BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg911148 Length=312 Score E Sequences producing significant alignments: (Bits) Value AT1G13605.1 | Symbols: | Encodes a defensin-like (DEFL) family... 394 3e-109 > AT1G13605.1 | Symbols: | Encodes a defensin-like (DEFL) family protein. | chr1:4658538-4659106 FORWARD LENGTH=473 Length=473 Score = 394 bits (213), Expect = 3e-109 Identities = 282/315 (90%), Gaps = 6/315 (2%) Strand=Plus/Plus Query 1 ATGGCGAGACTTATCTTTCATTTTGTATTCGCTCTTATTGTTGCATATTATTTATTGTCG 60 ||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||| Sbjct 66 ATGGCGAGACTTATCTTTCATTTTGTATTTGCTCTTATCCTTGCAGCTTATTTATTGTCG 125 Query 61 GTATCTGATGCGATA-GTAAGAGAATGGAAAGAACCATGCTTTTGTCCTTCCACAAATCC 119 ||| ||||||||||| | |||| |||| ||||||| |||||||||||||||| |||||| Sbjct 126 GTAACTGATGCGATACCT-AGAGGATGGCAAGAACCGTGCTTTTGTCCTTCCAAAAATCC 184 Query 120 TTACTGCAACTGTGGCGATGATCTTCAAGTTCCTACTCCTTCAGTGATTGGTCCTAACCC 179 ||||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||| || Sbjct 185 TTACTGCGACTGTGGCGATGATCTTCAAGTTCCTACTACTTCAGTGATTAGTCCTAAACC 244 Query 180 TAAAATCGAAAAGTGTGCGCGTTGC-AATGGAAACTCTCAATGTAACAAAGTTTGTCCGG 238 || ||| || |||||||||||||| || ||||||||||||| |||||||||||||||| Sbjct 245 TATAATTGAGCAGTGTGCGCGTTGCGAA-AGAAACTCTCAATGCAACAAAGTTTGTCCGG 303 Query 239 CAACGTGCAAATACAAAGTCTGTATATACAATCCAACATGTGATTTGCA-TACATGTTAT 297 ||||||||||||||||||||||||||| |||| ||||||||| || || ||||||| || Sbjct 304 CAACGTGCAAATACAAAGTCTGTATATTTAATCGAACATGTGAGTT-CAGTACATGTCAT 362 Query 298 TGCTATATATGTTGA 312 ||||||| ||||||| Sbjct 363 TGCTATAGATGTTGA 377 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 14477111712 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5