BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg911866 Length=723 Score E Sequences producing significant alignments: (Bits) Value AT1G20730.1 | Symbols: | Protein of unknown function (DUF833) ... 852 0.0 AT1G20740.1 | Symbols: | Protein of unknown function (DUF833) ... 645 0.0 > AT1G20730.1 | Symbols: | Protein of unknown function (DUF833) | chr1:7194256-7195575 FORWARD LENGTH=946 Length=946 Score = 852 bits (461), Expect = 0.0 Identities = 618/693 (89%), Gaps = 13/693 (2%) Strand=Plus/Plus Query 33 GTCAATAAGAGCGGCGGATTGGGAATGGGATGAAAGCAAGGTATTGAGTGCTCGTTGCGG 92 ||||||| || ||||| ||||||||||||||||||| |||||||||||| |||||||| Sbjct 81 GTCAATAGGAAAGGCGGCTTGGGAATGGGATGAAAGCCAGGTATTGAGTGGTCGTTGCGC 140 Query 93 AGAGACCGATGGGACGTGGTTAGGTATTTCTTTTCGAGGCCGAGTCGCTTTTCTTGTGGA 152 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 141 AGAGACCGATGGGACGTGGTTAGGTATTTCTATTCGAGGCCGAGTCGCTTTTCTTGTGGA 200 Query 153 GGCAGGGCCCGTTAACAGAGACAGAATCATCGGCGCCGAGCGTCGTACTCTTGAGTTCTT 212 |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct 201 GGCAGGGCCCGTTAACAGAGACAGAATCATCGGCGCCGAGTGTCGTACTCTTGATTTCTT 260 Query 213 AGAGAGCAACGAGAGTCCAGAGGACTTTGCAAAGTCATTAGCTGCAGAT-CGCGGACGTA 271 | |||||||| ||||||||||||||||||| | ||||| ||| |||| | |||||||| Sbjct 261 AAAGAGCAACTTGAGTCCAGAGGACTTTGCAGATTCATTGGCTTTAGATTC-CGGACGTA 319 Query 272 ACACGCAGATAGCCTATCATCTAATTGTGGCCGACATAGCTTCAAACTCAATGTTATATA 331 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||| |||| Sbjct 320 ACACGGGGATAGCCTATCATCTAATTGTGGCCGACATAGTTTCAAACTCAATGTTTTATA 379 Query 332 TCTCCAAACAGTCTTTCTCTGAAGATGGCACTG-TCCATATA-ATGCCTGTTGGTCCTGG 389 ||| ||||| |||||| ||||||||||||| || || ||| | | ||||||||||||||| Sbjct 380 TCTACAAACCGTCTTTGTCTGAAGATGGCA-TGGTCTATACAGA-GCCTGTTGGTCCTGG 437 Query 390 TGTTCATACCCTATCTTCAGCTGGACTCGATTCCGAAGTTGGACACAGGGAATTACGTCT 449 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 438 TGTTCATACCCTATCTTCAGCTGGACTCGATTCCGAAGTTGGACACAGGGACTTACGTCT 497 Query 450 GAAACAG-TCTTTTTCTGAGAGGATTAACAGAAAACTACCAGAGCAAATCT-GGGACCTT 507 ||||| | | |||||||||| ||||||||||| |||||||||| | ||||| ||| | || Sbjct 498 GAAAC-GCTATTTTTCTGAGCGGATTAACAGAGAACTACCAGAACCAATCTCGGGGC-TT 555 Query 508 GCTGAAGAGATTATGTATGAT-C-G-CGAAGCTATAATCGGAGACCCACTGAGCTCTATT 564 ||||| ||| ||||||||||| | | ||||||||||| ||||||||||||||||||||| Sbjct 556 GCTGAGGAGGTTATGTATGATACAGTCGAAGCTATAAACGGAGACCCACTGAGCTCTATC 615 Query 565 TTTGTCGACGACACTATGATTGAACACGAATACTATGGAACAAGAAATACGACAGCATTG 624 ||||||| ||||||| |||||||| ||||| |||||||||||||| ||||||||||||| Sbjct 616 TTTGTCGTCGACACTTTGATTGAAAACGAACACTATGGAACAAGATGTACGACAGCATTG 675 Query 625 GTTGTGAGACCCACCAAGGAAGTGTCGTTCGCTGAGAGGAACAGGGCGATATTTAATGCC 684 |||||||||| ||||| | ||||| |||| ||||||| ||||||||| |||||||| Sbjct 676 GTTGTGAGACGCACCATGCAAGTGAGGTTCTTTGAGAGGTACAGGGCGAGATTTAATGAT 735 Query 685 GATTGGACCATGCACGCCTTCTTTTTCACCATC 717 || |||| | |||||| |||| ||||||||| Sbjct 