BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg911640 Length=546 Score E Sequences producing significant alignments: (Bits) Value AT1G18280.1 | Symbols: | Bifunctional inhibitor/lipid-transfer... 837 0.0 > AT1G18280.1 | Symbols: | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | chr1:6294333-6295364 FORWARD LENGTH=770 Length=770 Score = 837 bits (453), Expect = 0.0 Identities = 503/527 (95%), Gaps = 3/527 (1%) Strand=Plus/Plus Query 23 TCGCCGTCGCCGTCGTTCTTGTATTTTGCGCCGTTACGTCGTCTAATG--CACA-GACTA 79 ||||||||||||||||||||||||||||| ||||||||||||||||| || | |||| Sbjct 87 TCGCCGTCGCCGTCGTTCTTGTATTTTGCTACGTTACGTCGTCTAATGCTCAGATGACTT 146 Query 80 CACCACCGAGCGGCGTTGCAGGAGGAGATGCACACTCACTGCCGTGTATTCAGAAACTGA 139 ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| Sbjct 147 CACCACCGAGCGGCGGTGCAGGAGGAGACGCACACTCACTGCCGTGTATTCAGAAACTGA 206 Query 140 TGCCGTGTCAGCCGTATCTTCACTTGGTGACTCCGCCGCCGGCGTCGTGTTGCATGCCGT 199 ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct 207 TGCCGTGTCAGCCGTATCTTCACTTGGCGACTCCGCCGCCGGCGACGTGTTGCATGCCGT 266 Query 200 TGAATGAGATCGTAGCCAAAGACGCGACGTGTCTCTGCGCCGTCTTCAACAACGTCGATA 259 ||||||||||||||||||||||||| |||||||||||||| ||||| |||||||| |||| Sbjct 267 TGAATGAGATCGTAGCCAAAGACGCCACGTGTCTCTGCGCTGTCTTTAACAACGTTGATA 326 Query 260 TGCTCAAATCGCTTAACCTCACTAAAGAAAACGCTCTCGATCTCCCCAAAGCTTGTGGCG 319 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 327 TGCTCAAATCGCTTAACCTCACTAAAGAAAACGCTCTCGATCTCCCCAAGGCTTGTGGCG 386 Query 320 CCAAAGCTGACGTGTCACTATGCAAAACCAGCGCCGGAACTAATTCGTCTTCAACACCGC 379 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 387 CCAAAGCTGACGTGTCACTATGCAAAACCAGCGCCGGTACTAATTCGTCTTCAACACCGC 446 Query 380 CGGCAACCCCCAAAACTCCTCCAGCATCTTCCACCAGTACCGGAACAGGAAGCGGTTCAA 439 |||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct 447 CGGCAACCCCGAAAACTCCTCCGGCATCTTCCACCAGTACCGGAACAGGAAGCGGATCAA 506 Query 440 CCGGAGATGCAGCTTCTTCGACGGCCAAACCAACAAGCTCAGCTCCGGCCATCAACTTCG 499 ||||| |||||||| ||||||||||||| |||||||||||||| |||||||||||||||| Sbjct 507 CCGGAAATGCAGCTCCTTCGACGGCCAAGCCAACAAGCTCAGCCCCGGCCATCAACTTCG 566 Query 500 GTGGACTTAGCTTTGCATCGGCTGTCGTGGCAACACTCTTCTTCTGA 546 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 567 GTGGACTTAGCTTTGCATCGGCTGTCGTGGCAACACTCTTCTTCTGA 613 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 26171990587 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5