BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg912327
Length=7857
Score E
Sequences producing significant alignments: (Bits) Value
AT4G30990.2 | Symbols: | ARM repeat superfamily protein | chr4... 2082 0.0
AT1G64385.1 | Symbols: | unknown protein; FUNCTIONS IN: molecu... 56.5 4e-06
> AT4G30990.2 | Symbols: | ARM repeat superfamily protein | chr4:15084098-15097920
FORWARD LENGTH=8101
Length=8101
Score = 2082 bits (1127), Expect = 0.0
Identities = 2097/2549 (82%), Gaps = 131/2549 (5%)
Strand=Plus/Plus
Query 3351 TGATAAAGAGACTGTTTCAACAAATCACGACCAGGCTGGCACTTCTTTGAAGCAGTTTAA 3410
||||||||| | || ||||| |||||||||||||||||||||| |||| |||||||||||
Sbjct 3571 TGATAAAGAAAATGCTTCAATAAATCACGACCAGGCTGGCACTGCTTTTAAGCAGTTTAA 3630
Query 3411 TGAGTTTAGATCCTTATGTCTGAAGATTTTTGCTCTTGTTCTTGATAAGTATAAGGATTG 3470
||||| ||||||||||||||||| || |||||| |||||||||||| || |||||||
Sbjct 3631 AGAGTTGAGATCCTTATGTCTGAAAATCATTGCTCATGTTCTTGATAAATACGAGGATTG 3690
Query 3471 TGATTTTGGCTCTGAGTTCTGGGACCTCTTCTTTTCAGCAGTGAACCCCTTAATTAAGAG 3530
|||| ||||||| |||||||||||||||||||||||||| |||| || |||||||||||
Sbjct 3691 TGATCTTGGCTCCGAGTTCTGGGACCTCTTCTTTTCAGCTGTGAGTCCGTTAATTAAGAG 3750
Query 3531 TTTTAAGCAGGAGGGTTCTAGTAGTCAGAAACCAAGCTCATTGTTCAAATGCTTCTTGTC 3590
||| ||||||||||||||||||||| |||||||||| || |||||| ||||||||||||
Sbjct 3751 TTTCAAGCAGGAGGGTTCTAGTAGTGAGAAACCAAGTTCCTTGTTCTCATGCTTCTTGTC 3810
Query 3591 AATGAGTAAAAGTCGCAATCTCGTG-ACCTTCTTATGCCGGGAAGAGTTCCTTATTCCAG 3649
|||||||||||| || ||||||||| | | ||||||| |||||||||| |||| ||||||
Sbjct 3811 AATGAGTAAAAGCCGTAATCTCGTGAATC-TCTTATGTCGGGAAGAGTCCCTTGTTCCAG 3869
Query 3650 ACATTTTTTCAATTCTAACAGTCACCACAGCTTCAAAAGATATAAAGTCTTCTACCTTGA 3709
||||||||||||||||||| |||||||| |||||| ||| ||||||||||||| ||||||
Sbjct 3870 ACATTTTTTCAATTCTAACTGTCACCACGGCTTCAGAAGCTATAAAGTCTTCTGCCTTGA 3929
Query 3710 AGTTCATAGAGAATCTACTCAGTCTTGACAATGAGTTGGATGAGGATGACCATATGATCA 3769
||||||| |||||||| || |||||||||||| ||||| ||||||||| ||||||||
Sbjct 3930 AGTTCATTGAGAATCTGCTTTGTCTTGACAATGTGTTGGGTGAGGATGAAAATATGATCC 3989
Query 3770 AAGGATTCTTAGATCCATATATCGAGGCACTGATTAACAGCTTGCATTCTCTTTTCCTTG 3829
|||||| ||||||| ||||| || |||||||||||||||||||||||||||||| |||
Sbjct 3990 GTGGATTCGTAGATCCGTATATAGAAGCACTGATTAACAGCTTGCATTCTCTTTTCATTG 4049
Query 3830 GGGATATTTTGAAAAGGAAATCAATCAAGTATCATGGAAAAAGAGAGATTAAGATTCTTA 3889
||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||
Sbjct 4050 GGGATATTTTGAAAAGGAAATCAGTCAAGTATCATGGGGAAAGAGAGATTAAAATTCTTA 4109
Query 3890 AACTATTGTCTAAGCACATCCGAGATGGTTCTTC-TGTTATGAAGTATTTGGATGTCTTG 3948
|| ||||||| |||| || | |||| | || | |||||||||||||||||||||||||
Sbjct 4110 AATTATTGTCAAAGCGTATGCAAGATCGCTC-CCATGTTATGAAGTATTTGGATGTCTTG 4168
Query 3949 CTGTCTTTTTTGGATGACAGTGTGAAAGATTCTGATATTCATCGTGAGGCTTTGCAAGCC 4008
|||||||| ||| || | ||||| |||||| ||||||| | |||||| ||||||| || |
Sbjct 4169 CTGTCTTTCTTGAATAAAAGTGTTAAAGATCCTGATATCCGTCGTGAAGCTTTGCTAG-C 4227
