BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg912113
Length=1710
Score E
Sequences producing significant alignments: (Bits) Value
AT1G22570.1 | Symbols: | Major facilitator superfamily protein... 2538 0.0
AT1G22550.1 | Symbols: | Major facilitator superfamily protein... 1410 0.0
> AT1G22570.1 | Symbols: | Major facilitator superfamily protein
| chr1:7976620-7978573 REVERSE LENGTH=1698
Length=1698
Score = 2538 bits (1374), Expect = 0.0
Identities = 1602/1710 (94%), Gaps = 24/1710 (1%)
Strand=Plus/Plus
Query 1 ATGAAGATACCAGAGGAAGAAGTTACACTTCTT-GAAGATTATGTCAGTGATTCCGTCGA 59
|||||||||||||||||||||||| ||| |||| |||||||| || || |||||||||||
Sbjct 1 ATGAAGATACCAGAGGAAGAAGTTGCAC-TCTTAGAAGATTACGTTAGCGATTCCGTCGA 59
Query 60 CCACCGTGGATTGCCCGCCGGGAAATCTTCCACCGGTGGATGGAGATCCGCCTGGTTCAT 119
|||||||||||| |||||||| |||||||||||||| ||||||||||| |||||||||||
Sbjct 60 CCACCGTGGATTTCCCGCCGGAAAATCTTCCACCGGCGGATGGAGATCGGCCTGGTTCAT 119
Query 120 TATAGGTGTGGAAGTTGCAGAGAGGTTTGCTTACTTTGGTATTGCCTGCAATTTGATTAC 179
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 120 TATAGGTGTGGAAGTTGCAGAGAGGTTTGCTTACTTTGGGATTGCCTGCAATTTGATTAC 179
Query 180 TTACCTAACCGGACCGCTCGGACAATCGACGGCGACTGCTGCCGTGAACGTGAACACGTG 239
|||||| |||||||| ||||||||||||||||||| |||||||||||||||||||||||
Sbjct 180 TTACCTCACCGGACCTCTCGGACAATCGACGGCGAAAGCTGCCGTGAACGTGAACACGTG 239
Query 240 GTCGGGAACTGCCTCTATGCTTCCTATTTTAGGAGCTTTCGTAGCTGACGCTTATCTTGG 299
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 240 GTCGGGAACTGCCTCTATACTTCCTATTTTAGGAGCTTTCGTAGCTGACGCTTATCTTGG 299
Query 300 TCGTTACCGTACAATTATCGTAGCTTCCCTCATCTACATACTGGGGCTAGGATTATTGAC 359
|||||||||||| ||| ||||||||||||||||||||||| ||||||||||| |||||||
Sbjct 300 TCGTTACCGTACTATTGTCGTAGCTTCCCTCATCTACATATTGGGGCTAGGACTATTGAC 359
Query 360 ATTATCAGCTTCTTTAATCATAATGGGATTATCTGAGCAACGTAACAACGCTTCTGCTAA 419
||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct 360 GTTATCAGCTTCTTTAATCATAATGGGATTATCTAAGCAACGTAACGACGCTTCTGCTAA 419
Query 420 ACCATCTATTTGGATGAATACACTTTTCTTTTGTTCTCTGTATTTGGTGGCGATTGGACA 479
||||||||||||| | |||||||||||||| ||||||||||||||||||||||| |||||
Sbjct 420 ACCATCTATTTGGGTTAATACACTTTTCTTCTGTTCTCTGTATTTGGTGGCGATCGGACA 479
Query 480 AGGTGGACACAAACCGTGTGTTCAAGCGTTTGGTGCGGACCAGTTTGATGCTGAAGATCC 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 480 AGGTGGACACAAACCGTGTGTTCAAGCGTTTGGTGCGGACCAGTTTGATGCTGAAGATCC 539
Query 540 AAAGGAAGTAATAGCGAGAGGGTCGTTTTTCAATTGGTGGTTCTTGAGTTTATCTGCGGG 599
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 540 GAAGGAGGTAATAGCGAGAGGGTCGTTTTTCAATTGGTGGTTCTTGAGTTTATCTGCGGG 599
