BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg911524
Length=594
Score E
Sequences producing significant alignments: (Bits) Value
AT1G17180.1 | Symbols: ATGSTU25, GSTU25 | glutathione S-transfe... 913 0.0
AT1G17170.1 | Symbols: ATGSTU24, GST, GSTU24 | glutathione S-tr... 449 1e-125
AT1G78380.1 | Symbols: ATGSTU19, GST8, GSTU19 | glutathione S-t... 364 4e-100
AT1G78360.1 | Symbols: ATGSTU21, GSTU21 | glutathione S-transfe... 327 5e-89
AT1G78340.1 | Symbols: ATGSTU22, GSTU22 | glutathione S-transfe... 265 4e-70
> AT1G17180.1 | Symbols: ATGSTU25, GSTU25 | glutathione S-transferase
TAU 25 | chr1:5872145-5873086 FORWARD LENGTH=857
Length=857
Score = 913 bits (494), Expect = 0.0
Identities = 553/582 (95%), Gaps = 2/582 (0%)
Strand=Plus/Plus
Query 1 ATGGCAGACGAGGTGATTCTTCTTGATTTCTGGCCGAGTATGTTTGGAATGAGGACGAGG 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 64 ATGGCAGACGAGGTGATTCTTCTTGATTTCTGGCCGAGCATGTTTGGAATGAGGACGAGG 123
Query 61 ATTGCTCTAGAAGAGAAAAATGTCATATTCGATTACAGAGAACAAGATCTATGGAACAGA 120
|||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| |
Sbjct 124 ATTGCTTTAGAAGAGAAAAATGTCAAATTCGATTACAGAGAACAAGATCTGTGGAACAAA 183
Query 121 AGCCCGATTCTCCTCGAGATGAATCCGGTTCATAAGAAAATACCGGTTCTCATCCACAAT 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 184 AGCCCGATTCTCCTCGAGATGAATCCGGTTCATAAGAAAATACCGGTTCTCATCCACAAT 243
Query 181 GGTAAACCGGTCTGTGAATCACTCATCCAAATGC-AATACATCGACGAAGTTTGGCCTAG 239
||||| ||||| ||||||||||||||||| || | |||||||||||||||||||||||||
Sbjct 244 GGTAATCCGGTATGTGAATCACTCATCCAGAT-CGAATACATCGACGAAGTTTGGCCTAG 302
Query 240 CAAAACCCCGCTTCTTCCTTCTGACCCTTACCAAAGAGCTCATGCCAAATTTTGGGGAGA 299
||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct 303 CAAAACCCCACTTCTTCCTTCTGATCCTTACCAAAGAGCTCAGGCCAAATTTTGGGGAGA 362
Query 300 TTTCATCGACAAGAAGGTGTATGCTTCAGCGAGGTTGATTTGGGGAGCGAAAGGCGAAGA 359
|||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 363 TTTCATTGATAAGAAGGTGTATGCTTCAGCGAGGTTGATTTGGGGAGCTAAAGGCGAAGA 422
Query 360 GCATGAGGCGGGGAAGAAGGAGTTCATCGAGATACTCAAGACACTAGAGTCTGAGCTTGG 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 423 GCATGAGGCGGGGAAGAAGGAGTTCATCGAGATACTCAAGACACTAGAGTCTGAGCTTGG 482
Query 420 AGACAAAACTTACTTTGGAGGGGAAACATTCGGTTATGTTGATATTGCTCTCATTGGATT 479
|||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct 483 AGACAAGACTTACTTTGGAGGTGAAACATTCGGTTATGTTGATATAGCTCTCATTGGATT 542
Query 480 TTACAGCTGGTTTGAAGCATATGAGAAGTTTGGGAATTTCAACATTGAAGTGGAGTGTCT 539