Query 4009 ATTCATTCATTGCTTGGGACTGAGAGTACCACATCATCGCTTGGGACT-GAGAGTACCAG 4067
|||||| |||| | | || | | | ||||||| | |||||||||||
Sbjct 4228 ---CATTCA-------GGAC----A-T--CATAGCGTATCTTGGGA-TGGAGAGTACCAG 4269
Query 4068 C-AGAATTATTAAGATAGTGTCTCCTCTTCTTGTTGATGCTGAAAGTAATGTTAGATTAT 4126
| || ||||| || | ||| |||||||| ||||||||||||||| | ||||||||||||
Sbjct 4270 CAAG-ATTATAAATACAGTCTCTCCTCTACTTGTTGATGCTGAACTTGATGTTAGATTAT 4328
Query 4127 GCATTTGTGATCTTCTTGAATCTCTTGCAAAATTCGACCTTTCTCTGGATCTTGTGGCCA 4186
||||||||||||||||||| |||||||||||| ||||| |||| |||||| ||||| ||
Sbjct 4329 GCATTTGTGATCTTCTTGAGTCTCTTGCAAAAATCGACTTTTCACTGGATGATGTGG-CA 4387
Query 4187 AATGC--GTCCGCGATATGAATTCCAGATCACCCATGGAAGTTGATGATCTTGACTATGA 4244
|| || ||||||||||||||| ||| ||| | |||||||||||||| |||||||||||
Sbjct 4388 AA-GCGTGTCCGCGATATGAATGCCATCTCAGCTATGGAAGTTGATGACCTTGACTATGA 4446
Query 4245 AAAGATAATTGATGCTTATG-GGAAGATTGATGTAGATTTCTTTAATAAATCCTCGGAGC 4303
||||||| || |||| |||| || ||||| ||| ||||||||||| ||||||||| ||||
Sbjct 4447 AAAGATAGTTAATGCCTATGTGG-AGATTAATGCAGATTTCTTTATTAAATCCTCAGAGC 4505
Query 4304 AGCACGTGATGATCATACTCTCACAGAGTATATACAACATATCATCAGAAGAGCTTACGT 4363
|||| |||||| |||||||||| ||| | | | ||| | | | ||| | |
Sbjct 4506 AGCATACGATGATTATACTCTCAC--AGT-CCT-C-A-ATA-C-TTTGCCGAG---AAGC 4554
Query 4364 TAAAGGATAGCGCACCCTCAATACTTTGCCAAGAGGTTGTAAAA-TCTGATGCAAGATGG 4422
| ||| ||| || ||| || | |||||| | |||| |||||| ||| |||
Sbjct 4555 T-----CCAGCTCACTCTGAAT--TTGGAAAAGAGG-TCAAAAACGCTGATGTAAGCTGG 4606
Query 4423 ACAGGAGATCGTATATTGTGGATTATGA-ATAAGTTTATACTGAAACACATTGGAGATGC 4481
|||||||||||| || |||| ||| ||| | || ||||| |||||||||||||||||||
Sbjct 4607 ACAGGAGATCGTGTACTGTGCATTTTGAGA-AATTTTATTTTGAAACACATTGGAGATGC 4665
Query 4482 GATAAACAGA---GGAATTTCTTGTGGAAAgggggggATTCTTTTGATACACAAAATGGT 4538
||||||||| || | || | | ||||| ||||||||||||||| | | |||||
Sbjct 4666 AATAAACAGAGGGGGCA-TTATAAT--AAAGGAATGGATTCTTTTGATACGCGAGATGGT 4722
Query 4539 GGCTACACTTCCAGATGCCGGAAATCTTTCTGCATTCAGACCTTTATGCTCAGAAGACGA 4598
| | | |||||||||||||| |||||||||||||||||||||| ||||||| ||||||||
Sbjct 4723 GACCAAACTTCCAGATGCCGCAAATCTTTCTGCATTCAGACCTCTATGCTCTGAAGACGA 4782
Query 4599 CGAA-GTGGATTTCTTTAAAAAC-ATT-TTCAGCATTCAGGCACATCGTAGAGCAAATGC 4655
||| || ||||| ||| ||| | ||| |||| |||||||||||| |||||||| | ||
Sbjct 4783 -GAATGTAGATTT-TTTTAAAGCTATTGTTCA-CATTCAGGCACACCGTAGAGCTAGGGC 4839
Query 4656 AATTAAACGTTTCACAAGGGTGATCAAAGATAGCAGTCTGCCTGAGGGAGTAGTGAGAAA 4715
|||| |||||||| || ||| | |||||||||||||||||||||||||||||||||||
Sbjct 4840 AATTTCACGTTTCAGTAGTGTGGTTAAAGATAGCAGTCTGCCTGAGGGAGTAGTGAGAAA 4899
Query 4716 AGTTTTGGTCTCAGTCTTTTTCAACATGTTGCTTGATGGAAAAGATGAAAAAGGGAAAAA 4775
| |||||||||| ||||||||||| ||||| || || ||| |||||| ||||| || ||
Sbjct 4900 ACTTTTGGTCTCGGTCTTTTTCAATATGTTACTCGAAGGACAAGATGGAAAAGATAATAA 4959
Query 4776 TGTCCA-AGATGCATGCAAAGAAGCCCTTGCATCTATATCTGCTCATATGAGTTGGACGT 4834
||| || | ||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct 4960 TGT-CAGAAATGCATGCACAGAAGCCCTTGCATCTATATCTGCTCATATGAGTTGGACAT 5018
