BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg911139
Length=2049
Score E
Sequences producing significant alignments: (Bits) Value
AT1G13500.1 | Symbols: | Protein of unknown function (DUF1262)... 1321 0.0
AT1G13510.1 | Symbols: | Protein of unknown function (DUF1262)... 1194 0.0
AT1G13490.1 | Symbols: | Protein of unknown function (DUF1262)... 1160 0.0
AT1G13530.1 | Symbols: | Protein of unknown function (DUF1262)... 1107 0.0
AT1G13540.1 | Symbols: | Protein of unknown function (DUF1262)... 994 0.0
AT1G13520.1 | Symbols: | Protein of unknown function (DUF1262)... 255 9e-67
AT1G13470.1 | Symbols: | Protein of unknown function (DUF1262)... 250 4e-65
> AT1G13500.1 | Symbols: | Protein of unknown function (DUF1262)
| chr1:4627789-4629169 REVERSE LENGTH=1161
Length=1161
Score = 1321 bits (715), Expect = 0.0
Identities = 902/992 (91%), Gaps = 14/992 (1%)
Strand=Plus/Plus
Query 1068 TCCTCAGAACACAAAAGTCACT-GTCAGA-TTCAAAGTCGGAAAGGCTGTCTTTCTTGAC 1125
|||||||||||||| ||||| | |||| | |||| |||||| ||| ||| |||||||
Sbjct 174 TCCTCAGAACACAAGAGTCA-TCGTCAAACGCCAAA-TCGGAACTGCTCTCTATCTTGAC 231
Query 1126 CCGGTCGCGTTCATCCCCGTTGTTCATCAACCACCTTCATCTAATCTTTACTACGTTATA 1185
||||||||||||||||||||| ||||||| |||||||| || ||||||||||| ||||||
Sbjct 232 CCGGTCGCGTTCATCCCCGTTCTTCATCAGCCACCTTCCTCCAATCTTTACTATGTTATA 291
Query 1186 AGGCAAAGCGGGAATCACATAGGTGAAGCATGTGTTAGTGCAAAAGAAGGGGACAGAGCT 1245
||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 292 AGGGGAAGCGGGAAACACACAGGTGAAGCATGTGTTAGTGCAAAAGAAGGGGACAGAGCT 351
Query 1246 TCTTGTTGCATGTGCTTTACTTATATGCCTGATGCTGAACCAAGGCCTCTAGATCCTTTT 1305
||||||||| | |||||||||||||| ||||| |||| ||||||||||| |||||||||
Sbjct 352 TCTTGTTGCTTTTGCTTTACTTATATCCCTGAGGCTGTTCCAAGGCCTCTGGATCCTTTT 411
Query 1306 GACATAAACCAACAATTTGAGATCCATCAAAGTGGATCATCAACCCAGAAGTTCTTTGCT 1365
|||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||
Sbjct 412 GACATAAACCAACAATTTGAGATCCATCAAGGAAGATCATCAACCAAGAAGTTCTTTGCT 471
Query 1366 ACATCTGTTGCTTCAGACGGAATACCACCTCAGTTCCTGACGAAAAAAGGTTGGGT-GGT 1424
||||||||||||||||| || |||||||||||||||||||||| |||||||| ||| |||
Sbjct 472 ACATCTGTTGCTTCAGATGGGATACCACCTCAGTTCCTGACGAGAAAAGGTT-GGTCGGT 530
Query 1425 TATTTCCT-TG---CC-TA-TCGAAGAAAATGCTTTGATTGATGATGCAAAGGGAATAGT 1478
||||| || | || | ||||||| ||| |||||||||||||||||| || |||||
Sbjct 531 TATTTTCTCGGCCCCCGAAGTCGAAGACTATGGTTTGATTGATGATGCAAAAGGCATAGT 590
Query 1479 TGACGCAAAGCTGCGCTATGAGTTTCCTGATTTCGATAAGAGCGTTGTAGTTGGGAAATG 1538
|||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||
Sbjct 591 TGACGCAAAGCTGCGCTATGAGCTTCCTGATTTAGATAACAGCGTTGTAGTTGGGAAATG 650
Query 1539 GTATGTTCCCTTCTTATTTGTTAAGGATGGTGATGCAAAAGATCAGATGAATAAATCAAT 1598
||||||||| ||||| ||||||||||| ||||||||||||||||||||| |||| |||||
Sbjct 651 GTATGTTCCGTTCTTGTTTGTTAAGGAAGGTGATGCAAAAGATCAGATGTATAAGTCAAT 710
Query 1599 GTATTATAGTATGACGCTTCAGCAAAGATTTGAAGAGGTTTTCTTCTGTGAAAACGTTGA 1658
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 711 GTATTATAGTATGACGCTTCAGCAAAGATTTGAAGAGGTTTTCTTCTGTGAAAACGTTGG 770
Query 1659 CAACAATAAATATCGTGAGGTTGTAGTTGATGTGGAGGTAGAAACAGAAGTGGTCAAGCT 1718
