BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg912296 Length=309 Score E Sequences producing significant alignments: (Bits) Value AT1G27250.1 | Symbols: | Paired amphipathic helix (PAH2) super... 448 2e-125 > AT1G27250.1 | Symbols: | Paired amphipathic helix (PAH2) superfamily protein | chr1:9468568-9469634 FORWARD LENGTH=414 Length=414 Score = 448 bits (242), Expect = 2e-125 Identities = 278/295 (94%), Gaps = 4/295 (1%) Strand=Plus/Plus Query 1 ATGGTGGGAGGAGGAAGTAAACATGTTGGAGAAGGAAGTAAACCGAAGGCAAATATAGAT 60 |||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||| Sbjct 1 ATGGTGGGAGGAGGAAGTAAACATGTTGGAGAAGGAAGTAAACCGAGGGCAACTAAAGAT 60 Query 61 GATGCGTATGCATATCTTAGGGCTGTGAGGGCTAGATTTCATAATGATAGTAAAAAATAT 120 || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 61 GACGCGTATGCATATCTTAGGGCTGTGAGGGCTAAATTTCATAATGATAGTAAAAAATAT 120 Query 121 GATGACTTTGTTACTGTCATGA-ATAATTTTAAAGCTCGAAGAATTGATAGGGATGGTTG 179 || || |||||| | ||||||| | ||||||||||||||||||||||||||||||||||| Sbjct 121 GACGATTTTGTTGCGGTCATGACA-AATTTTAAAGCTCGAAGAATTGATAGGGATGGTTG 179 Query 180 CATAAAAGAGGTGGAACAACTGCTTAAAGGACATCGAGATTTGATTTCTGGTTTTAATGC 239 |||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||| Sbjct 180 CATAAAAGAGGTGGAACAACTGCTTAAAGGACATAGAGATTTGATTTCGGGTTTCAATGC 239 Query 240 ATTCTTACCAAAGTGTTTGGAGATCAAAAATTATTA-TATTGGGGCAGGAGAGGA 293 |||||||||||||||||||||||| ||||||||||| | |||||||||||||||| Sbjct 240 ATTCTTACCAAAGTGTTTGGAGATAAAAAATTATTACT-TTGGGGCAGGAGAGGA 293 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 14326308465 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5