Query 4835 CGTACTATGCTCTATTGAATCGGTGTTTCC-ATGAGATGAACAAGCATACCGATAA-GAA 4892
||||||||||| || ||||||||||||||| | |||||||||||||| ||| | || | |
Sbjct 5019 CGTACTATGCTTTACTGAATCGGTGTTTCCGA-GAGATGAACAAGCACACCAAAAAAGGA 5077
Query 4893 AAAACTTCTGCTGC-AGCTTATCAGCTTGATTTTAAATAACTTTTACTTTT-CAAAAGAT 4950
|||| ||||||||| | |||||| |||||||||| |||| ||| | |||| ||||||||
Sbjct 5078 AAAA-TTCTGCTGCGA-CTTATCTGCTTGATTTTGGATAAATTTCA-TTTTGCAAAAGAT 5134
Query 4951 GGTTACACGCAGGAGGCT-ATGGAGATTAGGACTCGCATTGAGAAAAGCGTTTTCCCGAA 5009
|| ||| | || |||||| | ||| ||||||||| || || |||||| || |||||||
Sbjct 5135 GGCTACCCACATGAGGCTGA-GGAAATTAGGACTTGCCTTCAGAAAATTGTGTTCCCGAG 5193
Query 5010 GATACAGAAGCAGATGGATTCTGACGATGATAGTGTTAATGTTGACAGCTAC-GTGGCTG 5068
||| ||||||| |||| ||||||| ||||| |||||||||| |||| || |||||||
Sbjct 5194 GATGCAGAAGCTGATGAATTCTGATTCTGATAATGTTAATGTTAACAG-TAGTGTGGCTG 5252
Query 5069 CGGTGAAGGTTCTAAAGCTTCTCCCC-AACGAAATAATGGACCCACAGCTAG-ACTCTAT 5126
|| | |||||||||||||| ||||| || || || ||||| || | ||| | |||||
Sbjct 5253 CGCTTAAGGTTCTAAAGCTACTCCCTGAA-GATGTATTGGACTCAAACCTATCA-TCTAT 5310
Query 5127 AGTTC-CTAAAATTTGC-AGTTATTTGACGAATGGGTTGGAGAGCACACGTGATAAAGCC 5184
||||| | |||||| || |||| ||| | ||| |||||||||||||||||||| |||||
Sbjct 5311 AGTTCAC-AAAATT-GCCAGTTTTTTAAAGAACCGGTTGGAGAGCACACGTGATGAAGCC 5368
Query 5185 AGAAAGGCTCTTGCTGCTTGTGTGGAGGAACTTGGGCTAGAGTACCTGCAATTTGTTGTA 5244
||| |||||| | ||||||| || | ||||||||||| |||||| ||||| |||| ||
Sbjct 5369 AGATTGGCTCTGGTTGCTTGTTTGAAAGAACTTGGGCTGGAGTACTTGCAAGTTGTAGTC 5428
Query 5245 AAAAATTTACGTGCTAGGTTAACACGAGGATATGAGGTGCATGTTCTAGGATTCACTGTC 5304
|| | ||||||||||| |||| |||||||| |||||||||||| || || | |||| ||
Sbjct 5429 AACATTTTACGTGCTATCTTAAAACGAGGATCTGAGGTGCATGTGCTGGGGTACACTCTC 5488
Query 5305 AATTTTATCTTATCAAAATGCGTGTCCAATTCTACGGGTGGGAAGTTGGATCATTGTTTG 5364
|||| |||||||||||| ||| |||||||| |||| |||||||||| ||||||||||||
Sbjct 5489 AATTCTATCTTATCAAAGTGCTTGTCCAATCCTACATGTGGGAAGTTAGATCATTGTTTG 5548
Query 5365 GGAGATCTCCTTGCTGTGGTA-AAAGCCGATATCCTTGAAGATGTTGATGACCAGAAAGA 5423
| ||||||||||||||||| ||| |||||||||||| ||| |||| ||| ||||||||
Sbjct 5549 GTTGATCTCCTTGCTGTGGTGGAAA-CCGATATCCTTGGAGAGGTTGCTGAACAGAAAGA 5607
Query 5424 GGAGTTAAAAACC-GCATTCAAGAAGAAGAAAGAAACT-GTAAAACGCAAGTCACCTGAG 5481
|| | ||||| |||| ||| || ||||||||| | |||||| |||||| ||||
Sbjct 5608 GGTGG-AAAAATTTGCATCCAA-AAT--GAAAGAAACAAG-AAAACGGAAGTCATTTGAG 5662
Query 5482 ACTCTGAAATTGATTGCTGAAAATGTAACGTTCAGGAAAAGTCATGTG-TTAGAGTTACT 5540
||||||||||||||||||||||||||||||||||| || | |||| | ||| |||||||
Sbjct 5663 ACTCTGAAATTGATTGCTGAAAATGTAACGTTCAG-AA--GCCATG-GATTAAAGTTACT 5718
Query 5541 TTCTCCGGTCACAGCTCAGCTGCAGAGGCCTCTGACTCCAAAGTT-AAAATCAAAACTGG 5599
|||||||||||| |||||||||||| ||| ||| ||||||||| | |||| |||| ||||
Sbjct 5719 TTCTCCGGTCACTGCTCAGCTGCAGCGGCATCTAACTCCAAAGATCAAAA-CAAATCTGG 5777
Query 5600 AGGAGATGTTAAGGTATATTGCAGCTGGTATTGAAGGCAATCCAACTGTTGATCAAGAAG 5659