|||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 771 CAACAATAAACGTTTTGAGGTTGTAGTTGATGTGGAGGTAGAAACAGAAGTGGTCAAGCT 830
Query 1719 TGAAGGAGACAAGATTGCAAGAGAGATAAAAGGTGTGAATTCAGATGGAGTTGTGTGGTT 1778
||||||||| | |||||||||||||| | |||||||||| ||||||||||||||||||||
Sbjct 831 TGAAGGAGAGAGGATTGCAAGAGAGACACAAGGTGTGAACTCAGATGGAGTTGTGTGGTT 890
Query 1779 TAGTGTCTCAGCGACTGATAAGATTGGTCTTGGGTCTGTGGTCTTGGAGAGGATGAAATG 1838
|| || ||||| || ||| ||||| |||||||||||||| ||||| ||||||||||||||
Sbjct 891 TAATGCCTCAGGGAATGAGAAGATAGGTCTTGGGTCTGTTGTCTTAGAGAGGATGAAATG 950
Query 1839 GGAAGAGGAGAGGTTTGGTTGGTCGAACAAAGGCGATGAACTAAGGTCTAGCATTAAGAG 1898
|||||||||||||||||| |||| ||||||||| |||||| ||||||||||||||||||
Sbjct 951 GGAAGAGGAGAGGTTTGGGTGGTTAAACAAAGGCTATGAACAAAGGTCTAGCATTAAGAG 1010
Query 1899 AACTGAGAA-ATTTGAAGACGGTGGACCGCATTGGAAGAGTTATAGATGCTATGTACTGG 1957
|||||| || |||||||| ||||||||| |||||||||||||||||||||||||| |||
Sbjct 1011 AACTGA-AAGATTTGAAGGCGGTGGACCATATTGGAAGAGTTATAGATGCTATGTATTGG 1069
Query 1958 TAGAGAGCTTTGAATTGAAGAGAGCTGATGGGAGTTTGGTATTGACATATGAGTTTAAAC 2017
|||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1070 TAGAGACCTTTGAATTGAAGAGAACTGATGGGAGTTTGGTATTGACATATGAGTTTAAAC 1129
Query 2018 ATGTTGATAAGTTGAAGAGCAAGTGGGATTGA 2049
||||||||||||||||||||||||||||||||
Sbjct 1130 ATGTTGATAAGTTGAAGAGCAAGTGGGATTGA 1161
> AT1G13510.1 | Symbols: | Protein of unknown function (DUF1262)
| chr1:4629203-4630821 REVERSE LENGTH=1533
Length=1533
Score = 1194 bits (646), Expect = 0.0
Identities = 740/785 (94%), Gaps = 8/785 (1%)
Strand=Plus/Plus
Query 285 GAAGCGCCTGCTAGTGGGAAAGAGGAAGACAGAGTCCCCTGCTGCTTTTG--CTAGTTAT 342
|||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 456 GAAGCGCCTGCTAGTGGGAAAGAGGAAGACAGAGTCCCGTGCTGCTTTTGCTCTAGTTAT 515
Query 343 GTTCCTGAAGCCAAACCAAAACAGGTAGATCCTTATGACATGTACCAACAATTCATTATC 402
|||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||
Sbjct 516 GTTCCTGAAGCCAAACCAAAACAGCTAGATCCTTATGACATGTATCAACAATTCATGATC 575
Query 403 CATCAAAAGAAACCATCCTCGCGCTATTACTACGCGACATCTGTTGCGCCTGACGGAGTC 462
|| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 576 CACCAAAAGAAACCATCCTCGCGCTACTACTACGCGACATCTGTTGCGCCTGACGGAGTC 635
Query 463 CCACCATGGTTCCTTAAGAAAAATAAGTGGACAGTTGAATACTCGAGGTTCCAAGACTTT 522
|||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct 636 TCACCATGGTTCCTTAAGAAAAATAAGTGGACAGTCGAATACTCAAGGTTCCAAGACTTT 695
Query 523 GAACTTAGAGATGATGCAAAAGGACTAAACACAGAGTTTCGTACCGAGCTTCTTGGTCTT 582
||||| | |||||||||||||||||||||||||||| ||||||||||||||| ||||||
Sbjct 696 GAACTGAAAGATGATGCAAAAGGACTAAACACAGAGCTTCGTACCGAGCTTCCCGGTCTT 755
Query 583 GGTATGAGTGTTGTGGTTGGGAAGTGGTACGTCCCTTTTATATTTGTGAAGGAAAGAGAC 642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 756 GGTATGAGTGTTGTGGTTGGGAAGTGGTACGTCCCTTTTATATTTGTGAAGGAAAGAGAC 815
Query 643 GTAGAGGATCAGATCAAGAGATCGATGTACTACAGCATGACTCTTGAACAAAGATGGGAA 702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 816 GTAGAGGATCAGATCAAGAGATCGATGTACTACAGCATGACTCTTGAACAAAGATGGGAA 875
Query 703 GAAGTTTTCTTTTATGAGAACGATAAAAGC-GAAAACCGTGATGTTGTAGTTGATGTGGA 761