736 GACTGGAACGTGCACGACTTCCGGTTCACCATC 768 > AT1G20740.1 | Symbols: | Protein of unknown function (DUF833) | chr1:7200394-7201538 FORWARD LENGTH=801 Length=801 Score = 645 bits (349), Expect = 0.0 Identities = 597/712 (84%), Gaps = 36/712 (5%) Strand=Plus/Plus Query 33 GTCAATAAGAGCGGCGGATTGGGAATGGGA-TGAAA--G-CAAGGTATTGAGTGCTCGTT 88 |||||||||| |||||| |||| | | ||||| | | || |||| |||| ||||| Sbjct 105 GTCAATAAGAAAGGCGGAATGGG-TTAAAACTGAAACTGACCAGATATTAAGTGGTCGTT 163 Query 89 GCGGAGAGACCGATGGGACGTGGTTAGGTATTTCTTTTCGAGGCCGAGTCGCTTTTCTTG 148 || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 164 GCCCAGAGACCGATGGGACGTGGTTAGGTATTTCTACTCGAGGCCGAGTCGCTTTTCTTG 223 Query 149 TGGAGGCAGGGCCCGTTAACAGAGACAGAATCATCGGCGCCGAGCGTCGTACTCTTGAGT 208 ||||||||||| | |||||||||||||| ||| |||||||||| ||||||||||||||| Sbjct 224 TGGAGGCAGGGACTATTAACAGAGACAGATTCAACGGCGCCGAGAGTCGTACTCTTGAGT 283 Query 209 TCTTAGAGAGCAACGAGAGTCCAGAGGACTTTGCAAAGTCATTAGCTGCAGATCGCGGAC 268 |||||||||||||||||||||||||||||||||||||||||| ||||||||| | || Sbjct 284 TCTTAGAGAGCAACGAGAGTCCAGAGGACTTTGCAAAGTCATCGGCTGCAGATTACATAC 343 Query 269 GTAACACGCAGATAGCC---TATCATCTAATTGTGGCCGACATAGCTTCAAACTCAATG- 324 |||||| | | | |||| | ||||||||||||||||||||||||||||||||||||| Sbjct 344 GTAACAAGAACACAGCCGCCTTTCATCTAATTGTGGCCGACATAGCTTCAAACTCAATGC 403 Query 325 TTATATATCTCCAAACAGTC-TTTCTCTGAAGATGGCACTGTCCATATA-ATGCCTGTTG 382 || ||||||||||||| | | ||||||||| |||||| |||| ||| | | |||||||| Sbjct 404 TT-TATATCTCCAAACCG-CGTTTCTCTGACTATGGCATTGTCTATACAGA-GCCTGTTG 460 Query 383 GTCCTGGTGTTCATACCCTATCTTCAGCTGGACTCGATTCCGAAGTTGGACACAGGGAAT 442 ||||||||||||| || |||||||||||||||||||||||||| |||||| ||||||| | Sbjct 461 GTCCTGGTGTTCACACACTATCTTCAGCTGGACTCGATTCCGACGTTGGATACAGGGACT 520 Query 443 TACGTCTGAAACAGTCTTTTTCTGAGAGGATTAACAGA-AA--ACTACCAGAGCAAATCT 499 ||||| ||| ||| ||||||| ||||| |||||||||| || ||||||| ||| | Sbjct 521 TACGTATGAGACACTCTTTTTGTGAGATGATTAACAGAGAACGACTACCAC--CAA-TAA 577 Query 500 GGGACCTTGCTGAAGAGATTATGTATGATC--G-CGAAGCT-AT-AAT-CGGAGACCCAC 553 ||||| ||||||| || |||||||||||| | | ||||| | || || | | || Sbjct 578 GGGACATTGCTGA-GA--TTATGTATGATCCAGTCAAAGCTTACGAAAGCGT-G-CT-AC 631 Query 554 TGAGCTCTATTTTTGTCGACGACACT-ATGATTGAACACGAATACTATGGAACAAGAAAT 612 |||||||||||||| ||| ||||| | | ||||| | ||||| ||||||||||||||| | Sbjct 632 TGAGCTCTATTTTTTTCGTCGACA-TGAAGATTGGATACGAACACTATGGAACAAGAATT 690 Query 613 ACGACAGCATTGGTTGTGAGACCCACCAAGGAAGTGTCGTTCGCTGAGAGGAACAGGGCG 672 ||||||||||||||||||| || |||||||||||||| |||| ||||||| |||||| | Sbjct 691 ACGACAGCATTGGTTGTGAAACGCACCAAGGAAGTGTTGTTCTTTGAGAGGTACAGGGAG 750 Query 673 ATATTTAATGCCGATTGG-ACCATGCACGCCTTCTTTTTCACCATCATCTAG 723 |||||||||| |||||| || | |||| |||| ||||||||||||||| Sbjct 751 ATATTTAATGATGATTGGGACGAC-CACGACTTCGCGTTCACCATCATCTAG 801 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 35063434606 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5