|| ||||||||| | |||||||||||||||||||||||| || ||||||| |||| ||
Sbjct 5778 AGAAGATGTTAAAACAAATTGCAGCTGGTATTGAAGGCAATACATCTGTTGACCAAGGAG 5837
Query 5660 ATATGTTT-TGTTT-TAT-T----TA-T-GATG--G-TATCAACAACAAGATTGGTCTTG 5707
|| | ||| | ||| ||| | || | |||| | ||| || |||| || ||||||||
Sbjct 5838 ATCTTTTTCTTTTTATATATGGCCTAGTTGATGATGGTATTAATAACAGGAGTGGTCTTG 5897
Query 5708 GGGATCAAGTGTCTTCCCCACCATCCAAAAAGAA-AAGGAAATCAAGAGATCTGCAA-A- 5764
| ||||||||||||| ||||| ||||||||||| ||| ||||||||||||||| || |
Sbjct 5898 GAGATCAAGTGTCTTTACCACCCTCCAAAAAGAAGAAG-AAATCAAGAGATCTGAAAGAG 5956
Query 5765 A-TACTGC-T-G-GT---GCT---AAGTCATGTCCACATCTCATAACCGTCTTTGCTCTG 5814
| | ||| | | || | | ||||||||||||||||| |||||||| |||||||||
Sbjct 5957 ACTTCTGGGTTGTGTTTTGGTCCGAAGTCATGTCCACATCTTATAACCGTGTTTGCTCTG 6016
Query 5815 GACTTATTGCACAACAGACTGAAGAAAAT 5843
|||||||| | ||| || |||| |||||
Sbjct 6017 GACTTATTTTATAACCGAATGAA-AAAAT 6044
Score = 955 bits (517), Expect = 0.0
Identities = 1006/1235 (81%), Gaps = 61/1235 (5%)
Strand=Plus/Plus
Query 2158 CTCTCTGCTGGCAGGATACATGAGGCATATGTGCAGCTTGTATTCAATGGAATGAT-AGG 2216
||||| ||||||||||||||| |||||||||| |||||||||| ||||| ||| | ||
Sbjct 2315 CTCTCCGCTGGCAGGATACATTCGGCATATGTGAAGCTTGTATTGAATGGGATGTTGGGG 2374
Query 2217 ACTATTTCATAATCGCTTTTC-TAAATTACCGAAG--CCAGCATTTGAGTGCCTTGCGAT 2273
| |||| |||| | | || || | || | | | ||||| |||||| ||||||
Sbjct 2375 A-TATTACATATTAG-TTATCGT-CCTTTGTG-TGTTCAAGCATCTGAGTGTCTTGCG-G 2429
Query 2274 TCTCTTG-GA-GAGGCACAC-GGCCGCGGTGTGGACTGGTTTTGTTTGCTATTTCCGCCA 2330
| ||||| || || | || || || ||||||| || ||||||||| ||||| | ||
Sbjct 2430 T-TCTTGTGAGGAAATATACTGG-TGCAGTGTGGAGTGATTTTGTTTGTTATTTGGGGCA 2487
Query 2331 GTGCCAACTAAAATTCCAAACCCTCCACAATCATAGTGAGAATGAAAATTACAGCACT-T 2389
||||||||||||||| |||||||||| ||||||||||||||| || | || | | |
Sbjct 2488 GTGCCAACTAAAATTTGAAACCCTCCATGATCATAGTGAGAATGCGAACCAAAGTA-TGT 2546
Query 2390 CAGAGA---A-G--TAT-A-CT-GATC-GGATGGACCGTTTTAATTCATTTCTATCTCCG 2439
|||||| | | | | | | ||| | |||| ||||||||||| ||||| | |||
Sbjct 2547 CAGAGAGGCATGCATGTAATTTAAATCTGAATGG-CCGTTTTAATTTGTTTCTCTTTCCA 2605
Query 2440 CCATCTGATAGCACACCTACTGC-A--G-A----A-GTGGTATCTTTGTTGCTCCAGACC 2490
||||||| || ||| |||||||| | | | | ||||||||| |||||| ||||||
Sbjct 2606 CCATCTGCTATCACGCCTACTGCAACGGTATCTGATGTGGTATCTCAGTTGCTACAGACC 2665
Query 2491 TTACAAAATG-TTCCCACTGTTGCTCAGTCTCGGGCTTCTGACATTCTCCCTTTGTTATT 2549
|||||||| | || | | |||||||||||||||||||||||| |||||||||||||| ||
Sbjct 2666 TTACAAAAAGCTT-CAAGTGTTGCTCAGTCTCGGGCTTCTGAAATTCTCCCTTTGTTGTT 2724
Query 2550 GGAATTTTTGGGATACAACAGCGAACATCCCATGAGGGTCGGATTATTTAATGGCGGAGC 2609
||||| ||||||||||||||||| |||| ||| ||||||| || ||||||| |||
Sbjct 2725 AAAATTTCTGGGATACAACAGCGAAAATCCTGGGAGTGTCGGATCATATAATGGCCGAGT 2784
Query 2610 TTGTAAAGGAAAGGAGTGGAAGA-AGTTACTTGTACAATGGTTGACGTTGCTGAAGTTGA 2668
|||||||||| |||| ||||||| ||| ||||||||||||||||||||||| || || |
Sbjct 2785 TTGTAAAGGAGAGGACTGGAAGACGGTT-CTTGTACAATGGTTGACGTTGCTAAAATTAA 2843
