BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg912411
Length=1368
Score E
Sequences producing significant alignments: (Bits) Value
AT1G26400.1 | Symbols: | FAD-binding Berberine family protein ... 1147 0.0
AT1G26420.1 | Symbols: | FAD-binding Berberine family protein ... 878 0.0
AT1G26380.1 | Symbols: | FAD-binding Berberine family protein ... 821 0.0
AT1G26390.1 | Symbols: | FAD-binding Berberine family protein ... 813 0.0
AT1G26410.1 | Symbols: | FAD-binding Berberine family protein ... 754 0.0
> AT1G26400.1 | Symbols: | FAD-binding Berberine family protein
| chr1:9133291-9134874 REVERSE LENGTH=1584
Length=1584
Score = 1147 bits (621), Expect = 0.0
Identities = 707/749 (94%), Gaps = 4/749 (1%)
Strand=Plus/Plus
Query 356 CGACCTTGGGAGAGCTCTACACAAAGATCAATGAGGCGAGCCAAACGTTAGCGTTCCCTG 415
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 446 CGACATTGGGAGAGCTCTACACAAAGATCAATGAGGCGAGCCAAACGTTAGCGTTCCCGG 505
Query 416 CTGGCGTTTGCCCTACGGTAGGAGTGGGTGGGCACATAAGCGGTGGAGGATTTGGAAATC 475
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 506 CTGGCGTTTGCCCTACGGTAGGAGTGGGTGGGCACATAACCGGTGGAGGATTTGGAAATC 565
Query 476 TGATGCGAAAATTCGGAATCACAGTGGATCATGTTATTGATGCTCAGTTAATTAACTG-C 534
||||| |||||||||||||||||||||||||||| |||||||||||||||||| || |
Sbjct 566 TGATGAGAAAATTCGGAATCACAGTGGATCATGTCATTGATGCTCAGTTAATT-GGTGTC 624
Query 535 AACGGCAAGCTCTTAGATCGAGCTACCATGGGAGAAGATCTCTTTTGGGCGATTCGCGGC 594
||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct 625 AACGGAAAGCTCTTGGATCGAGCTACCATGGGAGAAGATCTCTTTTGGGCCATTCGTGGC 684
Query 595 GGTGGTGGTGCGAGTTTCGGAGTTATCCTCTCTTGGAAAATCAACCTCGTCGAGGTTCCA 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 685 GGTGGTGGTGCGAGTTTCGGAGTTATCCTCTCTTGGAAAATCAACCTCGTCGAGGTTCCA 744
Query 655 AAGATTCTGACAGTGTTTAAGGTTCGTAAAACATTGGAACAAGGAGGCACTGATGTTCTC 714
||||| |||||||||||||||||| | |||||||||||||||||||| ||||||||||||
Sbjct 745 AAGATCCTGACAGTGTTTAAGGTTAGCAAAACATTGGAACAAGGAGGTACTGATGTTCTC 804
Query 715 TACAAGTGGCAGCTTGTTGCTTCCAAATTTCCTGAAGATCTTTTCATAAGAGCCTGGCCT 774
||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct 805 TACAAGTGGCAGCTTGTTGCTACCAAAGTTCCTGAAGATCTTTTCATAAGAGCCTGGCCT 864
Query 775 CAGATTGTAAAGGGAACAAAACTCGGCAAGAGAACCATCGCGGTTGTATTCTTTGCTCAG 834
||||||||||| ||||||||||||||| |||||||||| | ||||||||| |||||||||
Sbjct 865 CAGATTGTAAAAGGAACAAAACTCGGCGAGAGAACCATTGGGGTTGTATTTTTTGCTCAG 924
Query 835 TTTTTGGGTCCAACCGATAAGCTGATGGCGATAATGAGCCAGAGCTTGCCTGAACTAGGG 894
