BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg911263
Length=1599
Score E
Sequences producing significant alignments: (Bits) Value
AT1G14670.1 | Symbols: | Endomembrane protein 70 protein famil... 2204 0.0
AT2G01970.1 | Symbols: | Endomembrane protein 70 protein famil... 1430 0.0
AT5G37310.1 | Symbols: | Endomembrane protein 70 protein famil... 754 0.0
> AT1G14670.1 | Symbols: | Endomembrane protein 70 protein family
| chr1:5037612-5040528 FORWARD LENGTH=2165
Length=2165
Score = 2204 bits (1193), Expect = 0.0
Identities = 1312/1370 (96%), Gaps = 6/1370 (0%)
Strand=Plus/Plus
Query 232 TTTGAGATTCTATACAACAAGGACCGTGTGATTGAGATCAGTGCCAGGATGGATCCTCAT 291
||||||||||||||||| |||||||||||||| ||||||||||| || ||||||||||||
Sbjct 538 TTTGAGATTCTATACAATAAGGACCGTGTGATCGAGATCAGTGCTAGAATGGATCCTCAT 597
Query 292 TCGCTTGTGGATCTCACTGAGGACAAGGAAGTTGATGCAGAGTTTATGTACAATGTGAAG 351
||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||
Sbjct 598 TCGCTTGTGGATCTCACTGAGGATAAGGAAGTTGATGCAGAGTTTATGTACACTGTGAAG 657
Query 352 TGGAAGGAAACCGAGACCCCTTTTGAGAAAAGAATGGAGAAGTACTCTATGTCTTCTTCT 411
||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 658 TGGAAGGAAACTGAGACTCCTTTTGAGAAAAGAATGGAGAAGTACTCTATGTCTTCTTCT 717
Query 412 CTTCCACATCACTTGGAAATCCACTGGTTCTCCATTATTAACTCATGTGTCACTGTCCTT 471
||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 718 CTTCCACATCATTTGGAAATCCACTGGTTCTCCATTATTAACTCCTGTGTCACTGTCCTT 777
Query 472 CTTTTGGCTGGATTCCTTGCAACTATCTTAATGCGAGTCCTCAAGAATGATTTCATGAAG 531
|||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct 778 CTTTTGACTGGATTCCTTGCAACTATCTTGATGCGAGTCCTCAAGAACGATTTCATGAAG 837
Query 532 TATGCTCAAGATGAGGAAGCTGCTGATGATCAAGAGGAAACTGGATGGAAGTACATCCAT 591
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 838 TATGCTCAAGATGAGGAAGCTGCTGATGATCAAGAGGAAACTGGATGGAAGTACATTCAT 897
Query 592 GGTGATGTGTTTCGGTTCCCTACTCACAATTCTTTATTTGCCGCATCCCTCGGTAGTGGC 651
|| |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct 898 GGCGATGTGTTTCGGTTCCCTACTCACAATTCTTTATTTGCTGCATCGCTCGGTAGTGGC 957
Query 652 ACTCAATTGTTCACGCTCACCATATTTATTTTCATGCTTGCTCTTGTTGGAGTGTTCTAC 711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 958 ACTCAATTGTTCACGCTCACCATATTTATTTTCATGCTTGCTCTTGTTGGAGTGTTCTAC 1017
Query 712 CCATACAACCGAGGAGCACTCTTTACCGCTTTGGTGGTCATTTACGCTCTCACTTCTGGA 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1018 CCATACAACCGAGGAGCACTCTTTACCGCTTTGGTGGTCATTTACGCTCTCACTTCTGGA 1077