Query 2669 TGAAGAATCCAAGGTCGTCTCGTTTTAGTCAGTTTGTT-AACGACGTTCTCCAGAATAGG 2727
|||||||||| ||||||| | |||||||||| ||| || |||||| |||| |||||||||
Sbjct 2844 TGAAGAATCCTAGGTCGTTTTGTTTTAGTCAATTT-TTAAACGACATTCTGCAGAATAGG 2902
Query 2728 TTCCTGGACGATGATGATGCTGAAATACAAATGAATGTCCTAGAGTGTCTTATGTTGTG- 2786
|||||||| ||| ||||||||||||| |||| |||||| |||||||| ||| ||||| |
Sbjct 2903 TTCCTGGATGATAATGATGCTGAAATCCAAACGAATGTTCTAGAGTGCCTTCTGTTG-GC 2961
Query 2787 GAATGACTACTTATTCCCATACCACAAGCATTTGGAGAATTTGATCAAA-GAAAATAAAT 2845
|||||||| |||| ||||| ||| | |||||||| ||||||||||||| |||| |||
Sbjct 2962 GAATGACTTCTTACTCCCACACCGCCAGCATTTGTTGAATTTGATCAAACCAAAA-GAAT 3020
Query 2846 TGAGGGAAGAACTCACGACCTGGAACTTTTCC-AAAGAAATTGAAGAAGCTCACAGATCT 2904
|||| ||||||||||| ||||||||||| ||| ||| | || | |||| |||||||||||
Sbjct 3021 TGAGAGAAGAACTCACAACCTGGAACTTGTCCGAAA-ACATCGGAGAACCTCACAGATCT 3079
Query 2905 CAttttttttCTCTTGTAATTCGCATTCTTATGCCAAAAGTTAGGAAATTAAAGAATTCG 2964
|| |||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||
Sbjct 3080 TATATTTTTTCTCTTGTAATTCGCATCCTTATGCCAAAAGTTAGGACATTAAAAAATTCG 3139
Query 2965 GCTTCGCA-TAAGCATAAAAGAAGTATCCGTCACCGAAAAGCGGTTCTTTGCTTTATATC 3023
||||| | |||||| | ||||||||||||||| || || |||||||||||||||||
Sbjct 3140 GCTTC-AAGGAAGCAT---ACAAGTATCCGTCACCGGAAGGCAGTTCTTTGCTTTATATC 3195
Query 3024 TCAGCTGGATGTTAATGAACTTTCCCTGTTCTTTGCATTGTTGATTAAGCCTTTGAAAAT 3083
|||||||||||||||||||||| | ||||||||||||||||||| || |||||||| ||
Sbjct 3196 TCAGCTGGATGTTAATGAACTTGCGTTGTTCTTTGCATTGTTGATAAAACCTTTGAACAT 3255
Query 3084 CATATCAGAGGAAATGATGGACTT-TTTTGGGAGCTCCGTG-AAAAGTTCTCTGGATTGT 3141
|||||||||||||| ||||||| |||||| || || | | ||||||||||| || | |
Sbjct 3256 CATATCAGAGGAAACAATGGACTCATTTTGG-AGTTCAG-GCAAAAGTTCTCTCGACTAT 3313
Query 3142 TTCCAAAGGTCGAATTTCCTGAAATATTTCACTGCTAAAACTATATCAACGTTATCCAGG 3201
||||||| || ||||| |||||||||||||||| | | ||||| ||||||||||||||
Sbjct 3314 TTCCAAAACTCCAATTTTCTGAAATATTTCACTGTTGATACTATTTCAACGTTATCCAGA 3373
Query 3202 GAGAAGAAATATGGGTTTCTTCATGTCATCGAACATCTCCTGGAAGAATTTAATGTG-TC 3260
| |||||| ||||||||||||||||||| ||||| |||| |||| ||| ||| |
Sbjct 3374 AATCAGAAATTTGGGTTTCTTCATGTCATCCAACATATCCTTGAAGTCTTTGATGAACTT 3433
Query 3261 CCATGTCCAACCATTTCTAGACTTCT-TGATGGGATGTGTTGTTCGGTTATTGGCAAACT 3319
| ||||| ||| ||||||||||| | |||||||||||||||| ||| |||||| ||| |
Sbjct 3434 CG-TGTCCGACCTTTTCTAGACTT-TATGATGGGATGTGTTGTCCGGCTATTGGTAAATT 3491
Query 3320 ACGCTCCAAATCTCGATGAAGAAATGAACATTGAT 3354
| ||||||||| | |||||||||||||||||||||
Sbjct 3492 ATGCTCCAAATGTTGATGAAGAAATGAACATTGAT 3526
Score = 778 bits (421), Expect = 0.0
Identities = 764/925 (83%), Gaps = 42/925 (5%)
Strand=Plus/Plus
Query 6961 GATATTTGGAAAATGGTGTTTAAGTTGTTGTTGCACCGACAC-CAATGGTTGTGTACTAT 7019
|||||||||||||||||||||||||| |||||||||| |||| | ||||||| | | ||
Sbjct 7127 GATATTTGGAAAATGGTGTTTAAGTTCTTGTTGCACCCACACGC-ATGGTTGCGAAATAA 7185
Query 7020 ATCTTGCCGGCTCCTGAAT-TACTATTTCAAAGCATTAGCTGGGAGTGAAAGAGGAGAAT 7078