|||||||||| ||||||||| ||||||||| |||| | ||||||| |||||||||| ||
Sbjct 876 GAAGTTTTCTCTTATGAGAAGGATAAAAGCCGAAA-CTATGATGTTTTAGTTGATGTAGA 934
Query 762 GTTAGATACTGAAGTTGTTAAGGTTGATGGACAAGAGATTGCAAGAGGTGTTGAAGCAAA 821
|||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||
Sbjct 935 GTTAGATACTGAAGTTGTTAAGGTTGATGGACAAGAGATTTCAAGAGGTGTGGAAGCAAA 994
Query 822 TGGGTTTGTTTGGTTTGGGGTTGGAGAACAAAA-GATCGGTTTAGGATCAGTTGTTGTTG 880
||||||||| ||||||| ||||||||| ||||| ||| ||||||||||||||||||||||
Sbjct 995 TGGGTTTGTCTGGTTTGCGGTTGGAGA-CAAAAAGATTGGTTTAGGATCAGTTGTTGTTG 1053
Query 881 AGAGGATGAAATGGGAAGAAGAGAGATTCGGGTGGACAGGCAAAGGCGACAAGGAGCGAT 940
||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct 1054 AGAGGATGAAATGGGAAGAAGAGAGATTCGGGTGGACTGGCAAAGGCGACAATGAGCGAT 1113
Query 941 CAATGACAGTTGAGAGATTGGAGAAATCAACAGATGGTAGCTT-TTGGAAGAGTTATCAT 999
||||| || | ||||||||||||||||||||||||||||||| ||| |||| | ||||
Sbjct 1114 CAATGGTAGCTAAGAGATTGGAGAAATCAACAGATGGTAGCTTGTTG-AAGAATCGTCAT 1172
Query 1000 TGTTATGTTCTGATAGAGAGCTTTGTCTTGAAGAGAATGGATAAGAGTTTGGTCTTAACA 1059
|||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct 1173 TGTTATGTTCTGGTAGAGTGCTTTGTCTTGAAGAGAATGGATGAGAGTTTGGTCTTAACA 1232
Query 1060 TATGA 1064
|||||
Sbjct 1233 TATGA 1237
Score = 429 bits (232), Expect = 5e-119
Identities = 266/283 (94%), Gaps = 0/283 (0%)
Strand=Plus/Plus
Query 1 ATGTATGTTACAAGGCGTTTGTCAGAGTACCAGAGAAATCCATCAGAGCTAACACAGCCT 60
||||||||||| ||| |||||||||||||||||||||||||| ||||||||| |||||||
Sbjct 135 ATGTATGTTACGAGGTGTTTGTCAGAGTACCAGAGAAATCCAGCAGAGCTAAGACAGCCT 194
Query 61 CCTCCTGATGGTCCAAACTCTGGAATTTTGGTAATCCAAGACCAACACTCACAAACACAT 120
|||||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| |
Sbjct 195 CCTCCTGAGGGTCCAAACTCTGGAATTTTGGTAATACAAGACCAACACTCACAGACACGT 254
Query 121 CCATGCTGCTTCGGCTTGTGTTTGGTCGTCGACTCTTTTCTAAGTGGTTTGCCCTTGCCG 180
||||| |||||||||||||||||||| || ||||| | ||||||||||||||||||||||
Sbjct 255 CCATGTTGCTTCGGCTTGTGTTTGGTTGTGGACTCGTATCTAAGTGGTTTGCCCTTGCCG 314
Query 181 CAAAATCTTAAGCTCGCAGCCAGATTCAATGCTGGAGAAGATGACGCTACTTGTGACCCA 240
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 315 CAAAATCTTAAGCTAGCAGCCAGATTCAATGCTGGAGAAGATGACGCTACTTGTGACCCA 374
Query 241 GTTCTGTTCATTCCTGTTCTCGATAAGCCTCTATCTTCAAACT 283
||| | ||||||||||||||| |||||||||||||||||||||
Sbjct 375 GTTGTCTTCATTCCTGTTCTCAATAAGCCTCTATCTTCAAACT 417
> AT1G13490.1 | Symbols: | Protein of unknown function (DUF1262)
| chr1:4624715-4626064 REVERSE LENGTH=1092
Length=1092
Score = 1160 bits (628), Expect = 0.0
Identities = 733/784 (93%), Gaps = 6/784 (1%)
Strand=Plus/Plus
Query 1269 TATGCCTGATGCTGAACCAAGGCCTCTAGATCCTTTTGACATAAACCAACAATTTGAGAT 1328
||| ||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||
Sbjct 312 TATCCCTGATGCTGATCCAAGGCCTCTGGATCCTTTTGACATATACCAACAATTTGAGAT 371
Query 1329 CCATCAAAGTGGATCATCAACCCAGAAGTTCTTTGCTACATCTGTTGCTTCAGACGGAAT 1388
||||||||| |||||||||| ||||||||| ||||||||||||||||||||||| || ||
Sbjct 372 CCATCAAAGAGGATCATCAAACCAGAAGTTTTTTGCTACATCTGTTGCTTCAGAAGGGAT 431
Query 1389 ACCACCTCAGTTCCTGACGAAAAAAGGTTGGGTGGTTATTTCCTTGCCTATCGAAGAAAA 1448
|||||||||||||||||||| |||||||||||||| | |||||||||| |||||||| |