Query 772 ATTGCCGGATACACATCCGCCTCTTTCTACTGCCAACTTGAAGGAAAAAGCTGGGTGAGG 831
||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct 1078 ATTGCCGGATACACATCTGCCTCTTTCTACTGTCAACTTGAAGGAAAAAGCTGGGTGAGG 1137
Query 832 AACTTGTTACTCACTGGGTGTATCTTCTGTGGCCCATTATTCCTAACCTTTTGCTTCCTT 891
||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1138 AACTTGTTACTCACTGGATGTCTCTTCTGTGGCCCATTATTCCTAACCTTTTGCTTCCTT 1197
Query 892 AACACCGTAGCCATCACCTACACTGCAACTGCTGCATTACCCTTTGGAACCATTGTGGTG 951
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1198 AACACCGTAGCCATCACCTACACTGCAACCGCTGCATTACCCTTTGGAACCATTGTGGTG 1257
Query 952 ATCGTCCTTATATGGACTCTAGTCACATCGCCTTTACTCGTCTTGGGTGGTATTGCGGGT 1011
||||||||||||||||||||||| || || ||||||||||| ||||||||||| ||||||
Sbjct 1258 ATCGTCCTTATATGGACTCTAGTTACCTCACCTTTACTCGTTTTGGGTGGTATCGCGGGT 1317
Query 1012 AAAAACAGCAAAGCAGAGTTCCAAGCACCATGCCGTACAACCAAATATCCCCGTGAGATT 1071
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1318 AAAAACAGCAAAGCAGAGTTCCAAGCACCATGCCGTACAACCAAATATCCTCGTGAGATT 1377
Query 1072 CCACCACTCCCTTGGTACAGAAGTGCTATTCCTCAGATGGCCATGGCTGGTTTTCTTCCT 1131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1378 CCACCACTCCCTTGGTACAGAAGTGCTATTCCTCAGATGGCCATGGCTGGTTTTCTTCCT 1437
Query 1132 TTCAGTGCCATCTATATCGAGCTTTACTACATTTTCGCTAGTGTCTGGGGTCACCGGATC 1191
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1438 TTCAGTGCCATCTACATCGAGCTTTACTACATTTTCGCTAGTGTCTGGGGTCACCGGATC 1497
Query 1192 TACACCATCTACAGCATCCTCTTCATTGTCTTCATCATTCTCATCATAGTCACTGCTTTT 1251
|||||||||||||||||| | ||||| || ||||||||||||||||| ||||||||||||
Sbjct 1498 TACACCATCTACAGCATCTTATTCATCGTTTTCATCATTCTCATCATCGTCACTGCTTTT 1557
Query 1252 ATAACCGTTGCCTTGACTTACTTCCAACTCGCTGCTGAAGATCACCAATGGTGGTGGAGA 1311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1558 ATAACCGTTGCCTTGACTTACTTCCAACTCGCTGCTGAAGATCACCAATGGTGGTGGAGA 1617
Query 1312 TCATTCCTTTGTGGTGGATCGACCGGTCTGTTCATCTACGCATACTGCTTATACTATTAC 1371
|||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||
Sbjct 1618 TCATTCCTATGTGGTGGATCGACCGGTTTGTTTATCTACGCATACTGCTTATACTATTAC 1677
Query 1372 TATGCACGATCAGACATGTCGGGTTTTATGCAAACCTCGTTTTTTCTTCGGATACAAGGC 1431
|| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct 1678 TACGCACGATCAGACATGTCGGGTTTTATGCAAACCTCGTTTTT-CTTCGGATACATGGC 1736
Query 1432 TTGCATTTGCTACGGACTCTTCTTAATGCTGGGAACAGTCGGCTTCTGTGGAGCCCTCCT 1491
|||||||||||||||| ||||||||||||| |||||||| |||||| | | |||||||||
