BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg912370
Length=2931
Score E
Sequences producing significant alignments: (Bits) Value
AT1G26760.1 | Symbols: ATXR1, SDG35 | SET domain protein 35 | c... 2460 0.0
AT1G26761.1 | Symbols: | Arabinanase/levansucrase/invertase | ... 1869 0.0
> AT1G26760.1 | Symbols: ATXR1, SDG35 | SET domain protein 35 |
chr1:9248152-9249943 REVERSE LENGTH=1792
Length=1792
Score = 2460 bits (1332), Expect = 0.0
Identities = 1540/1642 (94%), Gaps = 8/1642 (0%)
Strand=Plus/Plus
Query 1292 CAATGGGAGGAGAGCAATTCGAGCTAGAGGAAGATCGAGACGGACCATTGGAGCTGTTGC 1351
||||| ||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||
Sbjct 1 CAATGAGAGGAGAGCAATTCGAGCTAGAGGAAGATAGAGACGGGCCACTGGAGCTGTTGC 60
Query 1352 AGAGCTTGAGATCCAAAGCGACGGAGCTTCTTCTTCGGGAAGAATGGGAAGAATCTATAA 1411
||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct 61 AGAGCTTGAGATCTAAAGCAACGGAGCTTCTTCTTCGAGAAGAATGGGAAGAATCTATAA 120
Query 1412 AAGTTTACACGGAGTTCATCGATCTCTCTCGGAGGCAAGTCTCAAGAAATGGTGGATCCG 1471
|||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct 121 AAGTTTACACGGAGTTCATCGATCTCTCTCGGAGGCAAGTCTCAAGTACTGGTGGATCCG 180
Query 1472 ACCCGGATCCGGATTCGATTGCTAAGCTCCGGAGATCTCTCTGCTTGGCTCTATGTAATC 1531
||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||
Sbjct 181 ACCCGGATCCGGATTCGATTGCTAAGCTCCGGAAATCTCTCTGTTTGGCTCTATGTAATC 240
Query 1532 GAGCTGAGGCGCGAGCCAGGCTACGAGATTTCTTGGAAGCAATGAGGGATTGTGATCAAG 1591
|||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||||
Sbjct 241 GAGCTGAGGCAAGAGCTAGGCTACGAGATTTTTTGGAAGCAATGAGGGATTGTGATCAAG 300
Query 1592 CACTTGAAGTCGAGAAGACCCATTTCAAGACTCTTCTTTGTAAAGGTAAAGTTTTGCTTG 1651
|||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 301 CACTTGAAATCGAGAAGACTCATTTCAAGACTCTTCTTTGTAAAGGTAAAGTTTTGCTTG 360
Query 1652 GATTGAGCAAATACTCATTGGCTTTGGAATGCTTTAAAACGGCTCTGCTCGATCCTCAAG 1711
|||||||||||||||| |||||||||||||| |||||||||||| |||||||||| ||||
Sbjct 361 GATTGAGCAAATACTCTTTGGCTTTGGAATGTTTTAAAACGGCTTTGCTCGATCCACAAG 420
Query 1712 CGAGTGATAACTTCGAGACTGTTACTGGGTACATGGAGAAATGTAAGAAGCTTGAGTTTC 1771
||||||||||||| ||||||||||||| ||| || |||||||||||||||||||||||||
Sbjct 421 CGAGTGATAACTTGGAGACTGTTACTGTGTATATAGAGAAATGTAAGAAGCTTGAGTTTC 480
Query 1772 AGGCAAAGACTGGAGCTTTTGATTTGTCTGATTGGATCTTAAGTGGGTTTCGTGGGAGAT 1831
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct 481 AGGCAAAGACTGGAGCTTTTGATTTGTCTGATTGGATCTTAAGTGAGTTTCGTGGGAAAT 540
Query 1832 GTCCCGAGCTTGCTGAGTTTATTGGGTCGATTGAGATTAAGAAATCTGAGTTTAGTGGGC 1891
|||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 541 GTCCTGAGCTTGCTGAGTTTATTGGGTCGATTGAGATTAAGAAATCTGAGCTTAGTGGGC 600
Query 1892 GTGGATTGTTTGCTACGAAGAATATTGTTGGCGGG-ACTTCGATTTTAGTTACAAAGGCG 1950
|||||||||||||||||||||| ||||||| | || |||| | |||||||||||||||||