Sbjct 432 ACCACCTCAGTTCCTGACGAGAAAAGGTTGGGTGGCTGCTTCCTTGCCTTTCGAAGAATA 491
Query 1449 TGCTTTGATTGATGATGCAAAGGGAATAGTTGACGCAAAGCTGCGCTATGAGTTTCCTGA 1508
|| ||||||||||||||||||||| ||||||| |||||||| ||||||||| |||||||
Sbjct 492 TGGTTTGATTGATGATGCAAAGGGTGTAGTTGATGCAAAGCTTCGCTATGAGCTTCCTGA 551
Query 1509 TTTCGATAAGAGCGTTGTAGTTGGGAAATGGTATGTTCCCTTCTTATTTGTTAAGG-A-- 1565
||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||| |
Sbjct 552 TTTAGATAAGAGCGTTGTAGTTGGGAAATGGTATGTTCCGTTCTTGTTTGTTAAGGAAGG 611
Query 1566 TGGTGATGCAAAAGATCAGATGAATAAATCAATGTATTATAGTATGACGCTTCAGCAAAG 1625
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 612 TGGTGATGCAAACGATCAGATGAATAAATCAATGTATTATAGTATGACGCTTCAGCAAAG 671
Query 1626 ATTTGAAGAGGTTTTCTTCTGTGAAAACGTTGACAACAATAAATATCGTGAGGTTGTAGT 1685
|||||||||||||||||||||||||||| ||| |||||||||| || ||||||||||||
Sbjct 672 ATTTGAAGAGGTTTTCTTCTGTGAAAACATTGGCAACAATAAACATTTTGAGGTTGTAGT 731
Query 1686 TGATGTGGAGGTAGAAACAGAAGTGGTCAAGCTTGAAGGAGACAAGATTGCAAGAGAGAT 1745
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 732 TGATGTGGAGGTAGAAACAGAAGTGGTTAAGCTTGAAGGAGACAAGATTGCAAGAGAGAC 791
Query 1746 AAAAGGTGTGAATTCAGATGGAGTTGTGTGGTTTAGTGTCTCAGCGACTGATAAGATTGG 1805
|||||||||||| ||||||||||||||||||||||||||||||| |||| | ||||||||
Sbjct 792 AAAAGGTGTGAACTCAGATGGAGTTGTGTGGTTTAGTGTCTCAGGGACTCAGAAGATTGG 851
Query 1806 TCTTGGGTCTGTGGTCTTGGAGAGGATGAAATGGGAAGAGGAGAGGTTTGGTTGGTCGAA 1865
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct 852 TCTTGGGTCTGTGGTCTTGGAGAGGATGAAATGGGAAGAGGAGAGGTTTGGATGGTCAAA 911
Query 1866 CAAAGGCGATGAACTAAGGTCTAGCATTAAGAGAACTGAGAAATTTGAAGACGGTGGACC 1925
|||| |||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 912 GAAAG---ATGAACTAAGGTCTAGCATTAAGAGAACTGAGAAATTTGAAGGTGGTGGACC 968
Query 1926 GCATTGGAAGAGTTATAGATGCTATGTACTGGTAGAGAGCTTTGAATTGAAGAGAGCTGA 1985
||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||
Sbjct 969 ACATTGGAAGAGTTATAGATGCTATGTACTGGTAGAGACCTTTGAACTGAAGAGAACTGA 1028
Query 1986 TGGGAGTTTGGTATTGACATATGAGTTTAAACATGTTGATAAGTTGAAGAGCAAGTGGGA 2045
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1029 TGGGAGTTTGGTATTGACATATGAGTTTAAACATGTTGATAAGTTGAAGAGCAAGTGGGA 1088
Query 2046 TTGA 2049
||||
Sbjct 1089 TTGA 1092
> AT1G13530.1 | Symbols: | Protein of unknown function (DUF1262)
| chr1:4633740-4635129 REVERSE LENGTH=1158
Length=1158
Score = 1107 bits (599), Expect = 0.0
Identities = 834/946 (88%), Gaps = 21/946 (2%)
Strand=Plus/Plus
Query 1113 TGTCTTTCTTGACCCGGTCGCGTTCATCCCCGTTGTTCATCAACCACCTTCATCTAATCT 1172
|||||| |||||| |||||||||||||||||||| |||| || || ||||| || |||||
Sbjct 225 TGTCTTGCTTGACTCGGTCGCGTTCATCCCCGTTCTTCACCAGCCTCCTTCTTCCAATCT 284
Query 1173 TTACTACGTTATAAGGCAAAGCGGGAATCACAT--AGGTGAAGCATGTGTTAGTGCAAAA 1230
||||||||||||||||| ||| ||||| |||| ||| |||||||||||||||||||||
Sbjct 285 TTACTACGTTATAAGGCGAAGAGGGAA--ACATGCAGGAGAAGCATGTGTTAGTGCAAAA 342
Query 1231 GAAGGGGACAGAGCTTCTTGTTGCATGTGCTTTACTTATATGC-CTGATGCTGA-ACCAA 1288
|||| ||||| || |||||||||| | || ||||||||| | | || ||||| | ||||
Sbjct 343 GAAGAGGACAAAGTTTCTTGTTGCCTTTGTTTTACTTATGT-CTCTAATGCT-ACGCCAA 400