Sbjct 1737 TTGCATTTGCTACGGATTCTTCTTAATGCTCGGAACAGTTGGCTTCCGCGCAGCCCTCCT 1796
Query 1492 CTTCGTCCGTCACATTTACCGGTCGATCAAATGCGAGTAAGAAGGTCGGTACACCAATCT 1551
||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1797 CTTTGTCCGTCACATTTACCGGTCGATCAAATGCGAGTAAGAAGGTCTGTACACCAATCT 1856
Query 1552 T-TTCACGTTGGTTT--T-CTTCTGCTTCTGGCTCCTTACGAATTTTGCT 1597
| || | |||| ||| | ||||| |||||| || |||||||||||||||
Sbjct 1857 TCTT-ATGTTGATTTCCTTCTTCTTCTTCTGCCTTCTTACGAATTTTGCT 1905
Score = 333 bits (180), Expect = 3e-90
Identities = 188/192 (98%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 1 ATGAGGACACCGACGACGCTTCTCCTTCTTGTCGGAGCTATCCTCTTCTCCGGCGCCGGC 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 58 ATGAGGACACCGACGACGATTCTCCTTCTTGTCGGAGCTATCCTCTTCTCCGGCGCCGGC 117
Query 61 CATGTCAGATCTGACGCCTCCGACCACCGTTACAAGGAAGGAGACACCGTTCCTCTCTAC 120
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 118 TATGTCAGATCCGACGCCTCCGACCACCGTTACAAGGAAGGAGACACCGTTCCTCTCTAC 177
Query 121 GCCAACAAGGTCGGCCCATTTCACAATCCAAGTGAGACGTATCGGTATTTTGATCTTCCC 180
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 178 GCCAACAAGGTCGGCCCATTTCACAATCCAAGTGAGACGTATCGATATTTTGATCTTCCC 237
Query 181 TTCTGTATCCCA 192
||||||||||||
Sbjct 238 TTCTGTATCCCA 249
> AT2G01970.1 | Symbols: | Endomembrane protein 70 protein family
| chr2:451871-454885 REVERSE LENGTH=2171
Length=2171
Score = 1430 bits (774), Expect = 0.0
Identities = 1133/1308 (87%), Gaps = 17/1308 (1%)
Strand=Plus/Plus
Query 232 TTTGAGATTCTATACAACAAGGACCGTGTGATTGAGATCAGTGCCAGGATGGATCCTCAT 291
||||||||| | ||||| ||||| || |||||||| |||| ||| || ||||||||||||
Sbjct 547 TTTGAGATTTTGTACAATAAGGATCGGGTGATTGAAATCAATGCTAGAATGGATCCTCAT 606
Query 292 TCGCTTGTGGATCTCACTGAGGACAAGGAAGTTGATGCAGAGTTTATGTACAATGTGAAG 351
|||||||||||||| |||||||| |||||||| ||||| ||||||||||||| |||||||
Sbjct 607 TCGCTTGTGGATCTTACTGAGGATAAGGAAGTCGATGCTGAGTTTATGTACACTGTGAAG 666
Query 352 TGGAAGGAAACCGAGACCCCTTTTGAGAAAAGAATGGAGAAGTACT-CTATGTCTTCTTC 410
||||||||||| ||||| ||||||||||||||||||| ||||| | |||||||||||||
Sbjct 667 TGGAAGGAAACTGAGACTTCTTTTGAGAAAAGAATGGATAAGTA-TGCTATGTCTTCTTC 725
Query 411 TCTTCCACATCACTTGGAAATCCACTGGTTCTCCATTATTAACTCATGTGTCACTGTCCT 470
||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct 726 TCTTCCACATCACTTGGAAATCCACTGGTTCTCCATTATTAACTCCTGCGTCACTGTCCT 785
Query 471 TCTTTTGGCTGGATTCCTTGCAACTATCTTAATGCGAGTCCTCAAGAATGATTTCATGAA 530