Sbjct 601 GTGGATTGTTTGCTACGAAGAACATTGTTG-CTGGTACTTTGGTTTTAGTTACAAAGGCG 659
Query 1951 GTTGCGATTGAGAGAGGGATCTTAGGTAATGGAGAGTCTGGCGAGAAAGCGCAGTTGATA 2010
|||||||||||||||||||||||||| |||||||||| ||| || ||||||||||||||
Sbjct 660 GTTGCGATTGAGAGAGGGATCTTAGGAAATGGAGAGTGTGGGGAAAAAGCGCAGTTGATC 719
Query 2011 ATGTGGAAGAATTTCGTTGAAGAGGTTACTGAATCCGTGAGGAAATGCGGTAGGACACGT 2070
||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct 720 ATGTGGAAGAACTTCGTTGAAGAGGTTACTGAATCCGTGAGAAAATGCGGTAGGACTCGT 779
Query 2071 CGAGTTGTCTCCGCTTTGTCCACTGGACAAGACGAAGACAATCTGGAGATTCCAGATATA 2130
||||||||||||||||||||||||||||||| ||||| | |||||||||||| || |||
Sbjct 780 CGAGTTGTCTCCGCTTTGTCCACTGGACAAGGTGAAGATAGTCTGGAGATTCCTGAGATA 839
Query 2131 GCTCTCTTTAGGCCTGATGAAGCATTTGAAACTTATGATGACTCGAAACAGAGTTTGGAT 2190
||||| ||||| |||||||||||||||||||||| || ||||| ||||||||||||||||
Sbjct 840 GCTCTGTTTAGACCTGATGAAGCATTTGAAACTTGTGGTGACTGGAAACAGAGTTTGGAT 899
Query 2191 ACGGAGAAGTTATTGAGTATCTTGGATGTGAATTCTCTGGTGGAAGATGCTGTTTCAGCT 2250
|| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct 900 ACAGAGAAGTTGTTGAGTATCTTGGATGTGAATTCTCTGGTGGAAGATGCGGTTTCAGGT 959
Query 2251 AAAGTTATGGGGAAGAACAAAGAGTATTACGGTGTAGGGCTATGGACTCTAGCTTCATTC 2310
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 960 AAAGTTATGGGGAAGAACAAAGAGTATTACGGTGTAGGGCTATGGACTTTAGCTTCATTC 1019
Query 2311 ATTAACCATTCGTGTATCCCAAACGCAAGACGTCTCCATGTTGGAGACTACGTGATTGTT 2370
|| ||||| ||||||||||| |||||||||||||| || |||||||||||||||||||||
Sbjct 1020 ATCAACCACTCGTGTATCCCTAACGCAAGACGTCTTCACGTTGGAGACTACGTGATTGTT 1079
Query 2371 CATGCCTCCAGAGACATCAAAGCCGGGGAGGAGATCA-CTTTTGCTTACTTCGACGTGCT 2429
|||||||| ||||| |||||| | ||||| ||||| | |||| |||||||| || |||||
Sbjct 1080 CATGCCTCGAGAGATATCAAAACAGGGGAAGAGATTAGCTTT-GCTTACTTTGATGTGCT 1138
Query 2430 TTCTCCATTGGAAAAGCGGAAAGAGATGGCTGAGTCATGGGGATTTCGTTGCGGATGCAG 2489
||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||
Sbjct 1139 TTCTCCATTGGAAAAACGGAAAGAGATGGCTGAGTCATGGGGGTTTTGTTGCGGATGCAG 1198
Query 2490 TAGATGCAAGTTTGAGAGTCTCTTGTGTGTTACCAACCAAGAGATAAGAGAGCTTGAAAT 2549
||||||||||||||||||| |||||| || ||||||||| ||| | |||||| |||||||
Sbjct 1199 TAGATGCAAGTTTGAGAGTGTCTTGTATGCTACCAACCAGGAGGTTAGAGAGTTTGAAAT 1258
Query 2550 GGGTTTAGAGAGAGGCGTAGATGC-GGGAAACGCGGTTTATATGGTGGAGGAAGGGATGA 2608
|||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct 1259 GGGTTTAGAGAGAGGCGTAGATGCAGGGAA-CGCGGTTTATATGGTGGAGGAAGGGATGA 1317
Query 2609 AGAGATGGAAGGTAAAAGGGAAGGATAAAGGGTTATTGAGAGCATCTTATTGGGGAATTT 2668
|||||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||
Sbjct 1318 AGAGATGGAAGGTAAAAGGGAAAGATAAAGGGTTGCTGAGAGCATCTTATTGGGGAGTTT 1377
Query 2669 ATGATGAGATTTATAACTCGGAGAGATTTATGAAGAGGTGGGGAAGGAAGATACCAACAA 2728
||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||
Sbjct 1378 ATGATGAGATTTATAACTCAGAGAGACTTATGAAAAGGTGGGGAAGGAAGATACCAACAA 1437