Query 1289 GGCCTCTAGATCCTTTTGACATAAACCAACAATTTGAGATCCATCAAAGTGGATCATCAA 1348
||| ||| ||||||||||||||| |||||||||||||||| |||||||| || |||||||
Sbjct 401 GGCTTCTTGATCCTTTTGACATATACCAACAATTTGAGATACATCAAAGAGGCTCATCAA 460
Query 1349 CCCAG-AAGTTCTTT-GCTACATCTGTTGCTTCAGACGGAATACCACCTCAGTTCCTGAC 1406
| | | ||||| ||| |||||||||||||||||||| ||||||||||||| ||||||||
Sbjct 461 CTC-GCAAGTT-TTTCGCTACATCTGTTGCTTCAGATGGAATACCACCTCGGTTCCTGAG 518
Query 1407 GAAAAAAGGTTGGGTGGTT-ATTTCCT-TGCCTAT-CGAAGAAAATGCTTTGATTGATGA 1463
|| |||||| ||| ||| ||| || || || | | |||| ||| ||||||||||||
Sbjct 519 GAGAAAAGGCTGGACCGTTCCTTT-CTCTG-CT-TCCCAAGACTATGGTTTGATTGATGA 575
Query 1464 TGCAAAGGGAATAGTTGACGCAAAGCTGCGCTATGAGTTTCCTGATTTCGATAAGAGCGT 1523
||||||||| ||||||| |||||||||||||||||| |||| ||||||| |||||| ||
Sbjct 576 TGCAAAGGGTGTAGTTGATGCAAAGCTGCGCTATGAGCTTCCCGATTTCGGTAAGAGTGT 635
Query 1524 TGTAGTTGGGAAATGGTATGTTCCCTTCTTATTTGTTAAGGATGGTGATGCAAAAGATCA 1583
|||||||| |||||||||||||| || || ||||| ||||| || ||||| ||||||||
Sbjct 636 AGTAGTTGGAAAATGGTATGTTCCGTTTTTGTTTGTAAAGGAAGGAGATGCTAAAGATCA 695
Query 1584 GATGAATAAATCAATGTATTATAGTATGACGCTTCAGCAAAGATTTGAAGAGGTTTTCTT 1643
|||||| ||||| ||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct 696 GATGAAGAAATCGATGTATTATAGTATGACACTTCACCAAAGATTTGAAGAGGTTTTCTT 755
Query 1644 CTGTGAAAACGTTGACAACAATAAATATCGTGAGGTTGTAGTTGATGTGGAGGTAGAAAC 1703
||| |||||||||||||| || |||| | | |||||| ||||||||||||||||||||||
Sbjct 756 CTGCGAAAACGTTGACAATAA-AAAT-T-GCGAGGTTATAGTTGATGTGGAGGTAGAAAC 812
Query 1704 AGAAGTGGTCAAGCTTGAAGGAGACAAGATTGCAAGAGAGATAAAAGGTGTGAATTCAGA 1763
||||||||| |||||||||||||| || |||| |||||||| ||||||||||||||||||
Sbjct 813 AGAAGTGGTTAAGCTTGAAGGAGAAAATATTGGAAGAGAGACAAAAGGTGTGAATTCAGA 872
Query 1764 TGGAGTTGTGTGGTTTAGTGTCTCAGCGACTGATAAGATTGGTCTTGGGTCTGTGGTCTT 1823
||||||||| |||||| ||||||||| |||| | ||||| ||| ||||||||||||||||
Sbjct 873 TGGAGTTGTCTGGTTTGGTGTCTCAGAGACTCAGAAGATAGGTATTGGGTCTGTGGTCTT 932
Query 1824 GGAGAGGATGAAATGGGAAGAGGAGAGGTTTGGTTGGTCGAACAAAGGCGATGAACTAAG 1883
||||||||||||||||||||| ||||||||||| |||||||| |||||| |||||||||
Sbjct 933 GGAGAGGATGAAATGGGAAGAAGAGAGGTTTGGGTGGTCGAAGAAAGGCAATGAACTAAA 992
Query 1884 GTCTAGCATTAAGAGAACTGAGAAATTTGAAGACGGTGGACCGCATTGGAAGAGTTATAG 1943
|||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||||
Sbjct 993 GTCTAGCATTAAGAGAACTGAGAAATTTGAAGGCGGTGGACCACAATGGAAGAGTTATAG 1052
Query 1944 ATGCTATGTACTGGTAGAGAGCTTTGAATTGAAGAGAGCTGATGGGAGTTTGGTATTGAC 2003
|||||||||||||||||||| ||||||| |||||| | ||||||||||||||||||||||
Sbjct 1053 ATGCTATGTACTGGTAGAGACCTTTGAACTGAAGAAAACTGATGGGAGTTTGGTATTGAC 1112
Query 2004 ATATGAGTTTAAACATGTTGATAAGTTGAAGAGCAAGTGGGATTGA 2049
|||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct 1113 GTATGAGTTTAGACATGTTGATAAGTTGAAGAGTAAGTGGGATTGA 1158
> AT1G13540.1 | Symbols: | Protein of unknown function (DUF1262)
| chr1:4635463-4636805 REVERSE LENGTH=1254
Length=1254
Score = 994 bits (538), Expect = 0.0
Identities = 709/790 (90%), Gaps = 18/790 (2%)
Strand=Plus/Plus
Query 285 GAAGCGCCTGCTAGTGGGAAAGAGGAAGACAGAGTCCCCTGCTGCTTTTG--CTAGTTAT 342