||||||| |||| ||||||||||| ||| | ||||| |||||||||||||||||||||||
Sbjct 786 TCTTTTGACTGGTTTCCTTGCAACCATCCTGATGCGGGTCCTCAAGAATGATTTCATGAA 845
Query 531 GTATGCTCAAGATGAGGAAGCTGCTGATGATCAAGAGGAAACTGGATGGAAGTACATCCA 590
|||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||
Sbjct 846 GTATGCTCAAGATGAGGAAGCTGCTGATGATCAAGAGGAAACCGGATGGAAATACATTCA 905
Query 591 TGGTGATGTGTTTCGGTTCCCTACTCACAATTCTTTATTTGCCGCATCCCTCGGTAGTGG 650
||| ||||| || |||||||| | |||| ||| | ||||| ||||| || ||||| ||
Sbjct 906 TGGAGATGTCTTCCGGTTCCCAAAGAACAAATCTCTCTTTGCTGCATCTCTTGGTAGCGG 965
Query 651 CACTCAATTGTTCACGCTCACCATATTTATTTTCATGCTTGCTCTTGTTGGAGTGTTCTA 710
|| || |||||||| || ||||| || |||||||||||| | |||||||||||||||||
Sbjct 966 TACCCAGTTGTTCACTCTGACCATCTTCATTTTCATGCTTTCACTTGTTGGAGTGTTCTA 1025
Query 711 CCCATACAACCGAGGAGCACTCTTTACCGCTTTGGTGGTCATTTACGCTCTCACTTCTGG 770
||||||||||| ||||||||||| || |||||||| || || || |||||||| |||||
Sbjct 1026 TCCATACAACCGTGGAGCACTCTTCACTGCTTTGGTCGTTATCTATGCTCTCACATCTGG 1085
Query 771 AATTGCCGGATACACAT-CCGCCTCTTTCTACTGCCAACTTGAAGGAAA-AAGCTGGGTG 828
||||||||||||||| | || ||||||||||||| ||||| |||||||| || ||||||
Sbjct 1086 AATTGCCGGATACAC-TGCCTCCTCTTTCTACTGTCAACTCGAAGGAAAGAAT-TGGGTG 1143
Query 829 AGGAACTTGTTACTCACTGG-GTGTATCTTCTGTGGCCCATTATTCCTAACCTTTTGCTT 887
|| || ||| | || ||||| | || |||||||||||||| |||| || ||||| |||||
Sbjct 1144 AGAAATTTGCTGCTAACTGGAG-GTCTCTTCTGTGGCCCACTATTTCTCACCTTCTGCTT 1202
Query 888 CCTTAACACCGTAGCCATCACCTACACTGCAACTGCTGCA-TTACCCTTTGGAACCATTG 946
||| |||||||| || ||| | |||| ||||||||| || || ||||||||||||||
Sbjct 1203 CCTAAACACCGTTGCAATCGCATACAGTGCAACTGCCGCTCTT-CCCTTTGGAACCATCA 1261
Query 947 TGGTGATCGTCCTTATATGGACTCTAGTCACATCGCCTTTACTCGTCTTGGGTGGTATTG 1006
| ||||||||||| |||||||| |||||||| ||||||||||| || |||||||||||||
Sbjct 1262 TAGTGATCGTCCTCATATGGACACTAGTCACTTCGCCTTTACTTGTGTTGGGTGGTATTG 1321
Query 1007 CGGGTAAAAACAGCAAAGCAGAGTTCCAAGCACCA-TGCCGTACAACCAAATATCCCCGT 1065
| ||||||||||||||||| ||||||||||| ||| | ||| || || || ||||| ||
Sbjct 1322 CCGGTAAAAACAGCAAAGCTGAGTTCCAAGCTCCAGT-CCGCACCACTAAGTATCCTCGG 1380
Query 1066 GAGATTCCACCACTCCCTTGGTACAGAAGTGCTATTCCTCAGATGGCCATGGCTGGTTTT 1125
||||| || |||||||| |||||||| |||||| | || ||||||||||||||||| |||
Sbjct 1381 GAGATCCCGCCACTCCCATGGTACAGGAGTGCTGTACCGCAGATGGCCATGGCTGGATTT 1440
Query 1126 CTTCCTTTCAGTGCCATCTATATCGAGCTTTACTACAT-TTTCGCTAGTGTCTGGGGTCA 1184
|||||||||||||||||||| |||||||| || ||||| ||| || ||||| ||||| ||