|||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||
Sbjct 925 TTTTTGGGTCCAACCGATAAGCTGATGGAGATAATGAGCCAAAGCTTGCCTGAATTAGGG 984
Query 895 CTAAGACGTGATGATTGTCACGAAATGAGCTGGTTTTACACAACGTTGTTTTGGGCCAAT 954
||||||||||| |||||||| ||||||||||||||| |||| ||||||||||||||||||
Sbjct 985 CTAAGACGTGAAGATTGTCATGAAATGAGCTGGTTTAACACGACGTTGTTTTGGGCCAAT 1044
Query 955 TATCCGGTTGGCACACCAA-AGCGCGTTCTTCTAGATAGACCGTCGAGTCCAGGAGAATT 1013
||||| || || ||||||| | ||||||||||||||||||||||||| ||||||||||||
Sbjct 1045 TATCCTGTAGGTACACCAACA-CGCGTTCTTCTAGATAGACCGTCGACTCCAGGAGAATT 1103
Query 1014 TTTCAAGAGCAAATCGGATAACATCAAAAAACCAATCCCAAAAGAGGGATTGGAGAAGAT 1073
|||||||||||| || |||||||| |||||||||||||||||||| ||||||||||||||
Sbjct 1104 TTTCAAGAGCAAGTCAGATAACATAAAAAAACCAATCCCAAAAGAAGGATTGGAGAAGAT 1163
Query 1074 TTGGAAGACAATGTTGAAATTTAACTTTG 1102
||||||||||||||||||||||||||||
Sbjct 1164 ATGGAAGACAATGTTGAAATTTAACTTTG 1192
Score = 466 bits (252), Expect = 3e-130
Identities = 324/358 (91%), Gaps = 7/358 (2%)
Strand=Plus/Plus
Query 1 ATGAAAGCATCACTCTCTGTTTTGTGTCTTGTTCTTTTGGTTTCGGTTTT-AGAAGCAGC 59
|||||||||| | |||||||||||||||||||||||||||||||| |||| || ||||||
Sbjct 1 ATGAAAGCATTATTCTCTGTTTTGTGTCTTGTTCTTTTGGTTTCGATTTTAAG-AGCAGC 59
Query 60 AGTAACAACAAAACCAAATTCTGGAATTTTCATCGGATGCCTTCGCAATCGGACTAGTCC 119
||| ||||||||| |||| ||||| |||| ||||||||||||||||||||||||||
Sbjct 60 AGT---GACAAAACCAGATTCCGGAATCTTCACCGGATGCCTTCGCAATCGGACTAGTCT 116
Query 120 GGAGAATCCAATCACCGATGCCATCTTCACC-GCCGATAACACCACCACCTTCTTGTCTT 178
||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||
Sbjct 117 GGAGAATCCAATCACCGATGCCATCTTCACCTCCCG-TAACACCACCACCTTCTTGTCTT 175
Query 179 CTTACGTGTCCTACACGAGAAACAAGAGGTACTCGAGCCCTAACTACCAAAAACTAATAG 238
|||||||||||||||||| |||||||||||||||||||| ||||||||| ||| || |||
Sbjct 176 CTTACGTGTCCTACACGAAAAACAAGAGGTACTCGAGCCTTAACTACCAGAAATTAGTAG 235
Query 239 CCATCGTAGCGGCAAAACATGTATCTCATGTTCAGGCCACTGTGATCTGCGCAAAAACCA 298
||||||| ||||| ||||||||||| |||||||||||||| ||| |||||||||| | |
Sbjct 236 CCATCGTGGCGGCTAAACATGTATCGCATGTTCAGGCCACGGTGGTCTGCGCAAAGGCTA 295
Query 299 ACGGTATTCAACTCCGTATCCGAAGCGGAGGTCATGACTACGAAGGCCTCTCTTACAC 356
||||||| |||||||||||||| || ||||||||||||||||||||||| ||||||||
Sbjct 296 ACGGTATACAACTCCGTATCCGTAGTGGAGGTCATGACTACGAAGGCCTTTCTTACAC 353
Score = 411 bits (222), Expect = 1e-113
Identities = 253/268 (94%), Gaps = 2/268 (1%)
Strand=Plus/Plus