|||||| ||| |||| |||||||| || | |||| ||||||||||||| |||||| |
Sbjct 422 GAAGCGTCTGGAAGTGCAAAAGAGGACGATATAGTCTCCTGCTGCTTTTGCTCTAGTTTT 481
Query 343 GTTCCTGAAGCCAAACCAAAACAGGTAGATCCTTATGACATGTACCAACAATTCATTATC 402
|||||||||||||||||||||||| ||||||||| |||||||||||||||||||| |||
Sbjct 482 GTTCCTGAAGCCAAACCAAAACAGTTAGATCCTTTTGACATGTACCAACAATTCAAGATC 541
Query 403 CATCAAAAGAAACCATCCTCGCGCTATTACTACGCGACATCTGTTGCGCCTGACGGAGTC 462
||||||||| | || |||||||| | ||||||||| |||||||| || |||||||| |||
Sbjct 542 CATCAAAAGGAGCCTTCCTCGCGTTGTTACTACGCAACATCTGTCGCTCCTGACGGGGTC 601
Query 463 CCACCATGGTTCCTTAAGAAAAATA-AGTGGACAGTTGAATACTCGAGGTTCCAAGACTT 521
||||||||||| || | |||||| | ||||||| ||||||||||||||||||||||||||
Sbjct 602 CCACCATGGTTTCTGAGGAAAAA-AGAGTGGACGGTTGAATACTCGAGGTTCCAAGACTT 660
Query 522 TGAACTTAGAGATGATGCAAAAGGACTAAACACAGAGTTTCGTACCGAGCTTCTTGGTCT 581
|||||| |||||||||||||||||||| | ||||||| ||||||| ||||||| | |||
Sbjct 661 TGAACTGAGAGATGATGCAAAAGGACTCATCACAGAGCTTCGTACTGAGCTTCCTCTTCT 720
Query 582 TGGTATGAGTGTTGTGGTTGGGAAGTGGTACGTCCCTTTTATATTTGTGAAGGAAAGAGA 641
||||||||| |||||||||||||||||| |||||||| ||||| ||||| ||||||||
Sbjct 721 TGGTATGAGCACTGTGGTTGGGAAGTGGTATGTCCCTTTCATATTCGTGAAAGAAAGAGA 780
Query 642 CGTAGAGGATCAGATCAAGAGA-TCGATGTACTACAGCATGACTCTTGAACAAAGATGGG 700
||| ||||||||||||||| | |||||||| |||||||||||||||||||||||||||
Sbjct 781 GGTAAAGGATCAGATCAAGA-ATTCGATGTATTACAGCATGACTCTTGAACAAAGATGGA 839
Query 701 AAGAAG-TTTTCTT-TTATGAGAACGATAAAAGCGAAAACCGTGATGTTGTAGTTGATGT 758
||| || |||| || | |||||||||| |||||||| |||||||||||||| ||||||||
Sbjct 840 AAG-AGCTTTT-TTCTGATGAGAACGACAAAAGCGAGAACCGTGATGTTGTCGTTGATGT 897
Query 759 -GGAGTTAGATACTGAAGTTGTTAAGGTTGATGGACAAGA-GATTGCAAGAGGTGTTGAA 816
| || |||| || |||||||||||| |||| |||||| | ||||| ||||||| | |||
Sbjct 898 AGAAG-TAGAAACAGAAGTTGTTAAGCTTGAGGGACAA-ATGATTGAAAGAGGTCTGGAA 955
Query 817 GCAAATGGGTTTGTTTGGTTTGGGGTTGGAGAAC-AAAAGATCGGTTTAGGATCAGTTGT 875
|||||||||||||| |||||||||||||||| || |||||||||||||||||||||||||
Sbjct 956 GCAAATGGGTTTGTCTGGTTTGGGGTTGGAG-ACAAAAAGATCGGTTTAGGATCAGTTGT 1014
Query 876 TGTTGAGAGGATGAAATGGGAAGAAGAGAGATTCGGGTGGACAGGCAAAGGCGACAAGGA 935
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1015 TGTTGAGAGGATGAAATGGGAAGAAGAGAGATTCGGGTGGACAGGCAAAGGCGACAATGA 1074
Query 936 GCGATCAATGACAGTTGAGAGATTGGAGAAATCAACAGATGGTAGCTTTTGGAAG-AGTT 994
|||||||||||||||| ||||||||||||||||||||||||||||| |||||||| | ||
Sbjct 1075 GCGATCAATGACAGTTAAGAGATTGGAGAAATCAACAGATGGTAGCCTTTGGAAGCA-TT 1133
Query 995 ATCATTGTTATGTTCTGATAGAGAGCTTTGTCTTGAAGAGAATGGATAAGAGTTTGGTCT 1054
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1134 ATCATTGTTATGTTCTGATAGAGAGCTTTGTCTTGAAGAGAATGGATGAGAGTTTGGTCT 1193
Query 1055 TAACATATGA 1064
||||||||||
Sbjct 1194 TAACATATGA 1203
Score = 315 bits (170), Expect = 1e-84
Identities = 244/279 (87%), Gaps = 7/279 (3%)
Strand=Plus/Plus
Query 10 ACAAGGCGTTTGTCAGAGTACCAGAGAAATCCATCAGAGCTAACACAGCCTCCTCCTGAT 69
|||||| |||| |||||||||| ||| |||||| |||||||||||||||||||||||||
Sbjct 107 ACAAGGAGTTTCTCAGAGTACCGGAGGAATCCAGCAGAGCTAACACAGCCTCCTCCTGAG 166
Query 70 GGTCCAAACTCTGGAATTTTGGTAATCCAAGACCAACACTCACAAACACAT-C--CATGC 126