||| ||| ||||||||||| | ||||| | |||||||||||||| ||||| |||||
Sbjct 7186 ATCCTGCAGGCTCCTGAATCT-TTATTTTGAGGCATTAGCTGGGAGAAAAAGACCAGAAT 7244
Query 7079 CTCAG-AAACTAGTAGCTGATTCTCTTCTCGGGAAGTCAAGTAGCCTGTTCATGGTAGCT 7137
|| | | | ||||||| |||||||| || | |||| ||||||| ||||||||||| |||
Sbjct 7245 GTC-GTACATTAGTAGCGGATTCTCTCCTAGAGAAGCCAAGTAGTCTGTTCATGGTGGCT 7303
Query 7138 GTTTCTCTTTGCGTCCAATTAGAGGATCAACGCAGCACAGGAAACGAAAACT-ATGGTGA 7196
|||||||||||| |||| ||| |||| |||| || ||| || | || | | ||| |||
Sbjct 7304 GTTTCTCTTTGCTTCCAGTTAAAGGAGCAACCCACCAC-GG--GC-AACATTGATGTTGA 7359
Query 7197 ---CATTACAGAAAATATTGTTTTTGCAGCCTCTGGTCTTCATTCTATGATTGGACAATC 7253
| | |||| ||||||||||||||| | |||| ||||||||||| ||||||||||||
Sbjct 7360 TCTCCTCACAGCAAATATTGTTTTTGCGGTCTCTAGTCTTCATTCTCTGATTGGACAATT 7419
Query 7254 T--TC-TG--A---TC-AT-GAGTTCTGGTCCAGTCTTGACAATGATGAGCAAGTGGTCT 7303
| || | | | || | ||||||||||||||||| | |||||||||||||| |
Sbjct 7420 TGATCAGGCAACCCACAATCG-GTTCTGGTCCAGTCTTGGTGAGGATGAGCAAGTGGTAT 7478
Query 7304 TCCTCAATGCCTTTAAAGAGCTTGATTCAGGGAAAGGAATGTCTAATATTCTGGCTATTA 7363
||||||| |||||| ||| ||||||| |||||||||| | ||||| | || ||||| |||
Sbjct 7479 TCCTCAAAGCCTTTGAAGTGCTTGATGCAGGGAAAGGGAGGTCTACTTTTTTGGCTCTTA 7538
Query 7364 CCTCAGGAAAACGTATTGA-AA-----ACGATG-TG--AGAAATGTATTGATTGGAAGTT 7414
||||||| ||||||| ||| || | |||| || ||||||||| |||| |||||||
Sbjct 7539 CCTCAGGCAAACGTACTGAGAATGGTGATGATGATGTAAGAAATGTAATGATCGGAAGTT 7598
Query 7415 TGCTCAAGAGAATGGGGAAGATTGCTCTTGATATGGACTCTCTTCAGATGAGACTTGTGT 7474
||||||| ||||||||||||||||||||||||||||| ||| ||||||||||| || |||
Sbjct 7599 TGCTCAAAAGAATGGGGAAGATTGCTCTTGATATGGAGTCTGTTCAGATGAGAGTTATGT 7658
Query 7475 TCAACGTCTACAAAGCATTTGCCTCACAATTGAATCAAGAAGAGTGTGGCCTATACGCCT 7534
|||||||||| ||| | |||||||||||||||||||||||||| ||| || |||| ||||
Sbjct 7659 TCAACGTCTATAAATCTTTTGCCTCACAATTGAATCAAGAAGAATGTCGCTTATATGCCT 7718
Query 7535 TCAGAATTCTGCTCCCGTTGTACAAAGTTTGCCAAGGATATACCGGAAAAGTCGTCACAG 7594
|| ||||||||| |||||||||||||| ||| |||||||||| |||||| |||||||||
Sbjct 7719 ACAAAATTCTGCTTCCGTTGTACAAAGTCTGCGAAGGATATACGGGAAAAATCGTCACAG 7778
Query 7595 ATGAGTTGAAACAGCTAGCGGAAGAGGTAAGAGACAGTATAAGAGACAAGAGCTTAGGCA 7654
||||||||||||||||||| ||||||||| ||||||||||||| |||||||| |||||||
Sbjct 7779 ATGAGTTGAAACAGCTAGCAGAAGAGGTACGAGACAGTATAAGGGACAAGAGTTTAGGCA 7838
Query 7655 GCCAAATGTTTGTGCAAGTTTACAGCGAAATCAA-AAAGAGTATG-GAAGCGAAAAGGGA 7712
| ||||||||||| |||| ||||| ||||| || ||| ||| || ||| ||||||| ||
Sbjct 7839 ACAAAATGTTTGTGGAAGTATACAGTGAAAT-AAGAAACAGTTTGAGAA-CGAAAAGAGA 7896
Query 7713 GAAGAGGAAA-CGAGAAGAGAAGCTAATGGCGGTGATAAACCCCGAGAGAAACGCAAAGA 7771
||||| ||| |||||||||||||||||||| ||| |||| || ||||||||||| ||||
Sbjct 7897 CAAGAG-AAAGCGAGAAGAGAAGCTAATGGCAGTGGTAAATCCGGAGAGAAACGCCAAGA 7955
Query 7772 GGAAACTCAAGTTAGCTGCAAAAAACAAGGCTAACAAGAAAAGAAGGATTATGAGCAATA 7831
||||||| | ||| ||| |||| || || || ||||||||||| || || | ||||| |
Sbjct 7956 GGAAACTGAGGTTGGCTTCAAAGAATAAAGCAAACAAGAAAAGGAGAATGACGAGCA-TG 8014
