 (94%), Gaps = 0/304 (0%) Strand=Plus/Plus Query 220 GTGACTCCGTTGAATTTCACGCGCTCTGAGTCTCTCCTCGGAGCTGATATAGTGATCGGA 279 ||||||||||||||||||||||||||||||||| ||||| | || ||||||||||||||| Sbjct 626 GTGACTCCGTTGAATTTCACGCGCTCTGAGTCTATCCTCCGTGCGGATATAGTGATCGGA 685 Query 280 TTTTTCTCCGGTGAACATGGAGATGGAGAGCCGTTTGATGGAGCTATGGGGACATTAGCG 339 |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct 686 TTTTTCTCCGGTGAACATGGTGATGGAGAGCCGTTTGATGGAGCTATGGGAACATTAGCG 745 Query 340 CACGCTTCATCTCCTCCTACGGGGATGTTACATTTAGACGGTGATGAGGATTGGTTGATC 399 || ||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 746 CATGCTTCTTCGCCTCCTACGGGGATGTTACATTTAGACGGTGATGAGGATTGGTTGATC 805 Query 400 TCTAACGGTGAAATTAGCCGTCGGGTTTTACCGGTGACGTCGGTGGTGGATCTTGAATCG 459 ||||||||||||||||| |||||| | |||||||||||| |||||||||||||||||||| Sbjct 806 TCTAACGGTGAAATTAGTCGTCGGATATTACCGGTGACGACGGTGGTGGATCTTGAATCG 865 Query 460 GTGGCGGTTCATGAGATCGGACATCTTTTAGGGTTAGGTCACTCGTCGGTGGAAGATGCG 519 ||||| ||||||||||| || |||||||||||| ||||||| |||||||||||||||||| Sbjct 866 GTGGCTGTTCATGAGATTGGTCATCTTTTAGGGCTAGGTCATTCGTCGGTGGAAGATGCG 925 Query 520 ATTA 523 |||| Sbjct 926 ATTA 929 Score = 278 bits (150), Expect = 5e-74 Identities = 188/206 (91%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 19 TCGACTCTACGGCAAATCGTTAAACCGAGATGCGGGAATCCGGATACGATCGACGGAGTT 78 |||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||| Sbjct 392 TCGACTCTCCGGCAAATCGTTAAACCGAGATGCGGGAATCCGGATTTGATCGACGGGGTT 451 Query 79 TCGGAGATGAACGGTGG-AAGAAAGCTTCGTACGAC-GAAGTGGTACTCGTTTTTCCCCG 136 ||||||||||||||||| |||| | || |||||||| | || |||||||||||||||| Sbjct 452 TCGGAGATGAACGGTGGTAAGATA-CTCCGTACGACTG-AGAAATACTCGTTTTTCCCCG 509 Query 137 GGAAGCCACGGTGGCCGAAACGGAAACGAGATCTGACTTACGCGTTTGTGCCGCAGAACA 196 |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| | Sbjct 510 GGAAGCCACGGTGGCCGAAACGGAAACGAGATCTGACTTATGCGTTTGCGCCGCAGAATA 569 Query 197 ATTTAACCGACGATGTTAAACGCGTG 222 ||||||| ||||| |||||||||||| Sbjct 570 ATTTAACAGACGAGGTTAAACGCGTG 595 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 27076205233 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5