Query 2729 TGGAAGTTGTGGTGGATAGTGTGTCTGATGTTGTTGGAAGTGATGAGAGATTGATGAAGA 2788
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1438 TGGAAGTTGTGGTGGATAGTGTCTCTGATGTTGTTGGAAGTGATGAGAGATTGATGAAGA 1497
Query 2789 TGCCTGTGGAAGGGATGATGAAGAAGAATGGAGGTTGCAGTAACATTGTGGAGATGGATA 2848
|| ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |
Sbjct 1498 TGGCTGTGGAAGGGATGATGAAGAAGCATGGAGGTTTCAGTAACATTGTGGAGATGGAGA 1557
Query 2849 AAAT-ATTGAAGCTAGGGAAGGGTGTTTATGGCAAAGTGGTATCGAAAAAGAAGGCAATG 2907
|||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1558 AAATCAT-GAAGCTAGGGAAGGGGGTTTATGGCAAAGTGGTATCGAAAAAGAAGGCAATG 1616
Query 2908 AAGACTCTTCTTGGCCTAGAGT 2929
||||||||||||||| ||||||
Sbjct 1617 AAGACTCTTCTTGGCATAGAGT 1638
> AT1G26761.1 | Symbols: | Arabinanase/levansucrase/invertase
| chr1:9250224-9251644 REVERSE LENGTH=1421
Length=1421
Score = 1869 bits (1012), Expect = 0.0
Identities = 1203/1293 (93%), Gaps = 22/1293 (2%)
Strand=Plus/Plus
Query 1 ATGGAAGCTACTTG-TGCAAATCCCTCCATTGTCACCGCCTCGAGAACAATTCAACCTTA 59
||||||||||| || || |||||||||||||||||| |||||||||||| ||||||||||
Sbjct 42 ATGGAAGCTAC-TGCTGTAAATCCCTCCATTGTCACTGCCTCGAGAACAGTTCAACCTTA 100
Query 60 C---CGATCACCCGCTCTCTCACTTCGATTCCTTACTTACCGGAACAAACGtttttttCC 116
| |||| | | |||||||||||||||||| ||| ||||||||||||||| ||| |||
Sbjct 101 CAGGCGATTATCAACTCTCTCACTTCGATTCCCTACATACCGGAACAAACGTGTTTCTCC 160
Query 117 TTAT-TCGCTCACAGTCACAAGATGTTCCACCACAAAAAGCAGAGAACCGGGTCAAGATT 175
|| | |||||||| ||||||||||||||||||||||||| |||||| | ||||||||||
Sbjct 161 TT-TCACGCTCACAATCACAAGATGTTCCACCACAAAAAGTAGAGAAGCAGGTCAAGATT 219
Query 176 CAACCTTTGAATTATCGATCTCTTTGAAGAGAGGGCTGGTTCTTGATCTGGGCGTCTCTA 235
| |||||||||||||||||||||||| ||| ||||||| ||||||||||
Sbjct 220 ----C--------ATCGATCTCTTTGAAGAGAGGGCTAGTTTTTGATCTTGGCGTCTCTA 267
Query 236 AAGATTCATGGGACAGTGAGGAGATTGGTTCTCCGGTTGTGAAGAGATTTCTAAGCGATA 295
||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 268 AAGATTCGTGGCACAGTGAGGAGATTGGCTCTCCGGTTGTGAAGAGATTTCTAAGCGATA 327
Query 296 ACGAAGAGAGATGGTACATGTGGTACCATGGAAGCTCAAAGCAGAACCCTGTTTCTGATT 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 328 ACGAAGAGAGATGGTACATGTGGTACCATGGAAGCTCAAAGCAGAACCCTGTTTCTGATT 387
Query 356 GTATCGGATTAGCGGTTTCAAACAATGGGATTCATTGGGAAAGAGGAAAAGGGAAAGTTG 415
|||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||
Sbjct 388 CTATCGGATTAGCGGTTTCCAACAATGGGATTCATTGGGAAAGAGGAAATGGTAAAGTTG 447
Query 416 AGTCAAGCGACGATGTGGGTTTGGTTATGAGCTGTGGTGAAGACTGGTGGGGATTTGATA 475
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 448 AGTCAAGCGAAGATGTGGGTTTGGTTATGAGCTGTGGTGAAGACTGGTGGGGATTTGATA 507
Query 476 CTGCAAGTGTTAGACCTGGTGAAGTTGTGATAATGTCGAGTTCTAAAGTCAGAGCTAATA 535
|||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct 508 CTGCAAGTGTTAGACCCGGTGAGGTTGTGATAATGTCGAGTTCTAAAGTCAGAGCTAATA 567