|||||| ||||||||||| |||||||||||||||| ||||| |||||||| |||||||
Sbjct 543 TTACAGTTGGTTTGAAGCGTATGAGAAGTTTGGGAGTTTCAGCATTGAAGCCGAGTGTCC 602
Query 540 AAAACTGATTGCTTGGGCTAAAAGATGTGTGAagagagagag 581
||||||||||||||||| |||||| |||||| ||||||||||
Sbjct 603 AAAACTGATTGCTTGGGGTAAAAGGTGTGTGGAGAGAGAGAG 644
> AT1G17170.1 | Symbols: ATGSTU24, GST, GSTU24 | glutathione S-transferase
TAU 24 | chr1:5869846-5870840 FORWARD LENGTH=855
Length=855
Score = 449 bits (243), Expect = 1e-125
Identities = 484/596 (81%), Gaps = 33/596 (6%)
Strand=Plus/Plus
Query 1 ATGGCAGACGAGGTGATTCTTCTTGATTTCTGGCCGAGTATGTTTGGAATGAGGACGAGG 60
|||||||| |||||||||||||| ||||||||| ||||||||||||| |||||||| ||
Sbjct 50 ATGGCAGATGAGGTGATTCTTCTGGATTTCTGGGCGAGTATGTTTGGGATGAGGACAAGA 109
Query 61 ATTGCTCTAGAAGAGAAAA-ATGTCATA-TTCGATTACAGAGAACAAGATCTATGGAA-C 117
|||||||| | ||||||| | || | | | |||| |||||||| |||||||||||||
Sbjct 110 ATTGCTCTGGCGGAGAAAAGA-GTTA-AGTACGATCACAGAGAAGAAGATCTATGGAATA 167
Query 118 AGAAGC-CCGATT-CTCCTCGAGATGAATCCGGTTCATAAGAAAATACCGGTTCTCATCC 175
|| ||| || || |||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct 168 AG-AGCTCC--TTGCTCCTCGAGATGAACCCGGTTCATAAGAAAATTCCGGTTCTCATCC 224
Query 176 ACAATGGTAAACCGGTCTGTGAATCACTCATCCAAATGC-AATACATCGACGAAG-TTTG 233
|||||||||||||||| |||||||| ||||| || || | | ||||| |||| || |||
Sbjct 225 ACAATGGTAAACCGGTATGTGAATCTCTCATTCAGAT-CGAGTACATAGACG-AGACTTG 282
Query 234 G-CCTAGCAA-AACCCCGCTTCTTCCTTCTGACCCTTACCAA-AGAGCTCATGCCAAATT 290
| || | ||| || ||| || ||||| || || ||||| ||| |||||||||||||||||
Sbjct 283 GCCCGA-CAATAA-CCCTCTCCTTCCCTCCGATCCTTA-CAAGAGAGCTCATGCCAAATT 339
Query 291 TTGGGGAGATTTCATCGACAAGAAGGTGTATGCTT-CAGCGAGGTTGATTTGGG-GAG-C 347
|||| || ||||||||||| |||||| ||| || | ||||| |||||||| | | |
Sbjct 340 CTGGGCCGACTTCATCGACAAAAAGGTGAATG-TTACGGCGAGAAGGATTTGGGCG-GTC 397
Query 348 GAAAGGCGAAGAGCATGAGGCGGGGAAGAAGGAGTTCATCGAGATACTCAAGACACTAGA 407
||||| || ||||| || || | |||||||| ||||| ||||||||||| |||||
Sbjct 398 -AAAGGTGAGGAGCAAGAAGC--AG-CCAAGGAGTTAATCGAAATACTCAAGACGCTAGA 453
Query 408 GTCTGAGCTTGGAGACAAAACTTACTTTGGAGGGGAAACATTCGGTTATGTTGATATTGC 467
|||||||||||||||||||| |||||||||| ||||| || || ||||| ||||| ||
Sbjct 454 GTCTGAGCTTGGAGACAAAAAGTACTTTGGAGACGAAACTTTTGGGTATGTAGATATAGC 513
Query 468 TCTCATTGGATTTTACAGCTGGTTTGAAGCATATGAGAAGTTTGGGAATTTCAACATTGA 527
|||||||||||| | |||||||||| || || ||||||||||| ||| ||| || ||
Sbjct 514 TCTCATTGGATTCCATAGCTGGTTTGCAGTGTACGAGAAGTTTGGAAATGTCAGTATCGA 573