Query 600 AATAAGCTTATCGATTATTGTGGTCGCGTATGTTCAAGAAAATGTTAATTGGGCGTTTGG 659
||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 600 AATAAGCATATCGATTATTGTGGTCGCTTATGTTCAAGAAAATGTTAATTGGGCGTTTGG 659
Query 660 GTTTGGGATTCCTTGTTTGTTTATGGTTATGGCTCTTGCTATCTTCTTGCTCGGGAGGAA 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 660 GTTTGGGATTCCTTGTTTGTTTATGGTTATGGCTCTTGCTATCTTCTTGCTCGGGAGGAA 719
Query 720 GATATATAGATACCCTAAGGGGGGTCACGAGGATGTTAATAGTAGTAACACTTTTACTAG 779
||||||||||||||| ||||| ||| ||||| ||||||||||||||||| ||| | |
Sbjct 720 GATATATAGATACCCAAAGGGACATCATGAGGAGGTTAATAGTAGTAACAC-TTT--T-G 775
Query 780 TAACACTTTTGCCAGAATCGGTAGAGTTTTTGTTGTTGCGTTCAAGAATCGGAAACTGAG 839
|| ||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 776 ---CA--------AGAATCGGTAGAGTTTTTGTTATTGCGTTCAAGAATCGGAAACTGAG 824
Query 840 GTTAGAACATTCTGGTTTGGGTTTGGATCAAGGTCTATTGGAGGATGGTCAGTCCGAGAA 899
||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 825 GTTAGAACATTCTAGTTTGGAATTGGATCAAGGTCTATTGGAGGATGGTCAGTCCGAGAA 884
Query 900 ACGTGAAGGTCGGCTCAATTTCCTAGCAAAAGCAATGATCTCAAGAGAAGAAGGTGCAGA 959
|||| ||| ||||||||||||||||||||||||||||||||| | || |||||||| ||
Sbjct 885 ACGTAAAGATCGGCTCAATTTCCTAGCAAAAGCAATGATCTC-A-AG-AGAAGGTGTTGA 941
Query 960 GCCATGTAGTGGTAGGGACGTGGAAGACGCCAAGGCTTTGGTAAGGCTTATTCCGATATG 1019
|||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct 942 GCCATGTAGTGGTAGGGACGTGGATGACGCGAAGGCTTTGGTAAGGCTTATTCCGATATG 1001
Query 1020 GATCACAT-CGGTTGTGAGCACGATTCCGTACGCTCAATACATTACTTTCTTTACGAAGC 1078
|||||||| | || ||||||||||||||||||||||| ||||| |||||||| |||||||
Sbjct 1002 GATCACATAC-GTGGTGAGCACGATTCCGTACGCTCAGTACATAACTTTCTTCACGAAGC 1060
Query 1079 AAGGTGTCACGGTGGACAGAAGAATCTTACCGGGCGTAGAAATCCCAGCGGCTTCTTTAT 1138
|||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct 1061 AAGGGGTCACGGTGGACAGAAGAATCTTACCGGGAGTAGAAATTCCAGCGGCTTCTTTAT 1120
Query 1139 TGTCATTCATCGGTGTATCGATTCTCATCTCAGTGCCGATCTATGAGCGTGTATTTCTCC 1198
|||||||| | |||||||| ||||||||||||||||| | |||||||||||||||||||
Sbjct 1121 TGTCATTCGTTGGTGTATCTATTCTCATCTCAGTGCCCCTATATGAGCGTGTATTTCTCC 1180
Query 1199 CGATAGCCA-GAATGATTACCAAAAAGCCTTTTGGGATCACAATGCTCCAGAGAATAGGA 1257
||||||| | ||| |||||||||||||||||||||||||||||||||||| || ||||||
Sbjct 1181 CGATAGCTAGGAA-GATTACCAAAAAGCCTTTTGGGATCACAATGCTCCAAAGGATAGGA 1239
Query 1258 ACTGGAATGGTGCTTTCAGTCTTCAATATGATGCTCGCGGCATTGGTAGAAACGAAACGG 1317
||||||||||||||||||||||||||||||||||||| ||||| |||||| | ||||||
Sbjct 1240 GCTGGAATGGTGCTTTCAGTCTTCAATATGATGCTCGCTGCATTAGTAGAATCAAAACGG 1299
Query 1318 CTAAATATTGCTAGGGAACACGGGCTCGTGGACAAGCCGGACGCGACCGTTCCAATGTCC 1377