Query 1102 GAAACAGAGAATAAGATGACTATGATGAAGGAGCTTTACGAAGTTGCGGGACCGTACGTG 1161
||||||||||||||| |||||||||||||||||||||| |||||||||||||| ||||||
Sbjct 1318 GAAACAGAGAATAAGCTGACTATGATGAAGGAGCTTTATGAAGTTGCGGGACCTTACGTG 1377
Query 1162 TCAAGTAACCCGAGAGAGGCGCTCTTAAATTTCAGAGACGTCGATATTGGAAGCAATCCG 1221
|||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||
Sbjct 1378 TCAAGTAACCCGAGAGAGGCGCTCTTTAATTTCAGAGACTTCGATATTGGAATCAATCCG 1437
Query 1222 AGTGGTGTGAACGTGGATGAAGCTAAGATCTATGGATACAAGTATTTCTTGGGGAATTTA 1281
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1438 AGTGGTTTGAACGTGGATGAAGCTAAGATCTATGGATACAAGTATTTCTTGGGGAATTTA 1497
Query 1282 AAGAGATTGATGGATATTAAAGCTAAGTGTGATGCTGAGAATTTCTTCAAAAACGAACAG 1341
||||||||||||||| ||||||||||||||||| |||| ||||||||||| ||||| |||
Sbjct 1498 AAGAGATTGATGGATGTTAAAGCTAAGTGTGATCCTGATAATTTCTTCAAGAACGAGCAG 1557
Query 1342 AGTATTTCT-CCTGCTCGTGTAATGTAG 1368
|||||| || |||||||| |||||||||
Sbjct 1558 AGTATT-CTTCCTGCTCGCGTAATGTAG 1584
> AT1G26420.1 | Symbols: | FAD-binding Berberine family protein
| chr1:9141567-9143304 REVERSE LENGTH=1738
Length=1738
Score = 878 bits (475), Expect = 0.0
Identities = 657/745 (88%), Gaps = 11/745 (1%)
Strand=Plus/Plus
Query 358 ACCTTGGGAGAGCTCTACACAAAGATCAATGAGGCGAGCCAAACGTTAGCGTTCCCTGCT 417
|||||||||||||| ||| |||||| || ||||| ||||||||| |||| || || |||
Sbjct 448 ACCTTGGGAGAGCTATACGTAAAGATTAACGAGGCAAGCCAAACGCTAGCATTTCCAGCT 507
Query 418 GGCGTTTGCCCTACGGTAGGAGTGGGTGGGCACATAAGCGGTGGAGGATTTGGAAATCTG 477
|||||||||||||| |||||||| || |||||||||||||||||||| | ||||||||||
Sbjct 508 GGCGTTTGCCCTACTGTAGGAGTAGGAGGGCACATAAGCGGTGGAGGGTATGGAAATCTG 567
Query 478 ATGCGAAAATTCGGAATCACAGTGGATCATGTTATTGATGCTCAGTTAATTAACTG-CAA 536
||| |||||||||||||||||||||||||||| | ||||||||| |||||| | || |||
Sbjct 568 ATGAGAAAATTCGGAATCACAGTGGATCATGTCAGTGATGCTCAATTAATTGA-TGTCAA 626
Query 537 CGGCAAGCTCTTAG-ATCGAGCTACCATGGGAGAAGATCTCTTTTGGGCGATTCGCGGCG 595
|||||||||||| | ||||||||| |||||||||||||||||||||||| || || ||||
Sbjct 627 CGGCAAGCTCTT-GAATCGAGCTAGCATGGGAGAAGATCTCTTTTGGGCCATCCGTGGCG 685
Query 596 GTGGTGGTGCGAGTTTCGGAGTTATCCTCTCTTGGAAAATCAACCTCGTCGAGGTTCCAA 655
||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct 686 GTGGTGGAGCGAGTTTTGGAGTTATCCTCTCTTGGAAAATCAACCTCGTCAAGGTTCCAA 745
Query 656 AGATTCTGACAGTGTTTAAGGTTCGTAAAACATTGGAACAAGGAGGCACTGATGTTCTCT 715
|||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 746 AGATCCTGACAGTGTTTAAGGTTAATAAAACATTGGAACAAGGAGGCACTGATGTTCTCT 805