Query 536 GTTCTGTTTACTGGATGTATTACACTGGCTACACTACTGAGACTGTTGAGTTTCAATCCC 595
| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 568 GCTCTGTTTACTGGATGTATTACACTGGCTACACTAAGGAGACTGTTGAGTTTCAATCCC 627
Query 596 AAGGTTTCACTTCCGGGCTGGGAAATCCGGAAAGGTTTCACCTTTGTGATGAGAATGTTG 655
||| ||| || |||| | ||||||||||||||||||||||||||||||||||||||| |
Sbjct 628 AAGATTTTACGTCCGTGTTGGGAAATCCGGAAAGGTTTCACCTTTGTGATGAGAATGCGG 687
Query 656 AGAAATCTAGGG--T-TTATAGGTCACTTCCCGGGTTAGCAATTAGTCAAGATGGTAGGC 712
|||||||||||| | ||||||||||||||| |||||||| |||||||||||||||||||
Sbjct 688 AGAAATCTAGGGTTTATTATAGGTCACTTCCAGGGTTAGCTATTAGTCAAGATGGTAGGC 747
Query 713 ATTGGGCTAGAATTGAAGGTGAGCATCATAGTGGGGCATTGTTTGATGTTGGGTCTGAAA 772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 748 ATTGGGCTAGAATTGAAGGTGAGCATCATAGTGGGGCATTGTTTGATGTTGGGTCTGAAA 807
Query 773 AAGATTGGGACTTTCACTATGTTGCATCTCCACATGTAGTTTTCCATGGAGATGGCGATT 832
||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||
Sbjct 808 AAGATTGGGACTTTCTCTATATTGCATCTCCACATGTAGTTTTCCATGGAGATGGCGATT 867
Query 833 TACGGATGTATTACCATTCGTTCGATGATAAACCCGGTGAATTCTGCATTGGGATGGCGA 892
||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||
Sbjct 868 TACGGATGTATTACCATTCATTCGATGAGAAAACCGGTGAATTCTGCATTGGGATGGCGA 927
Query 893 GGTCTAGAGATGGGATCAAGTGGTTAAAATTGGGAAAGATATTAGGAGGAAGAATATCCG 952
|||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||
Sbjct 928 GGTCTAGAGATGGGATCAAGTGGTTAAAATTGGGAAAGATCTTAGGAGGAAGAAAATCCG 987
Query 953 AAAAGGATGGATCGGGTTTCTTTGATGAGCTTGGAGGTAGATATCCTTGTGTGACAAGGA 1012
|||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct 988 AAAAGGATGGATTAGGTTTCTTCGATGAGCTTGGAGGAAGATATCCTTGTGTGACAAGGA 1047
Query 1013 ACAAGAGAGACGAGAGTTATGTGATGGCGTATGAAGGTGTAGATAGAACCGGGAAAATGA 1072
|||||||||| ||||||||||||||||| |||||||||||||||||||||||||| | ||
Sbjct 1048 ACAAGAGAGATGAGAGTTATGTGATGGCTTATGAAGGTGTAGATAGAACCGGGAAGACGA 1107
Query 1073 GCATTGGCTTGGCGGTTTCGAAAGACGGGATTAATGATTGGAAACGGGTGCAAGACGAGG 1132
|||| ||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct 1108 GCATAGGCTTCGCGGTTTCGAAAGACGGGATTAAAGATTGGAAACGAGTGCAAGACGAGG 1167
Query 1133 AAGCCGTGGTTGCGGTTGGTGAAGGCAGTGCGTGGGATAATGAAGGAGTTGGGTGTCCAT 1192
|||| ||| | ||||||||||||||| ||||||||||||| |||||||||||||||||||
Sbjct 1168 AAGCGGTGATCGCGGTTGGTGAAGGCGGTGCGTGGGATAACGAAGGAGTTGGGTGTCCAT 1227
Query 1193 ATTTGATTGAGATGGATGGAGACTCTGATCATCAATGGAGATTGTATTATAGAGGTGTTG 1252
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1228 ATTTGATTGAGATGGATGGAGATTCTGATCATCAATGGAGATTGTATTATAGAGGTGTTG 1287
Query 1253 GTAATGGTGGAAGAACAGGAATAGGCTTAGCTG 1285
||||||||||||||||||| |||||||| ||||
Sbjct 1288 GTAATGGTGGAAGAACAGGTATAGGCTTGGCTG 1320
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 145684802472
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5