||||| || ||||||||||||||||| |||||||||||||||| ||||||||||||||||
Sbjct 1300 CTAAAAATCGCTAGGGAACACGGGCTAGTGGACAAGCCGGACGTGACCGTTCCAATGTCC 1359
Query 1378 ATATGGTGGTTCGTCCCTCAGTATTTGCTACTCGGGATGATCGATGTGTTCTCTCTGGTG 1437
||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct 1360 ATATGGTGGTTCGTCCCTCAGTATTTGCTACTCGGGATGATCGATCTGTTCTCTATGGTG 1419
Query 1438 GGAACACAAGAATTCTTCTACGACCAAGTCCCAACGGAGCTAAGGAGCATTGGTCTCTCG 1497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1420 GGAACACAAGAATTCTTCTACGACCAAGTCCCAACGGAGCTAAGGAGCATTGGTCTCTCG 1479
Query 1498 CTATCTTTGAGTGCGATGGGTCTTTCGAGCTTCTTGAGTGGTTTTCTCATCACTGTGATT 1557
|| ||| ||||||||||||||||||| ||||||||||||||||||||||||| | |||||
Sbjct 1480 CTTTCTCTGAGTGCGATGGGTCTTTCAAGCTTCTTGAGTGGTTTTCTCATCAGTTTGATT 1539
Query 1558 GATTGGGCTACCGGAAAAGACGGCTGGTTCAACACTAACCTGAACCGAGCCCATGTCGAT 1617
||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||| |||
Sbjct 1540 GATTGGGCTACGGGAAAAGACGGCTGGTTCAACTCTAACTTGAACCGAGCCCATGTGGAT 1599
Query 1618 TACTTTTATTGGTTACTCGCCGCTTTCACAGCCATTGCTTTCTTTGCGTTCTTGTTCATC 1677
|||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct 1600 TACTTTTATTGGTTGCTCGCTGCTTTCACGGCCATTGCTTTCTTTGCGTTCTTGTTCATC 1659
Query 1678 TCCAAGATGTATGTGTATCGTCGGCTAGAC 1707
||||||||||||||||||||||||||||||
Sbjct 1660 TCCAAGATGTATGTGTATCGTCGGCTAGAC 1689
> AT1G22550.1 | Symbols: | Major facilitator superfamily protein
| chr1:7966533-7968641 REVERSE LENGTH=1859
Length=1859
Score = 1410 bits (763), Expect = 0.0
Identities = 1426/1732 (82%), Gaps = 101/1732 (6%)
Strand=Plus/Plus
Query 6 GATA-CCAGAGGAAGAAGTTACACTTCTTGAAGATTATGTCAGTGATTCCGTCGACCACC 64
|||| || || ||||||| | ||||| | ||||||| ||||| || ||||| |||||||
Sbjct 95 GATAGCC-GAAGAAGAAGCTGCACTTATAGAAGATTCCGTCAGCGACTCCGTTGACCACC 153
Query 65 GTGGA-TTGCCCGCCGGGAAATCTTCCACCGGTGGATGGAGATCCGCCTGGTTCATTATA 123
||||| || || ||||| |||||||||||||| ||||||||||||||||||| |||||||
Sbjct 154 GTGGACTT-CCTGCCGGAAAATCTTCCACCGGCGGATGGAGATCCGCCTGGTACATTATA 212
Query 124 GGTGTGGAAGTTGCAGAGAGGTTTGCTTACTTTGGTATTGCCTGCAATTTGATTACTTAC 183
||||||||||||| ||| || |||||||||||||| |||| | ||| || |||||||||
Sbjct 213 GGTGTGGAAGTTGGAGAAAGATTTGCTTACTTTGGGATTGGTTCCAACTTAATTACTTAC 272
Query 184 CTAACCGGACCGCTCGGACAATCGACGGCGACTGCTGCCGTGAACGTGAACACGTGGTCG 243
|| |||||||| ||||||||||| || || || || ||||||||||||||||| |||||
Sbjct 273 CTCACCGGACCTCTCGGACAATCAACAGCCACCGCCGCCGTGAACGTGAACACATGGTCA 332
Query 244 GGAACTGCCTCTATGCTTCCTATTTTAGGAGCTTTCGTAGCTGACGCTTATCTTGGTCGT 303
||||| ||||| || |||||| |||||||||||||| | || || |||||||||||||||
Sbjct 333 GGAACCGCCTCGATACTTCCTGTTTTAGGAGCTTTCATTGCAGATGCTTATCTTGGTCGT 392