Query 716 ACAAGTGGCAGCTTGTTGCTTCCAAATTTCCTGAAGATCTTTTCATAAGAGCCTGGCCTC 775
|||||||||||||||| ||| |||| || ||||||||||||||||| ||||| |||||||
Sbjct 806 ACAAGTGGCAGCTTGTCGCTACCAAGTTCCCTGAAGATCTTTTCATGAGAGCATGGCCTC 865
Query 776 AGATTGTAAAGGGAACAAAAC-TCGGCAAGAGAACCATCGCGGTTGTATTCTTTGCTCAG 834
|||| |||| ||| || ||| | ||| | ||||||||||| |||||||||| |||||||
Sbjct 866 AGATCATAAATGGAGCAGAACGT-GGCGATAGAACCATCGCAGTTGTATTCTATGCTCAG 924
Query 835 TTTTTGGGTCCAACCGATAAGCTGATGGCGATAATGAGCCAGAGCTTGCCTGAACTAGGG 894
|| ||||||||| | ||||||||| |||||||||||| |||| ||||||||||| |||||
Sbjct 925 TTCTTGGGTCCAGCTGATAAGCTGTTGGCGATAATGAACCAGCGCTTGCCTGAATTAGGG 984
Query 895 CTAAGACGTGATGATTGTCACGAAATGAGCTGGTTTTACACAACGTTGTTTTGGGCCAAT 954
||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||| ||
Sbjct 985 CTAAGACGTGAAGATTGTCACGAAATGAGCTGGTTTAACACGACGTTGTTTTGGGCCGAT 1044
Query 955 TATCCGGTTGGCACACCAAAGCGCGTTCTTCTAGATAGACCGTCGAGTCCAGGAGAATT- 1013
|| || | || ||||| ||| |||||||||||||||| || ||| ||||||| ||
Sbjct 1045 TACCCTGCAGGTACACCGAAGAGCGTTCTTCTAGATAGGCCAACGAATCCAGGA---TTC 1101
Query 1014 TTTCAAGAGCAAATCGGATAACATCAAAAAACCAATCCCAAAAGAGGGATTGGAGAAGAT 1073
||| ||||||||||| ||| | |||||||||||||||||||||| ||||| |||||| |
Sbjct 1102 TTT-AAGAGCAAATCAGATTATGTCAAAAAACCAATCCCAAAAGAAGGATTAGAGAAGCT 1160
Query 1074 TTGGAAGACAATGTTGAAATTTAAC 1098
||||||||||||||| || || |||
Sbjct 1161 TTGGAAGACAATGTTTAAGTTCAAC 1185
Score = 436 bits (236), Expect = 2e-121
Identities = 317/356 (89%), Gaps = 5/356 (1%)
Strand=Plus/Plus
Query 1 ATGAAAGCATCACTCTCTGTTTTGTGTCTTGTTCTTTTGGTTTCGGTTTTAGAAGCAGCA 60
||||||| | |||| ||| |||||||||||| ||||||||||||||||| |||||||| |
Sbjct 1 ATGAAAGAAGCACTTTCTATTTTGTGTCTTGCTCTTTTGGTTTCGGTTTCAGAAGCAGAA 60
Query 61 GTAACAACAAAACCAAATTCTGGAATTTTCATCGGATGCCTTCGCAATCGGACTAGTCCG 120
|| ||||||||||||||||| || |||||| | |||||||||| ||||||| ||| ||
Sbjct 61 GT---AACAAAACCAAATTCTGAAAATTTCATTGAATGCCTTCGCTATCGGACAAGTTCG 117
Query 121 GAGAATCCAATCACCGATGCCATCTTCACCGCCGATAACACCACCACCTTCTTGTCTTCT 180
|||||||||||||||||| |||||| || ||||||||||||||||||||||||||||||
Sbjct 118 GAGAATCCAATCACCGATTCCATCTCCATTGCCGATAACACCACCACCTTCTTGTCTTCT 177
Query 181 TACGTGTCCTACACGAGAAACAAGAGGTACTCGAGCCCTAACTACCAAAAACTAATAGCC 240
||| |||||||||||| |||||||||||||||||||||||||| | ||||| || |||||
Sbjct 178 TACTTGTCCTACACGAAAAACAAGAGGTACTCGAGCCCTAACTTCAAAAAATTACTAGCC 237
Query 241 ATCGTAGCGGCAAAACATGTATCTCATGTTCAGGCCACTGTGATCTGCGCAAAAACCAAC 300