|||||||| |||||||||||||||||||||||||||||||||| |||| | ||| |
Sbjct 167 GGTCCAAATTCTGGAATTTTGGTAATCCAAGACCAACACTCACGGACACGGGCTACAT-C 225
Query 127 T-GCTTCGGCTTGTGTTTGGTCGTCGACTCTTTTCTAAGTGGTTTGCCCTTGCCGCAAAA 185
| ||||||||| ||| ||||| || ||||||| ||||||||||||||| ||||| |||||
Sbjct 226 TTGCTTCGGCTCGTGGTTGGTTGTGGACTCTTCTCTAAGTGGTTTGCCATTGCCCCAAAA 285
Query 186 TCTTAAGCTCGCAGCCAGATTCAATGCTGGAGAAGATGAC-GCTACTTGTGACCCAGTTC 244
||||||||| |||| || ||||||| ||||| |||||| || ||| |||||||||||
Sbjct 286 TCTTAAGCTAGCAGTCACATTCAATATTGGAGGTGATGACAGC-ACTCGTGACCCAGTTG 344
Query 245 TGTTCATTCCTGTTCTCGATAAGCCTCTATCTTCAAACT 283
|||||||||||||||| ||||||||||||||||||||||
Sbjct 345 TGTTCATTCCTGTTCTTGATAAGCCTCTATCTTCAAACT 383
> AT1G13520.1 | Symbols: | Protein of unknown function (DUF1262)
| chr1:4631778-4633248 REVERSE LENGTH=1268
Length=1268
Score = 255 bits (138), Expect = 9e-67
Identities = 606/818 (74%), Gaps = 88/818 (11%)
Strand=Plus/Plus
Query 303 AAA-GAGGAAGACAGAGTCCCCTGCTGCTTTTGCT--AGTTATGTTCCTGAAGCCAAACC 359
||| || |||||||||||||||||||||||||||| || ||||||||||||| || ||
Sbjct 364 AAAGGAAGAAGACAGAGTCCCCTGCTGCTTTTGCTTCAGCTATGTTCCTGAAGTTAAGCC 423
Query 360 AAAACAGGTAGATCCTTATGACATGTACCAACAATTC-ATTATCCATCAAAAG-AAACCA 417
| || | | |||||||||||| || || ||||| ||| | |||||||| | ||||||
Sbjct 424 ACAAGAAGCAGATCCTTATGATATATATCAACAGTTCGAGG-TCCATCAAC-GTAAACCA 481
Query 418 TCCTC-GCGCTATTACTAC-GCGACATCTGTTGCGCCTGACGG-AGTCCCACCATG-GTT 473
|| || | |||||||| || || || || ||||| ||| | || | | |||||| | |||
Sbjct 482 TCATCAG-GCTATTAC-ACTGCCACTTCAGTTGCTCCTAATGGGA-TACCACCA-GAGTT 537
Query 474 CCTTAAGAAAAA-TAAGTGGACAGTTGAATACTCGAGGTTCC-AAGACTTTGAACTT-AG 530
|||||||| ||| || ||||| ||||| || |||| |||| ||||||||| || |
Sbjct 538 CCTTAAGAGAAAGTAC-TGGACCGTTGAGTATTCGAA-TTCCCAAGACTTTGGT-TTGAC 594
Query 531 AGATGATGCAAAAGG-ACTAAACAC-AGAGTTTCGTACCGAGCTTCTTG--G-TCTTGG- 584
||||||||||||||| | | ||||| | | ||||| || |||||| | | | |
Sbjct 595 AGATGATGCAAAAGGGA-TCAACACTAC-GCTTCGTTCCAAGCTTCCCAACGATAT-GAA 651
Query 585 TATGAGTGTTGTGGTTGGGAAGTGGTACGTCCCTTTTATATTTGTGAAGGAAAGAGACGT 644
|| ||||||||||| ||||| ||||| || ||||| ||||||||||| |||||||| |
Sbjct 652 TACAAGTGTTGTGGTAGGGAAATGGTATGTTCCTTTCATATTTGTGAAAGAAAGAGATGC 711
Query 645 AGAGGATCAGATCAAGAGATCGATGT-ACTACAGCATGACTCTTGAACAAAGATGGGAAG 703
| | |||||||| ||||| || | | | ||||||||||| ||| |||||||||||||||
Sbjct 712 AAAAGATCAGATTAAGAGCTC-ACCTTATTACAGCATGACGCTTAAACAAAGATGGGAAG 770
Query 704 AAGTTTTCTTTTATGAG-AA-CGATAA--A-AGCGAAAACCGTG-AT-G-TTGTAGTTGA 755
| |||| || ||| | || || ||| | | | |||| | | | | ||||||||||
Sbjct 771 AGGTTTACTC--ATGCGTAAACGTTAACTACAACCAAAAAGGAGGAGAGGTTGTAGTTGA 828
Query 756 TGTGGA-GTTAGATACTGAAGTTGTTAAGGTTGATGGACAAGAGA-T-TG-C-A-AGAG- 808
||| || || ||| || |||| || ||| |||| |||||||| | | | | | ||||
Sbjct 829 TGTTGACGT-AGAAACACAAGTGGTAAAGCTTGAGGGACAAGAAACTATTTCTAGAGAGA 887
Query 809 ---GTGTTGAAGCAAATGGGTTTG-TTT-G-GTTT--GGGGTTG-GAGA-A---CAA-AA 854
||| || | | || |||| ||| | |||| |||| || |||| | ||| ||
Sbjct 888 CAAGTGGTGGTGGATTTG--TTTGGTTTAGTGTTTTAGGGGATGAGAGACAAGACAAGAA 945
Query 855 GATCGGT-TTAGGATCAGTTGTTGTTGAGAGGATGAAATGGGAAGAAGAGAGATTCGGGT 913