Query 304 TACCGTACAATTATCGTAGCTTCCCTCATCTACATACTGGGGCTAGGATTATTGACATTA 363
|||||||| ||| | || |||||||||||||||||||| || |||||| ||||||| |||
Sbjct 393 TACCGTACCATTGTTGTTGCTTCCCTCATCTACATACTTGGACTAGGACTATTGACCTTA 452
Query 364 TCAGCT-TCTTTAATCATAATGGGATTATCTGAGCAACG------TAA---CAACGCTTC 413
|| || || |||||| ||||||||||||| |||||||| ||| |||||||||
Sbjct 453 TCCTCTATC-TTAATCCTAATGGGATTATCGGAGCAACGTCAACATAACCGCAACGCTTC 511
Query 414 TGCTAAACCATCTATTTGGATGAATACACTT-TTCTTTTGTTCTCTGTATTTGGTGGCGA 472
||||||||| | | ||||| |||||| | || ||||||||||||||||||||||||||||
Sbjct 512 TGCTAAACCGTTTTTTTGGGTGAATATA-TTATTCTTTTGTTCTCTGTATTTGGTGGCGA 570
Query 473 TTGGACAAGGTGGACACAAACCGTGTGTTCAAGCGTTTGGTGCGGACCAGTTTGATGCTG 532
| |||||||| |||||||| || ||||||||||| |||||||| ||||||||||||| ||
Sbjct 571 TCGGACAAGGCGGACACAAGCCATGTGTTCAAGCTTTTGGTGCTGACCAGTTTGATG-TG 629
Query 533 A-AGATCCAAAGGA-AGTAATA-GCGAGAGGGTCGTTTTTCAATTGGTGGTTCTTGAGTT 589
|||||||||||| || |||| | ||||| ||||||||||||||||||||||||||||
Sbjct 630 GGAGATCCAAAGGAGAG-AATAAGT-AGAGGATCGTTTTTCAATTGGTGGTTCTTGAGTT 687
Query 590 TATCTGCGGGAATAAGCTTA-TCGATTATTGTGGTCGCGTATGTTCAAGAAAATGTTAAT 648
|||| |||||||||| ||| |||||||||||||| | || |||||||| |||||||||
Sbjct 688 TATCCGCGGGAATAA-CTTTGTCGATTATTGTGGTGGTTTACGTTCAAGACAATGTTAAT 746
Query 649 TGGGCGT-TTGGGTTTGGGATTCCTTGTTTGTTTATGGTTATGGCTCTTGCTATCTTCTT 707
||||| | |||||||||| || ||||||||||| ||||| |||||||||||| |||||||
Sbjct 747 TGGGC-TCTTGGGTTTGGTATCCCTTGTTTGTTCATGGTCATGGCTCTTGCTCTCTTCTT 805
Query 708 GCTCGGGAGGAAGA-TATATAGATACCCTAAGGGGGG-TCACGAGGATGTTAATAGTAGT 765
| | || || || | | |||||||| || ||| || | || ||||| | || | | |
Sbjct 806 GTTTGGAAGAAAAACT-TATAGATATCC-AAGAGGAGATCGCGAGGG-G--AAGA--A-T 857
Query 766 AACACTTTTACTAGTAACACTTTTGCCAGAATCGGTAGAGTTTTTGTTGTTG-CGTTCAA 824
||| ||||| | | | | || ||||||||||||| ||| || |||||||
Sbjct 858 AACGCTTTTGC--G-A--------G---GA-TCGGTAGAGTTTTC-TTGGTGGCGTTCAA 901
Query 825 GAATCGGAAACTGAGGTTAGA-ACATTCTGGTTTGGGTTTGGATCAAGGTCTATTGGAGG 883
|||||||||||||| |||| | |||||| ||| | || ||| | | | | ||
Sbjct 902 GAATCGGAAACTGAAGTTA-ACACATTCAGGTCAG--TT-GGA--A-G-T-T---GG--- 946
Query 884 ATGGTCAGTCCGAGAAACGTGAAGGTCGGCTCAATTTCCTAGCAAAAGCAATGAT-CTCA 942
| || || | ||||| || |||| | || | |||||||||||||| || | | ||
Sbjct 947 -T--TC-GTACAAGAAATGTAAAGGACAACTTGAGTTCCTAGCAAAAGCGTTGCTAC-CA 1001
Query 943 AGAGAAGAAGGTGCAGAGCCATGTAGTGGTAGGGACGTGGAAGACGCCAAGGCTTTGGTA 1002
|||||| ||||| ||||||||||||| ||||||||||||||||||| | |||||||||
Sbjct 1002 GGAGAAGGAGGTGTAGAGCCATGTAGTAGTAGGGACGTGGAAGACGCGATGGCTTTGGTT 1061
Query 1003 AGGCTTATTCCGATATGGATCACATCGGTTGTGAGCACGATTCCGTACGCTCAATACATT 1062