Query 528 AG-TGGAGTGT-CTAAAACTGATTGCTTGGGCTAAAAGATGTGTGAagagagagag 581
| || ||||| | ||| || |||| ||||| ||||| ||| || ||||||||||
Sbjct 574 ATCTG-AGTGTTCGAAAT-TGGTTGCGTGGGCCAAAAGGTGTTTGGAGAGAGAGAG 627
> AT1G78380.1 | Symbols: ATGSTU19, GST8, GSTU19 | glutathione S-transferase
TAU 19 | chr1:29486413-29487906 REVERSE LENGTH=993
Length=993
Score = 364 bits (197), Expect = 4e-100
Identities = 473/601 (79%), Gaps = 40/601 (7%)
Strand=Plus/Plus
Query 1 ATGGCAG-ACGAGGTGATTCTTCTTGATTTCTGGCCGAGTATGTTTGGAATGAGGACGAG 59
||||| | ||||||||||||||||||||||||||||||||||||| || |||||||| ||
Sbjct 88 ATGGC-GAACGAGGTGATTCTTCTTGATTTCTGGCCGAGTATGTTCGGGATGAGGACAAG 146
Query 60 GATTGC-TCTAGAAG-AGAAAAATGTC-ATATTCGATTACAGAGAACAAGATCTATGGAA 116
||| || | | || | ||||| ||| | ||| || ||||||||| |||||||| ||||
Sbjct 147 GATCGCAT-T-GAGGGAGAAAGGTGTTGA-ATTTGAGTACAGAGAAGAAGATCTAAGGAA 203
Query 117 CA-GAAGCCCGATT-CTCCTCGAGATGAATCCGGTTCATAAGAAAATACCGGTTCTCATC 174
|| || | || || || ||| ||||||||||| |||| ||||| || || |||||||||
Sbjct 204 CAAGA-GTCCT-TTGCTTCTCCAGATGAATCCGATTCACAAGAAGATTCCTGTTCTCATC 261
Query 175 CACAATGGTAAACCGGTCTGT-GAATC-ACTCATCCAAATGCAATACATCGACGAAGTTT 232
||||||||||||||||| | ||||| | ||||||| | || ||||| ||||| || |
Sbjct 262 CACAATGGTAAACCGGT-TAACGAATCTA-TCATCCAGGTTCAGTACATTGACGAGGTCT 319
Query 233 GGCCT-AGCAA-AACCCCGCTTCTTCCTTCTGACCCTTACCAAAGAGCTCATGCCAAATT 290
|| || | ||| ||||| | ||||||||||| ||||||| |||||||| || | ||
Sbjct 320 GGTCTCA-CAAGAACCCTA-TCCTTCCTTCTGATCCTTACCTGAGAGCTCAAGCTAGGTT 377
Query 291 TTGGGGAGATTTCATCGACAAGAAGGTGTATGCT--TCAGCGAGGTTGATTTGGG-GAGC 347
|||| |||||||| ||||||||| |||||| | |||| ||| | | |||| || |
Sbjct 378 CTGGGCTGATTTCATTGACAAGAAGCTGTATGATGCTCAG--AGGAAGGTGTGGGCGA-C 434
Query 348 GAAAGGC-GAAGAGCATGAGGCGGGGAAGAAGGAGTTCATCGAGATACTCAAGACACTAG 406
||||| || || || ||||| ||||||||||| ||||| |||||||||||||| || |
Sbjct 435 -AAAGGGTGAGGAACAAGAGGCAGGGAAGAAGGATTTCATTGAGATACTCAAGACTCTTG 493
Query 407 AGTCTGAGCTTGGAGACAAAACTTACTTTGGAGGGGAA-ACATTCGGTTATGTTGATATT 465
| |||||||||||||||||| |||||||| | || || || || || ||||| || |||
Sbjct 494 AATCTGAGCTTGGAGACAAACCTTACTTTAGTGGCGATGACTTT-GGCTATGTAGACATT 552
Query 466 GC-TCTCATTGGATTTTACAGC-TGGTTTGAAGCATATGAGAAGTTTGGGAATTTCAACA 523
|| | | |||||||| |||| | |||||| |||||| |||||||||| || |||| |
Sbjct 553 GCGT-TGATTGGATTCTACA-CATGGTTTCCAGCATACGAGAAGTTTGCTAACTTCAGTA 610
Query 524 TTGAAG-TGGAGTGT-CTAAAACTGATTGCTTGGGCTAA-AAGATGTGTGAagagagaga 580
| ||| || || || | |||||||||||||||| ||| ||| ||| || |||| ||||