Query 7832 AAATGGA-TAGATGGGCTCGCTCTT 7855
|||| | |||||||||| ||||||
Sbjct 8015 AAATTGTCTAGATGGGCTTGCTCTT 8039
Score = 651 bits (352), Expect = 0.0
Identities = 625/749 (83%), Gaps = 50/749 (7%)
Strand=Plus/Plus
Query 1316 GTGCAATCAACAATATGATTTGGGGGTCGCCTGAGGATGTTATTCCTCAGTTACTATCAT 1375
||||||| ||||| |||||||||| ||| ||||||| |||||||||| ||||||| |||
Sbjct 1488 GTGCAATTAACAACATGATTTGGGAGTCTTCTGAGGAAGTTATTCCTCTGTTACTAACAT 1547
Query 1376 TGTGT----A--AT---ATACAACAAACAAGTCACGAC-ACGGTGAACATCAT-TGTTGA 1424
||||| | || | ||||||||||||||||||| | ||||||| ||| | | |
Sbjct 1548 TGTGTGAAGAGCATAAGACACAACAAACAAGTCACGACGTC-GTGAACAGCATAAG-TCA 1605
Query 1425 AACGTTTGAGAGCAGATACAAGAGAATCCATGAGTTCTTGGAAG-AGAATATTAAGAAGA 1483
||| |||||||| |||||| ||||||| |||||||||||||||| | || ||||| |||
Sbjct 1606 AACATTTGAGAGTAGATACGAGAGAATTCATGAGTTCTTGGAAGCA-AAGATTAAAAAGG 1664
Query 1484 TTCAAAAGAGT-TTAGAGAATACTGGATTAGCTCAAATTGATGAGGCCGAGTTAGCTACC 1542
||||| ||| | || |||||| ||||||||||||||||| ||||||||||||| ||| |
Sbjct 1665 TTCAACAGAATATT-GAGAATGCTGGATTAGCTCAAATTAATGAGGCCGAGTTGGCTGCA 1723
Query 1543 GTTCGGGGAGTTGTCAACTGTTATCCTTACTTTCAAGTGGATTCATCATTACTGATTTGC 1602
|| ||||||||||||| ||||||||||| ||| ||||||||||||||||| ||||||||
Sbjct 1724 ATTTGGGGAGTTGTCAAGTGTTATCCTTATTTTAAAGTGGATTCATCATTATTGATTTGC 1783
Query 1603 CTTAAGAATACGCTCAGACAGCATCTGGCAGTCTCAGTTGTAAACACTTTTAGTGGTCCA 1662
||||||| || |||||||||||| ||||||| |||| |||| |||||| ||||| |||
Sbjct 1784 TTTAAGAAAACTCTCAGACAGCATTTGGCAGTGTCAGATGTAGACACTTGCAGTGGCCCA 1843
Query 1663 GAGTTGATGTGGCAAAGCTTACTTGGTACTTCTTTGAGGTCATGTCACAAACTCTGTTCT 1722
|| ||||||||||| ||||||||||||||| |||||||||||||| ||||| ||
Sbjct 1844 GAATTGATGTGGCAGAGCTTACTTGGTACTACTTTGAGGTCATGTTACAAA--ATG---- 1897
Query 1723 CCTGAAGGAATCAACCACAATGATCTAGAGGAAGCTTTGAGTCTTGCTAAATATCACAAG 1782
| | ||||||||||||| ||||||||||||||||||| | |||||||| || |||||
Sbjct 1898 AC-G--GGAATCAACCACAGTGATCTAGAGGAAGCTTTGTCTTTTGCTAAAGATTACAAG 1954
Query 1783 TCATGTGCAG-AAGT-TCTATCTCCTGTGGCCGACT-ATTTGGATTTTGTGCACAGGCCT 1839
||||||| || |||| | | || || |||||||| | |||||| ||| |||||||||||
Sbjct 1955 TCATGTG-AGCAAGTGT-TGTCCCCGGTGGCCGA-TGTTTTGGAATTTATGCACAGGCCT 2011
Query 1840 -CTATTAGCTAATGATGATAGCTCTAAGGCATATCCAGAACTTCAAGCAAATAAGGC-GG 1897
| ||||||| ||| | ||| |||||| | |||||||||||||||||||||||||| ||
Sbjct 2012 GC-ATTAGCTCATG--G-TAGGTCTAAGCCTTATCCAGAACTTCAAGCAAATAAGGCTGG 2067
Query 1898 AAGATGCTTTTGACATATTTTCTGAAAATCTGCGTCACT-CAAACAAAGAGATCCGTCTT 1956
|||||||||||| ||||||||||||||| ||||||| | | |||||| | |||||||||
Sbjct 2068 -AGATGCTTTTGAAATATTTTCTGAAAATTTGCGTCA-TCCGAACAAAAATATCCGTCTT 2125
Query 1957 TTGACTCTAAGGATTTTGTGCCATTTTGAAACCTT-T--TCt-----tt-ttttGAAGAG 2007
||||||| ||||||||||||||||||||||| || | ||| || ||||||||||
Sbjct 2126 ATGACTCTGAGGATTTTGTGCCATTTTGAAACTTTGTCGTCTGACCCTTCTTTTGAAGAG 2185
Query 2008 CATCCTCCTAAGAAGAAAATGAAATCTGA 2036
|||||||||||||||||||||||| ||||
Sbjct 2186 CATCCTCCTAAGAAGAAAATGAAAACTGA 2214
Score = 307 bits (166), Expect = 9e-82