|||||||||||||||||||||||||| || |||||||||||||| ||||||||||| |
Sbjct 1062 AGGCTTATTCCGATATGGATCACATCAGTAGTGAGCACGATTCCTTACGCTCAATATGCT 1121
Query 1063 ACTTTCTTTACGAAGCAAGGTGTCACGGTGGACAGAAGAATCTTACCGGGCGTAGAAATC 1122
|||||||| || || ||||| || ||||||||||||| |||||| ||||| | || |||
Sbjct 1122 ACTTTCTTCACAAAACAAGGCGTTACGGTGGACAGAAAAATCTTGCCGGGTTTCGAGATC 1181
Query 1123 CCAGCGGCTTCTTT--ATTGTCATTCATCGGTGTATCGATTCTCATCTCAGTGCCGATCT 1180
|| |||||||||| | | || |||||||| |||||||| |||||||||| || | ||
Sbjct 1182 CCTCCGGCTTCTTTTCAA-G-CACTCATCGGTTTATCGATTTTCATCTCAGTTCCAA-CT 1238
Query 1181 -ATGAGCGTGTATTTC-TCCCGATAGCCAGAATGATTACCAAAAAGCCTTTTGGGATCAC 1238
|||||||||| |||| | ||| |||| ||| |||||||||||||||||| ||||||||
Sbjct 1239 TATGAGCGTGT-TTTCCTTCCGTTAGCTAGATTGATTACCAAAAAGCCTTCAGGGATCAC 1297
Query 1239 AATGCTCCAGAGAATAGGAACTGGAATGGTGCTTTC-AGTCTTCAATATGATGCTCGCGG 1297
|||||| || ||||||||| ||||||||||||| || || ||| |||||| || | || |
Sbjct 1298 AATGCTACAAAGAATAGGAGCTGGAATGGTGCTCTCCAG-CTTAAATATGGTGGTTGCAG 1356
Query 1298 CATTGGTAGAAACGAAACGGCTAAATATTGCTAGGGAACACGGGCTCGTGGACA-AGCCG 1356
| || ||||||| ||||||||| | | |||| ||||| ||||| ||||| | | |||
Sbjct 1357 CGTTAGTAGAAATGAAACGGCTCGAGACGGCTAAAGAACATGGGCTTGTGGATAGA-CCG 1415
Query 1357 GACGCGACCGTTCCAATGTCCATATGGTGGTTCGTCCCTCAGTATTTGCTACTCGGGATG 1416
||||| ||| | ||||||||||||||||||||||| ||||||||||| ||||| ||||||
Sbjct 1416 GACGCAACCATCCCAATGTCCATATGGTGGTTCGTTCCTCAGTATTTACTACTTGGGATG 1475
Query 1417 ATCGATGTGTTCTCTCTGGTGGGAACACAAGAATTCTTCTACGACCAAGTCCCAACGGAG 1476
|||||||| ||||| || ||||| ||||||||||||||||||||||| ||||| ||||||
Sbjct 1476 ATCGATGTATTCTCACTAGTGGGGACACAAGAATTCTTCTACGACCAGGTCCCCACGGAG 1535
Query 1477 CTAAGGAGCATTGGTCTCT-CGCTATCTTTGAGTGCGATGGGTCTTTCGAGCTTCTTGAG 1535
|||||||| |||||||| | | || ||||||||||||||||||||| |||||||||||||
Sbjct 1536 CTAAGGAGTATTGGTCT-TGCACTTTCTTTGAGTGCGATGGGTCTTGCGAGCTTCTTGAG 1594
Query 1536 TGGTTTTCTCATCACTGTGATTGATTGGGCTACCGG-AAAA--GACGGC--T-G--G-TT 1586
|||||||| |||||||||||| ||||||||||||| |||| | |||| | | | ||
Sbjct 1595 CGGTTTTCTAATCACTGTGATTAATTGGGCTACCGGGAAAAATGGCGGCGATAGCTGGTT 1654
Query 1587 CAACACTAACCTGAACCGAGCCCATGTCGATTACTTTTATTGGTTACTCGCCGCTTTCAC 1646
||| |||||||||||| |||||||||||||||| ||||| ||||| || || ||||||||
Sbjct 1655 CAATACTAACCTGAACAGAGCCCATGTCGATTATTTTTACTGGTTGCTTGCTGCTTTCAC 1714
Query 1647 AGCCATTGCTTTCTTTGCGTTCTTGTTCATC-TCCAAGATGTATGTGTATCG 1697
||||||| ||||| ||||| ||||| || |||| | |||||||||||||
Sbjct 1715 TGCCATTGGGTTCTTGGCGTTTTTGTT-ATTATCCAGGCTGTATGTGTATCG 1765
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 84537717780
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5