Sbjct 611 TCGAATCTG-AG-GTTCCGAAACTGATTGCTTGGGTTAAGAAG-TGTTTGCAGAGGGAGA 667
Query 581 g 581
|
Sbjct 668 G 668
> AT1G78360.1 | Symbols: ATGSTU21, GSTU21 | glutathione S-transferase
TAU 21 | chr1:29482070-29482966 REVERSE LENGTH=669
Length=669
Score = 327 bits (177), Expect = 5e-89
Identities = 470/606 (78%), Gaps = 41/606 (7%)
Strand=Plus/Plus
Query 1 ATGGCAGACGAGGTGATTCTTCTTGATTTCTGGCCGAGTATGTTTGGAATGAGGACGAGG 60
||||||| ||| ||||| ||||| | |||||||||||| ||||| ||||||||||||| |
Sbjct 1 ATGGCAGCCGAAGTGATCCTTCTCGGTTTCTGGCCGAGCATGTTCGGAATGAGGACGATG 60
Query 61 ATTGC-TCTAGAAGAGAAA--AATGTCA-TATTCGATTACAGAGAACAAGATCT-AT--G 113
|| || | |||| |||||| | || | || | || || |||||| | ||| | ||
Sbjct 61 ATCGCGT-TAGAGGAGAAAGGAGTG-AAGTA-T-GAGTATAGAGAAGAGGATGTGATCAA 116
Query 114 GAAC-AGAAG-CCCGATT-CTCCTCGAGATGAATCCGGTTCATAAGAAAATACCGGTTCT 170
||| || || ||| || || || |||||||||||| |||| |||| ||| ||||||||
Sbjct 117 TAACAAG-AGTCCC--TTGCTACTAGAGATGAATCCGATTCACAAGACAATCCCGGTTCT 173
Query 171 CATCCACAATGGTAAACCGGT-CTGTGAATCACTCATCCAAATGCAATACATCGACGAAG 229
||||||||||||||||||||| || |||||| || |||||||| ||||| || ||||| |
Sbjct 174 CATCCACAATGGTAAACCGGTTCT-TGAATCCCTTATCCAAATCCAATATATAGACGAGG 232
Query 230 TTTGGCCT-AGCAA-AACCCCGCTTCTTCCTTCTGACCCTTACCAAAGAGCTCATGCCAA 287
||||| || | ||| ||| | |||| |||||||| |||||||| |||||||| ||
Sbjct 233 TTTGGTCTGA-CAACAACTCAT-TTCTCCCTTCTGATCCTTACCATAGAGCTCAAGCTTT 290
Query 288 ATTTTGGGGAGATTTCATCGACAAGAAGG-----T-GTATGCTTCAGCGAGGTTGATTTG 341
|||||||| ||||||||||||||||||| | ||||| || | |||| || |||
Sbjct 291 ATTTTGGGCCGATTTCATCGACAAGAAGGAACAGTTGTATGTTTGTGGGAGGAAGACTTG 350
Query 342 GGGAGCGAAAGGCGAAGAGC-ATGAGGCGGGGAAGAAGGAGTTCATCGAGATACTCAAGA 400
|| | ||||||| || |||| | || || | || || ||||| || || ||||||||||
Sbjct 351 GGCAACGAAAGGTGAGGAGCTA-GAAGCAGCCAATAAAGAGTTTATTGAAATACTCAAGA 409
Query 401 CACTAGAGTCTGAGCTTGGAGACAAAAC-TTACTTTGGAGGGGA-AACATTCGG-TTATG 457
| || | | |||||| ||||| ||||| ||||||||| || || || |||||| || ||
Sbjct 410 CTCTTCAATGTGAGCTCGGAGA-AAAACCTTACTTTGGCGGCGATAA-ATTCGGGTT-TG 466
Query 458 TTGATATTGCTC-TCATTGGATTTTACAGCTGGTTTGAAGCATATGAGAAGTTTGGGAAT 516
| || |||| || | |||||||| || || |||||| |||||| |||||||||| ||
Sbjct 467 TAGACATTG-TCCTGATTGGATTCTATAGTTGGTTTCCAGCATACCAGAAGTTTGGTAAC 525
Query 517 TTCAACATTGAAGTGGAGTGTCTAAAACTGATTGCTTGGGCTAAAAGATGTGTG-Aagag 575
|||| ||| ||| |||||| | || ||||||||||||| ||||||||| || || ||
Sbjct 526 TTCAGCATCGAACCAGAGTGTTTGAAGCTGATTGCTTGGGGAAAAAGATGTATGCAA-AG 584
Query 576 agagag 581
||||||