||||||||||| ||||||||||||||||||||||| || ||| |||||||||| |||||
Sbjct 238 ATCGTAGCGGCGAAACATGTATCTCATGTTCAGGCAACAGTGGTCTGCGCAAAGACCAAT 297
Query 301 GGTATTCAACTCCGTATCCGAAGCGGAGGTCATGAC-TACGAAGGCCTCTCTTACA 355
||||| ||||| |||||||||||||| ||||||||| | ||||||||| |||||||
Sbjct 298 GGTATACAACTGCGTATCCGAAGCGGCGGTCATGACCT-CGAAGGCCTTTCTTACA 352
Score = 274 bits (148), Expect = 2e-72
Identities = 216/248 (87%), Gaps = 7/248 (3%)
Strand=Plus/Plus
Query 1122 TATGATGAAGGAGCTTTACGAA-GTTGCGGGACCGTACGTGTCAAGTAACCCGAGAGAGG 1180
||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||
Sbjct 1338 TATGATGAAGGAGCTTTAC-AAGGTTGCGGAACCGTACGTGTCAAGTAACCCGAGAGAGG 1396
Query 1181 CGCTCTTAAATTTCAGAGACGTCGATATTGGAAGCAATCCGAGTGGTGTG---AACGTGG 1237
| |||| |||| ||||||| |||||||||| || |||||||||| || | || ||||
Sbjct 1397 CATTCTTTAATTACAGAGACATCGATATTGGCAGTAATCCGAGTGATGAGACAAATGTGG 1456
Query 1238 ATGAAGCTAAGATCTATGGATACAAGTATTTCTTGGGGAATTTAAAGAGATTGATGGATA 1297
|||| || ||||||||||||||||||||||||||||||||||| |||||| | ||| | |
Sbjct 1457 ATGAGGCAAAGATCTATGGATACAAGTATTTCTTGGGGAATTTGAAGAGACTCATGCA-A 1515
Query 1298 TT-AAAGCTAAGTGTGATGCTGAGAATTTCTTCAAAAACGAACAGAGTATTTCTCCTGCT 1356
| |||||||| | |||| |||||||||||||||| ||||| ||||||||| |||||| |
Sbjct 1516 GTCAAAGCTAAATATGATCCTGAGAATTTCTTCAAGAACGAGCAGAGTATTCCTCCTGTT 1575
Query 1357 CGTGTAAT 1364
||||||||
Sbjct 1576 CGTGTAAT 1583
> AT1G26380.1 | Symbols: | FAD-binding Berberine family protein
| chr1:9126737-9128528 REVERSE LENGTH=1792
Length=1792
Score = 821 bits (444), Expect = 0.0
Identities = 655/754 (87%), Gaps = 25/754 (3%)
Strand=Plus/Plus
Query 356 CGACCTTGGGAGAGCTCTACACAAAGATCAATGAGGCGAGCCAAACGTTAGCGTTCCCTG 415
|||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||
Sbjct 466 CGACCTTGGGAGAGCTCTACGTGAAGATCGATGAGGCAAGCCAAACGTTAGCGTTCCCTG 525
Query 416 CTGGCGTTTGCCCTACGGTAGGAG-TGGGTGGGCACATAAGCGGTGGAGGATTTGGAAAT 474
||||| ||||| |||||||||||| | || || ||||||||||||||||| | |||||||
Sbjct 526 CTGGCATTTGCGCTACGGTAGGAGCT-GGAGGACACATAAGCGGTGGAGGGTATGGAAAT 584
Query 475 CTGATGCGAAAATTCGGAATCACAGTGGATCATGTTATTGATGCTCAGTTAATTAACTG- 533
|||||| |||||||||||| ||||||||||||||| ||||||||| | ||| || | ||
Sbjct 585 CTGATGAGAAAATTCGGAACCACAGTGGATCATGTCATTGATGCTGAATTAGTTGA-TGT 643
Query 534 CAACGGCAAGCTCTTAG-ATCGAGCTACCATGGGAGAAGATCTCTTTTGGGCGATTCGCG 592
||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||
Sbjct 644 CAACGGCAAGCTCTT-GAATCGATCTACCATGGGAGAAGATCTCTTTTGGGCGATTCGCG 702