Sbjct 1441 CTTCCTTTCAGTGCCATCTACATCGAGCTATATTACATCTTT-GCCAGTGTTTGGGGCCA 1499
Query 1185 CCGGATCTACACCATCTACAGCATCCTCTTCATTGTCTTCATCATTCTCATCATAGTCAC 1244
|| ||||| ||||| ||||||||||||||||| ||||||||||| || | || |||||
Sbjct 1500 TCGTATCTATACCATTTACAGCATCCTCTTCATCGTCTTCATCATCCTGTTGATCGTCAC 1559
Query 1245 TGCTTTTATAACCGTTGCC-TTGACTTACTTCCAACTCGCTGCTGAAGATCACCAATGGT 1303
|||||||||||| |||||| || ||||||||||||||||||||||||||||| ||||||
Sbjct 1560 TGCTTTTATAACAGTTGCCCTT-ACTTACTTCCAACTCGCTGCTGAAGATCATGAATGGT 1618
Query 1304 GGTGGAGATCATTCCTTTGTGGTGGATCGACCGGTCTGTTCATCTACGCATACTGCTTAT 1363
|||||||||||||||| |||||||||||||| |||||||| || || || ||||||||||
Sbjct 1619 GGTGGAGATCATTCCTATGTGGTGGATCGACTGGTCTGTTTATATATGCGTACTGCTTAT 1678
Query 1364 ACTATTACTATGCACGATCAGACATGTCGGGTTTTATGCAAACCTCGTTTTTTCTTCGGA 1423
|||| ||||| ||| ||||||||||||| ||||| |||||||| || || || ||||||
Sbjct 1679 ACTACTACTACGCAAGATCAGACATGTCTGGTTTCATGCAAACATCCTTCTT-CTTCGGG 1737
Query 1424 TACAAGGCTTGCATTTGCTACGGACTCTTCTTAATGCTGGGAACAGTCGGCTTCTGTGGA 1483
|||| |||||||||||| ||||| ||||| | ||||| ||||| || |||||| | |
Sbjct 1738 TACATGGCTTGCATTTGTTACGGTTTCTTCCTCATGCTTGGAACCGTTGGCTTCCGCGCT 1797
Query 1484 GCCCTCCTCTTCGTCCGTCACATTTACCGGTCGATCAAATGCGAGTAA 1531
|| |||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct 1798 GCTCTCCTCTTCGTCCGCCACATTTACCGGTCGATTAAATGCGAGTAA 1845
Score = 219 bits (118), Expect = 9e-56
Identities = 164/186 (88%), Gaps = 4/186 (2%)
Strand=Plus/Plus
Query 9 ACCGACGACGCTTCTCCTTC-TTGTCGGAGCTATCCTCTTCTCCGGCGCCGGCCA-TGTC 66
||| |||||||| |||| || || |||||||| || |||||||||||||||| | ||||
Sbjct 75 ACCAACGACGCTGCTCC-TCTTTATCGGAGCTCTCATCTTCTCCGGCGCCGG-TACTGTC 132
Query 67 AGATCTGACGCCTCCGACCACCGTTACAAGGAAGGAGACACCGTTCCTCTCTACGCCAAC 126
||||| || ||||||||||||||||||||||| || ||| ||||||||||||||||||||
Sbjct 133 AGATCCGATGCCTCCGACCACCGTTACAAGGACGGTGACTCCGTTCCTCTCTACGCCAAC 192
Query 127 AAGGTCGGCCCATTTCACAATCCAAGTGAGACGTATCGGTATTTTGATCTTCCCTTCTGT 186
||||||||||| ||||||||||| |||||||||||||| ||||| ||||| ||||| |||
Sbjct 193 AAGGTCGGCCCCTTTCACAATCCCAGTGAGACGTATCGCTATTTCGATCTCCCCTTTTGT 252
Query 187 ATCCCA 192
|| |||
Sbjct 253 ATTCCA 258
> AT5G37310.1 | Symbols: | Endomembrane protein 70 protein family
| chr5:14772512-14776207 REVERSE LENGTH=2143
Length=2143
Score = 754 bits (408), Expect = 0.0
Identities = 1032/1329 (78%), Gaps = 59/1329 (4%)
Strand=Plus/Plus
Query 232 TTTGAGATTCTATACAACAAGGACCGTGTGATTGAGATCAGT-GCCAGGATGGATCC-TC 289