||| ||| || || || ||||| || |||||||||||||||||||| || || ||||| |
Sbjct 946 GATAGGTCTTGGG-TCTGTTGTCGTGGAGAGGATGAAATGGGAAGAGGAAAGGTTCGGAT 1004
Query 914 GGACAGGCAAAGGCGACAAGGAGCGATCAATGACAGTTGAGAGATTGGAGAAATCA-ACA 972
|| | ||| || || ||| | | | || || || |||||| |||| || | |
Sbjct 1005 GGTTAAACAACGGTGA-AAG-ATC--T-AA---CA-TTAAGAGATCAGAGAGATTTGA-A 1054
Query 973 GATGG-T-A--GCTTTTGGAAGAGTTATC-ATTGTTATGTTCT-GATAGAGAGCTTTGTC 1026
| || | | || || |||||||||||| || ||| || | | |||||||||||| |
Sbjct 1055 GGCGGGTCATCGCATT-GGAAGAGTTATCGAT-GTT-TGGTATTGATAGAGAGCTTCGAA 1111
Query 1027 TTGAAGAGAATGGATAAGAGTTTGGTCTTAACATATGA 1064
||||||||||||||| ||||||||| || ||||||||
Sbjct 1112 TTGAAGAGAATGGATGGGAGTTTGGTGTTGACATATGA 1149
> AT1G13470.1 | Symbols: | Protein of unknown function (DUF1262)
| chr1:4620228-4621580 REVERSE LENGTH=1272
Length=1272
Score = 250 bits (135), Expect = 4e-65
Identities = 425/558 (76%), Gaps = 48/558 (9%)
Strand=Plus/Plus
Query 1506 TGATTTCGATA-AGAGCGTTGTAGTTGGGAAATGGTATGTTCCC-TTCTTATTTGTTAAG 1563
|||||| ||| | |||||||| || || |||||||||| |||| ||| ||||||| |||
Sbjct 644 TGATTTTAATACA-AGCGTTGTGGTAGGAAAATGGTATG-TCCCTTTCATATTTGTGAAG 701
Query 1564 GATGGTGATGCAAAAGATCAGATGAATAAATCA-ATGTATTATAGTATGACGCTTC-AGC 1621
|| || ||||||| |||||| | || | ||| | ||||| || |||| |||| | |
Sbjct 702 GAAGGAAATGCAAAGGATCAGCTTAAGAGCTCAGCT-TATTACAGCATGATTCTTCTA-C 759
Query 1622 AAAGATTTGAAGAGGTTTTCTTC-TGTGAAAACG-TTGACAACAATAAATATCGTGAGGT 1679
|||||| || ||||||| | || |||||||||| || ||||| ||| | || |||||
Sbjct 760 AAAGATGGGAGGAGGTTTAC-TCTTGTGAAAACGCTT-ACAAC--GAAA-ACCGCGAGGT 814
Query 1680 TGTAGTTGATGTGGAGGTAGAAACAGAAGTGGTCAAGCTTGAAGGAGACAAG--ATT--G 1735
|||||||||||| || || ||| ||||||| || ||||||| ||| |||||| ||| |
Sbjct 815 TGTAGTTGATGTTGAAGTGGAACCAGAAGTTGTGAAGCTTG-AGG-GACAAGAAATTGGG 872
Query 1736 CAAGAGAGATAAAAGGTGTGAATTCAGATGGAGTTGTGTGGTTTAG-TGTCT-CAGCGAC 1793
|| | | | |||||| ||| || | |||| ||| | |||||| | || | ||| ||
Sbjct 873 AAAAATACA-AAAAGG-GTGGATGAAAATGGGGTTTTTTGGTTT-GCGGT-TGCAGAGA- 927
Query 1794 TGATAAGATTGGTCTTG-GGTCTGTGGTCTTGGAGAGGATGAAATGGGAAGAGGAGAGGT 1852
| | ||| ||| ||| | ||||||||| |||||||||||||||||||||||||||| |
Sbjct 928 --AGAGGATAGGT-TTGAGATCTGTGGTCATGGAGAGGATGAAATGGGAAGAGGAGAGAT 984
Query 1853 TTGGTTGGTCGAACAAAG-GCGATGAACTAAGGTCTAGCATTAAGAGAA-CTGAGAAATT 1910
| || ||| || || || | || | | | | | |||||| || |||||| |||
Sbjct 985 TCGGGTGGAAGATTGAACCGCAAAGAGC-A-G-TG--G--TTAAGA-AATCTGAGAGATT 1036
Query 1911 TGAA-G-ACGGTGGACCGCATTGGAAGAGTTATAGATGCTATGTACTGGTAGAGAGCTTT 1968
| || | | || || || ||||||||||||||||||| ||||| |||| |||||||||
Sbjct 1037 T-AATGGA-GGCGGTTCGAATTGGAAGAGTTATAGATGTTATGTGTTGGTGGAGAGCTTT 1094
Query 1969 GAATTGAAGAGAGCTGATGGGAGTTTGGTATTGACATATGAGTTTAAACATGTTGATAAG 2028
||||||| |||| ||| |||||| || ||||||| ||||||||| ||||||||||||
Sbjct 1095 GAATTGAGGAGAAAGGATAAGAGTTTAGTGTTGACATTTGAGTTTAAGCATGTTGATAAG 1154
Query 2029 TTGAAGAGC-AAGTGGGA 2045
|||| || | ||||||||
Sbjct 1155 TTGA-GAACCAAGTGGGA 1171
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 101555702535
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5