Query 593 GCGGTGGTGGTGCGAGTTTCGGAGTTATCCTCTCTTGGAAAATCAACCTCGTCGAGGTTC 652
|||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||
Sbjct 703 GCGGTGGTGGTGCGAGTTTCGGAGTTATACTCTCTTGGAAAATAAACCTCGTGGAGGTTC 762
Query 653 CAAAGAT-TCTGACAGTGTTTAAGGTTCGTAAAACATTGGAACAAGGAGGCACTGATGTT 711
||||||| | | ||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct 763 CAAAGATCTTT-ACAGTGTTTCAGGTTAACAAAACATTGGAACAAGGAGGCACTGATGTT 821
Query 712 CTCTACAAGTGGCAGCTTGTTGCTTCCAAATTTCCTGA-AGATCTTTTCATAAGAGCC-T 769
||||||||||||||||||| ||| |||||| ||||| | |||||||| | ||||| |
Sbjct 822 GTCTACAAGTGGCAGCTTGTCGCTAACAAATTCCCTGATA-ATCTTTTCTTGAGAGCAAT 880
Query 770 GGCCTCAGATTGTAAAGGGAACAAAACTCGGCAAGAGAACCATCGCGGTTGTATTCTTTG 829
| |||||| | ||||| |||||||||| |||| |||||||||||||| ||||||||| |
Sbjct 881 G-CCTCAGGTAGTAAATGGAACAAAACACGGCGAGAGAACCATCGCGATTGTATTCTGGG 939
Query 830 CTCAGTTTTTGGGTCCAACCGATAAGCTGATGGCGATAATGAGCCAGAGCTTGCCTGAAC 889
||||||| ||||||| ||||||| ||||||||| |||||||| ||||||||| ||||||
Sbjct 940 CTCAGTTCTTGGGTCGAACCGATGAGCTGATGGAGATAATGAACCAGAGCTTTCCTGAAT 999
Query 890 TAGGGCTAAGACGTGATGATTGTCACGAAATGAGCTGGTTTTACACAACGTTGTTTTGGG 949
|||||||||||||||| |||||||| |||||||||||| || |||| |||||||||||||
Sbjct 1000 TAGGGCTAAGACGTGAAGATTGTCAAGAAATGAGCTGGCTTAACACGACGTTGTTTTGGG 1059
Query 950 CCAA-TTATCCGGTTGGCACACCAAAG-CGCGTTCTTCTAGATAGACCGT-CG-AGTCCA 1005
| | ||| || | || || || ||| | ||| ||||||| |||||| | || | ||||
Sbjct 1060 CTATGTTA-CCAGCGGGTACTCCGAAGAC-CGTCCTTCTAGGTAGACC-TACGGA-TCCA 1115
Query 1006 GGAGAATT-TTTCAAGAGCAAATCGGATAACATCAAAAAACCAATCCCAAAAGAGGGATT 1064
| | || ||| ||||| ||||||||| || ||||||| |||||||| ||||| ||| |
Sbjct 1116 GTA---TTCTTT-AAGAGTAAATCGGATTACGTCAAAAAGCCAATCCCCAAAGAAGGACT 1171
Query 1065 GGAGAAGATTTGGAAGACAATGTTGAAATTTAAC 1098
|||||||||||||||||||||||||||||| |||
Sbjct 1172 GGAGAAGATTTGGAAGACAATGTTGAAATTCAAC 1205
Score = 379 bits (205), Expect = 3e-104
Identities = 309/358 (86%), Gaps = 11/358 (3%)
Strand=Plus/Plus
Query 1 ATGAAAGCATCACTCTCTGTTTTGTGTCTTGTTCTTTTGGTTTCGGTTTTAGAAGCAGCA 60
||||||| | |||| | || ||||| |||||||||||||||||||| ||||||||||||
Sbjct 21 ATGAAAGAAGCACTTTTTGGTTTGTATCTTGTTCTTTTGGTTTCGGGCTTAGAAGCAGCA 80
Query 61 GTAACAACAAAACCAAATTCTGG-AATTTTCATCGGATGCCTTCGCAATC-GGACTAGTC 118
|| || |||||||||||||| || ||| || | ||||||||| ||| || ||||||
Sbjct 81 GT---GACGAAACCAAATTCTGGAAACTTT-ATTGAATGCCTTCGGTATCAGG-CTAGTC 135