||||||||| | || || ||||||||||| || || || | | | |||| || ||
Sbjct 598 TTTGAGATTTTCTATAATAAGGACCGTGTTATCGAAATTA-TCGTGAGGACAGA-CCAGA 655
Query 290 A-TTCGCTTGTGGATC-TCACTGAGGACAAGGAAGTTGATGCAGAGTTT-ATGTACA-AT 345
| ||| |||||||| | | ||||||||||||||||| | | || ||| | |||| |
Sbjct 656 ATTTC-CTTGTGGA-CTTGACTGAGGACAAGGAAGTCCAAGTGGA-TTTCACATACACA- 711
Query 346 G-T-GAAGTGGAAGGAAACCGAGACCCCTTTTGAGAAAAGAATGGAGAAGTACTCTA-TG 402
| | | | ||||||||||| || | || || ||||| || |||||||| ||||| | ||
Sbjct 712 GTTCG-A-TGGAAGGAAACTGAAATTCCATTCGAGAAGAGGATGGAGAAATACTC-ACTG 768
Query 403 TCTTCTTCTCTTCCACATCACTTGGAAATCCACTGGTTCTCCATTATTAACTCATGTGTC 462
|||| || | |||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct 769 GCTTCATCAATGCCACATCACTTGGAAATCCACTGGTTCTCCATCATTAATTCATGTGTC 828
Query 463 ACTGTCCTTCTTTTGGCTGGATTCCTTGCAACTAT-CTTAATGCGAGTCCTCAAGAATGA 521
|| || ||||| ||| |||| |||||||| || || || | |||||||| | ||||||||
Sbjct 829 ACAGTTCTTCTCTTGACTGGTTTCCTTGCGACGATTCTCA-TGCGAGTCTTGAAGAATGA 887
Query 522 TTTCATGAAGTATGCTCAAGATGAGGAAGCTGCTGATGATCAAGAGGAAACTGGATGGAA 581
||| | |||||||| || ||||| || || | |||||| ||||| || ||||| |||||
Sbjct 888 TTTTGTCAAGTATGCACATGATGAAGAGGCAGTTGATGACCAAGAAGAGACTGGGTGGAA 947
Query 582 GTACATCCATGGTGATGTGTTTCGGTTCCCTACTCACAATTCTTTATTTGCCGCATCCCT 641
| |||||||||||||| ||| ||||||| | ||||| || | | || ||| ||||
Sbjct 948 ATTGATCCATGGTGATGTATTTAGGTTCCCCAAACACAAATCCCTGCTGGCTGCAGCCCT 1007
Query 642 CGGTAGTGGCACTCAATTGTTCACGCTCACCATATTT--ATTTTCATGCTTGCTCTT-GT 698
||| |||||| |||||||| || || | | | ||| || ||||||||||| || ||
Sbjct 1008 TGGTTCTGGCACACAATTGTTTACACT-AGC-TGTTTTCATCTTCATGCTTGCA-TTAGT 1064
Query 699 TGGAGTGTTCTA-CCCATACAACCGAGGAGCACTCTTTACCGCTTTGGTGGTCATTTACG 757
|| || || || ||| |||||||| |||||| | ||||| || || |||||||| || |
Sbjct 1065 CGGTGTCTTTTATCCC-TACAACCGTGGAGCATTGTTTACTGCATTAGTGGTCATATATG 1123
Query 758 CTCTCACTTCTGGAATTGCCGGATACACATCC-GCCTCTTTCTACTGCCAACTTGAAGGA 816
|||| ||||| || ||||||||||| || | | || |||||||| ||||| || ||||||
Sbjct 1124 CTCTTACTTCAGGGATTGCCGGATATAC-TGCTGCTTCTTTCTATTGCCAGCTAGAAGGA 1182
Query 817 AA-AAGCTGGGTGAGGAACTTGTTA--CTCACTGGGTGTATCTTCTGTGG-CC-CATTAT 871
| || |||||| ||||| | |||| || ||||| | |||||||||| || | || |
Sbjct 1183 ACTAA-CTGGGTTAGGAA-T-GTTATACTGACTGGAAGCCTCTTCTGTGGACCTC-TT-T 1237
Query 872 TCCTAACCTTTTGCTTCCTTAACACCGTAGCCATCACCTAC-ACTGCAACTGCTGCATTA 930
| | || || | ||||||||| || || || || | ||| | || ||||| || ||