Sbjct 585 AGAGAG 590
> AT1G78340.1 | Symbols: ATGSTU22, GSTU22 | glutathione S-transferase
TAU 22 | chr1:29472892-29473863 REVERSE LENGTH=877
Length=877
Score = 265 bits (143), Expect = 4e-70
Identities = 450/595 (76%), Gaps = 34/595 (6%)
Strand=Plus/Plus
Query 1 ATGGCAGACGAGGTGATTCTTCTT-GATTTCTGGCCGAGTATGTTTGGAATGAGGA-CGA 58
||||| || || ||||| ||| || ||||| ||||||||| || ||| | | || |||
Sbjct 67 ATGGCGGATGAAGTGATACTT-TTGGATTTTTGGCCGAGTCCATTCGGAGT-AAGAGCGA 124
Query 59 GGATTGCTCTAGAAGAGAAAAATGTCAT-A-TTCGATTACAGAGAACAAG-ATCTATG-G 114
| || || || | ||||| ||| | | | || || ||||||||| || ||| || |
Sbjct 125 GAATCGCGCT-G-AGAGAGAAAGGAGTTGAGTTTGAGTACAGAGAA-GAGAATC--TGAG 179
Query 115 A-AC-AGAAGCCCGATT-CTCCTCGAGATGAATCCGGTTCATAAGAAAATACCGGTTCTC 171
| || || ||||| || || ||| |||||||||||||||| ||||| || |||||||||
Sbjct 180 AGACAAG-AGCCC-TTTGCTTCTCCAGATGAATCCGGTTCACAAGAAGATTCCGGTTCTC 237
Query 172 ATCCACAATGGTAAACCGGTCTGTGAATC-ACTCATCCAAATGCAATACATCGACGAAGT 230
|||||||||||||||||||| |||||||| | | | | | || ||||||||||| ||
Sbjct 238 ATCCACAATGGTAAACCGGTTTGTGAATCCA-TGAACGTTGTTCAGTACATCGACGAGGT 296
Query 231 TTGG-CCTAGCAAAACCCCGCTTCTTCCTTCTGACCCTTACCAAAGAGCTCATGCCAAAT 289
|||| || | ||||| ||| | ||||||||||| |||||||| |||||||| |||| ||
Sbjct 297 TTGGTCCGA-CAAAAACCCAATCCTTCCTTCTGATCCTTACCAGAGAGCTCAAGCCAGAT 355
Query 290 TTTGGGGAGATTTCATCGACAAGAAGGTGTATGCTTCAGCGAGGTT-GATTTGGGGAGCG 348
|||||| |||||| | |||| ||| ||| || ||||| | | ||||||| | ||
Sbjct 356 TTTGGGTTGATTTCGTGGACACCAAGCTGTTTGAGCCAGCG-GATAAGATTTGGCAAACG 414
Query 349 AAAGGCGAAGAGCATGAGGCGGGGAAGAAGGAGT-TCATCGA-GATACTCAAGACACTAG 406
||||| || || || ||| | | ||||| |||| | || || | |||||||| || |
Sbjct 415 AAAGGAGAGGAACAAGAGACAGCCAAGAAAGAGTAT-ATAGAAGC-ACTCAAGATTCTTG 472
Query 407 AGTCTGAGCTTGGAGACAAAACTTACTTTGGAGGGGAAACATTCGG-TTATGTTGATATT 465
| ||||||||||||||||| |||||||||| || || || ||||| || || || |||
Sbjct 473 AAACTGAGCTTGGAGACAAACCTTACTTTGGTGGAGATACCTTCGGGTTC-GTAGACATT 531
Query 466 GCTC-TCATTGGATTTTACAGCTGGTTTGAAGCAT-ATGAGAAGTTTGGGAATTTCAACA 523
|| | | | ||||| |||||||||||| ||||||| | ||||| | | || |||| ||
Sbjct 532 GC-CATGACTGGATATTACAGCTGGTTCGAAGCATCA-GAGAAACTAGCTAACTTCAGCA 589
Query 524 TTGAAGTGGAGTGTCTAAAACTGATTGCTTGGGCTAAAAGATGTGTGAagagaga 578
| ||| ||||||| | |||||| |||| |||||| || ||| || |||||||
Sbjct 590 TCGAACCAGAGTGTCCCACACTGATGGCTTCGGCTAAGAGGTGTTTGCAGAGAGA 644
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 28583229643
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5