Identities = 464/601 (77%), Gaps = 48/601 (8%)
Strand=Plus/Plus
Query 744 AGGGATCAAGAGGATCCTTTCTGAAGTTGCAGATCCA-CCGAAAAGAA-CTGGAGGAGTT 801
||| || |||| ||||||||||||||||||| ||||| || |||| || |||||||||||
Sbjct 835 AGGTATGAAGATGATCCTTTCTGAAGTTGCACATCCATCC-AAAA-AAGCTGGAGGAGTT 892
Query 802 ACTTTACTATATTATGTTATGAGAAATA-CTGATGCGAA-ACTCCATTCAAAAGCTGGCA 859
|||||||| |||||||||| || || ||| ||| ||||||||||||||| || |
Sbjct 893 GGAGTACTATATAATGTTATGAGGGGTACCT-ATG-GAAGACTCCATTCAAAAGCCGGGA 950
Query 860 GGGTTTTGAG--AATAG-TG-AATTTTTATCCTGAAGCTGCGTT--AC-ATGGTT-CT-- 909
| |||||||| | | || || || | | | | || || || || || ||
Sbjct 951 GAGTTTTGAGCTTCTTGCTGAAAGATTCAACAT-TATCTTTTTTGGACAAT-TTTCCTCA 1008
Query 910 -GG---TAGTACA---GTGGAAGTTGTGAGTTCAACTTTGGAGAGAATATGCAAGGATTA 962
|| | ||||| |||||||||||||||| |||| ||||||||||| ||||||
Sbjct 1009 AGGCCCTTGTACAGTCGTGGAAGTTGTGAGTTTGGTTTTGCAGAGAATATGCGAGGATT- 1067
Query 963 T-AAAGTAGAAGAATTAAGTGTTATCT-GGAATTGCTTGTATCAGGAAGTAAACAAGTCA 1020
| ||| |||| ||||||||| ||| | |||| | ||||||| || || ||||||| |||
Sbjct 1068 TGGAAGCAGAAAAATTAAGTGCTATGTGGGAA-TACTTGTATAAGAAAATAAACAAATCA 1126
Query 1021 ATCTTGAACAA-ACAATCAGTTCATTTAACCCGACTGTTGACTGTGATTACT-TCAGCTG 1078
|||| ||||| | ||||||||||| ||| ||| ||||||| |||| ||| | | | ||
Sbjct 1127 ATCTCAAACAAGA-AATCAGTTCATCTAAGCCGGCTGTTGAGTGTGCTTA-TGGCGGTTG 1184
Query 1079 TTAGGATTAAGAAAGGTCTCAAGGTTCATGATTA-CCCATCTTTGATTGAAATCGTGAGC 1137
||| ||||||| |||||| ||||||||| || || |||||| |||||| ||||||||||
Sbjct 1185 TTAAGATTAAGGAAGGTCGCAAGGTTCACGA-TATCCCATCACTGATTGGAATCGTGAGC 1243
Query 1138 CAAATTGTGTCAACTTTTATGGCTTCCTCTGAGATCGTTGTAGAAGGGGATAACTTATCT 1197
| ||||||||||||||| | |||||||||||| || ||||||||||||||||||||||
Sbjct 1244 CGCATTGTGTCAACTTTTTTCACTTCCTCTGAGACCGCTGTAGAAGGGGATAACTTATCT 1303
Query 1198 GCTGTCCTCGATGAAGTTTTGCGGCT-GATATTATGCACCATCGACAAACCCATTTCTGT 1256
|||||||| |||||||||||| | | |||||||||||| ||| | | | | | ||
Sbjct 1304 GCTGTCCTTGATGAAGTTTTG-GAATTGATATTATGCACAATC-A-A--C--A---CGGT 1353
Query 1257 CCGTGAAATGGAATCCATTGCTTTAAAATGGGCTCCTAtttttttCTTGAAGAATTCAAG 1316
| |||||||||| | |||||| |||||||| |||||| |||||||| ||||||
Sbjct 1354 CAATGAAATGGAAACTGTTGCTTCGCTTTGGGCTCCCATTTTTGCCTTGAAGAGTTCAAG 1413
Query 1317 T 1317
|
Sbjct 1414 T 1414
> AT1G64385.1 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown;
LOCATED IN: endomembrane system; Has 66 Blast hits to 66
proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa
- 6; Fungi - 4; Plants - 51; Viruses - 0; Other Eukaryotes -
5 (source: NCBI BLink). | chr1:23900035-23902281 FORWARD LENGTH=1565
Length=1565
Score = 56.5 bits (30), Expect = 4e-06
Identities = 32/33 (97%), Gaps = 0/33 (0%)
Strand=Plus/Plus
Query 5478 TGAGACTCTGAAATTGATTGCTGAAAATGTAAC 5510
||| |||||||||||||||||||||||||||||
Sbjct 1496 TGAAACTCTGAAATTGATTGCTGAAAATGTAAC 1528
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 392493926689
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5