Sbjct 1238 TGATCACGTTCTCCTTCCTTAATACTGTTGCGATTGCTTACCAA-GCCACTGCAGCGTTG 1296
Query 931 CCCTTTGGAACCATTGTGGTGATCGTCCTTATATGGACTCTAGTCACATCGCCTTTACTC 990
|| ||||| || |||||||| || ||||||||||| |||| || || || || || |
Sbjct 1297 CCATTTGGGACAATTGTGGTTATTTTCCTTATATGGGCTCTGGTTACTTCACCATTGTTA 1356
Query 991 GTCTTGGGTGGTATTGC-GGGTAAAAACAGCAAAGCAGAGTTCCAAGCACCATGCCGTAC 1049
| || || |||||||| ||| || ||||| ||| | ||||| ||||| || || |||||
Sbjct 1357 ATATTAGGAGGTATTGCTGGG-AAGAACAGAAAATCCGAGTTTCAAGCTCCTTGTCGTAC 1415
Query 1050 AACCAAATATCCCCGTGAGATTCCACCACTCCCTTGGTACAGAAGTGCTA-TTCCTCAGA 1108
|| |||||||| | ||||| |||||| | | ||||||| | || | | |||| ||||
Sbjct 1416 CACAAAATATCCAAGAGAGATCCCACCAATGCGTTGGTACCGGAGAAC-ACTTCCGCAGA 1474
Query 1109 TGGCCATGGCTGGTTTTCTT-CCTTTCAGTGCCATCTATATCGAGCTTTACTACAT-TTT 1166
|||| |||||||||||| || || ||||||||||| || ||||||||||||||||| |||
Sbjct 1475 TGGCTATGGCTGGTTTT-TTACCGTTCAGTGCCATTTACATCGAGCTTTACTACATATTT 1533
Query 1167 CGCTAGTGTCTGGGGTCACCGGATCTACACCATCTACAGCATCCTCT-TCATTGTCTTCA 1225
|| ||||| ||||||||| | || ||||||||||| || || || | | || ||||||
Sbjct 1534 -GCCAGTGTTTGGGGTCACAGAATATACACCATCTATAGTATTCTGTCT-ATCGTCTTCC 1591
Query 1226 TCATTCTCATCATAGTCACTGCTTTTATAACCGTTGCCTTGACTTACTTCCAACTCGCTG 1285
| |||||| | ||||||||||||||||| || ||||| || || ||||||||||| ||||
Sbjct 1592 TTATTCTCGTTATAGTCACTGCTTTTATCACGGTTGCATTAACGTACTTCCAACTTGCTG 1651
Query 1286 CTGAAGATCACCAATGGTGGTGGAGATCATTCCTTTGTGGTGGATCGACCGGTCTG-TTC 1344
||||||| || | ||||||||||||||||| || || |||||||| || || || |||
Sbjct 1652 CTGAAGACCATGAGTGGTGGTGGAGATCATTGCTATGCGGTGGATCAACGGG-CTTATTC 1710
Query 1345 ATCTACGCATACTGCTTATACTATTACTATGCACGATCAGACATGTC-GGGTTTTATGCA 1403
|| || || |||||||| || || ||||||||||||||||| ||||| ||||| |||||
Sbjct 1711 ATATATGCCTACTGCTTGTATTACTACTATGCACGATCAGATATGTCAGGGTTC-ATGCA 1769
Query 1404 AACCTCGTTTTTTCTTCGGATACAAGGCTTGCATTTGCTACGGACTCTTCTTAATGCT-G 1462
|| || || || ||| || |||| ||||||||| ||||||||| ||||| | ||||| |
Sbjct 1770 GACTTCCTTCTT-CTTTGGCTACATGGCTTGCATCTGCTACGGATTCTTCCTCATGCTCG 1828
Query 1463 GGAACAGTCGGCTTCTGTGGAGCCCTCCTCTTCGTCCGTCACATTTACCGGTCGATCAAA 1522
||| || |||| ||||||| |||| ||||| || |||||||||||||| || |||||
Sbjct 1829 GGA-CAATCGGATTCTGTGCTTCCCTTCTCTTTGTTCGTCACATTTACCGCTCAATCAAG 1887
Query 1523 TGCGAGTAA 1531
|||||||||
Sbjct 1888 TGCGAGTAA 1896
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 78965457285
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5