BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg912037

Length=621
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT1G21980.1 | Symbols: ATPIP5K1, ATPIPK1, PIP5K1 | phosphatidyl...   442    2e-123


> AT1G21980.1 | Symbols: ATPIP5K1, ATPIPK1, PIP5K1 | phosphatidylinositol-4-phosphate 
5-kinase 1 | chr1:7734739-7738661 FORWARD 
LENGTH=2925
Length=2925

 Score =  442 bits (239),  Expect = 2e-123
 Identities = 310/342 (91%), Gaps = 13/342 (4%)
 Strand=Plus/Plus

Query  2    TGAGATTGAAGAACATTGTGAGTCGAGGAGTGGA-AGATTCTTCTCTGATGAGTGAATCa  60
            ||||||||| ||||||||||| ||||||| ||||  ||   ||||||||||||||| |||
Sbjct  267  TGAGATTGAGGAACATTGTGAATCGAGGACTGGAGTGAAGATTCTCTGATGAGTGATTCA  326

Query  61   gaagaagac---gaagaagaagaagctagtgaagtcattttaagcagaaacgtcgttgag  117
            |||||||||   |||||||||||||||||||||||||||||||||||   ||||||| ||
Sbjct  327  GAAGAAGACGAAGAAGAAGAAGAAGCTAGTGAAGTCATTTTAAGCAG---CGTCGTTCAG  383

Query  118  aagaagaagaagaagaatctgcgttttggtgaagaggaggaagaagagagacgagaCGGT  177
            |||||||||||||||||||||||||| |||   ||  | |||| ||||||||||||||||
Sbjct  384  AAGAAGAAGAAGAAGAATCTGCGTTTCGGT---GA--A-GAAGTAGAGAGACGAGACGGT  437

Query  178  TTGGTGTTGTTAGCTCAATCTACTCAAATGGTGAGATCGAGATCTCAAGGAACGACTCGG  237
            ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct  438  TTGGTGTTGTTAGCTCAATCTACTCCAATGGTGAGATCGAGATCTCAAGGAACGACTCGG  497

Query  238  CGCGTGACTCCCACGCCTTTAGTTGATGTTGAGAAGCCGCTACCGAACGGAGATCTCTAC  297
            ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||
Sbjct  498  CGCGTGACTCCCACGCCTTTAGTAGATGTTGAGAAGCCGCTACCAAACGGAGATCTTTAC  557

Query  298  ATCGGAAGCTTCTCCGGCGGGTTTCCACACGGATCCGGCAAG  339
            |||||||| |||||||| ||||||||||| |||||||| |||
Sbjct  558  ATCGGAAGTTTCTCCGGTGGGTTTCCACATGGATCCGGGAAG  599


 Score =  296 bits (160),  Expect = 2e-79
 Identities = 172/178 (97%), Gaps = 0/178 (0%)
 Strand=Plus/Plus

Query  340  AAACATGGTCATGGACAAAAGCGTTATGCAAATGGAGATTTTTATGAAGGTACTTGGAGA  399
            ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  789  AAACACGGACATGGACAAAAGCGTTATGCAAATGGAGATTTTTATGAAGGTACTTGGAGA  848

Query  400  AGGAATCTAAAAGATGGTAGAGGTAGGTATGTTTGGAGAAATGGGAATCAGTATACTGGA  459
            ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct  849  AGGAATCTACAAGATGGTAGAGGTAGGTATGTGTGGAGAAATGGGAATCAGTATACTGGA  908

Query  460  GAGTGGCGTAGCGGTGTGATTTCTGGGAAAGGTTTACTTGTTTGGCCTAATGGGAATC  517
            ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct  909  GAGTGGCGTAGTGGTGTGATTTCTGGGAAAGGTTTGCTTGTTTGGCCTAATGGGAATC  966



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 29939551612


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5