Query 119 CGGAGAATCCAATCACCGATGCCATCTTCACCGCCGATAACACCACCACCTTCTTGTCTT 178
|||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||
Sbjct 136 CGGAGAATCCAATCACCGATGCCATCTTTACCGTCGATAACACCACCACCTTCTTGTCTT 195
Query 179 CTTACGTGTCCTACACGAGAAACAAGAGGTACTCGAGCCCTAACTACCAAAAAC-TAATA 237
|||||||||| ||||||| ||||| ||||| ||||| ||||||| || |||||| || ||
Sbjct 196 CTTACGTGTCATACACGAAAAACACGAGGTTCTCGAACCCTAACAAC-AAAAACCTACTA 254
Query 238 GCCATCGTAGCGGCAAAACATGTATCTCATGTTCAGGCCACTGTGATCTGCGCAAAAACC 297
|||||||||| ||| ||| ||||||||||||||||||| || ||| |||||||||| ||
Sbjct 255 GCCATCGTAGTGGCGAAAGATGTATCTCATGTTCAGGCAACGGTGGTCTGCGCAAAGTCC 314
Query 298 AACGGTATTCA-ACTCCGTATCCGAAGCGGAGGTCATGACTACGAAGGCCTCTCTTAC 354
|| ||||| || | |||||||||||||||| ||||||||| ||||||| || ||||||
Sbjct 315 AATGGTATCCAGA-TCCGTATCCGAAGCGGTGGTCATGACAACGAAGGACTTTCTTAC 371
Score = 307 bits (166), Expect = 2e-82
Identities = 221/247 (89%), Gaps = 5/247 (2%)
Strand=Plus/Plus
Query 1105 ACAGAGAATAAGATGACTATGATGAAGGAGCTTTACGAAGTTGCGGGACCGTACGTGTCA 1164
||||||| ||| ||| ||| ||||||||||| ||||| ||||| | |||||||||||||
Sbjct 1341 ACAGAGAGTAACCTGAGTATTATGAAGGAGCTCTACGAGGTTGCAGAACCGTACGTGTCA 1400
Query 1165 AGTAACCCGAGAGAGGCGC-TCTTAAATTTCAGAGACGTCGATATTGGAAGCAATCCGAG 1223
||||||||||||||||| | |||| |||| ||||||| | ||||||||||||||||| ||
Sbjct 1401 AGTAACCCGAGAGAGGC-CTTCTTTAATTACAGAGACATTGATATTGGAAGCAATCCAAG 1459
Query 1224 TGGTGTG--A-ACGTGGATGAAGCTAAGATCTATGGATACAAGTATTTCTTGGGGAATTT 1280
|||| | | |||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1460 CGGTGAGACAGACGTGGATGAGGCTAAGATCTATGGATACAAGTATTTCTTGGGGAATTT 1519
Query 1281 AAAGAGATTGATGGATATTAAAGCTAAGTGTGATGCTGAGAATTTCTTCAAAAACGAACA 1340
||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||
Sbjct 1520 GAAGAGATTGATGGATGTTAAAGCTAAGAGTGATCCTGAGAATTTCTTCAAAAACGAACA 1579
Query 1341 GAGTATT 1347
|||||||
Sbjct 1580 GAGTATT 1586
> AT1G26390.1 | Symbols: | FAD-binding Berberine family protein
| chr1:9130017-9131779 REVERSE LENGTH=1763
Length=1763
Score = 813 bits (440), Expect = 0.0
Identities = 650/751 (87%), Gaps = 16/751 (2%)
Strand=Plus/Plus
Query 356 CGACCTTGGGAGAGCTCTACACAAA-GATCAATGAGGCGAGCCAAACGTTAGCGTTCCCT 414
||||||||||||||||||||||||| | ||||||| | |||||||| |||| |||||
Sbjct 469 CGACCTTGGGAGAGCTCTACACAAACG-TCAATGACGTAAGCCAAACACTAGCTTTCCCG 527
Query 415 GCTGGCGTTTGCCCTACGGTAGGAG-TGGGTGGGCACATAAGCGGTGGAGGATTTGGAAA 473
|||||||||||| |||| ||||||| | |||||||||||||| |||||||| | ||||||
Sbjct 528 GCTGGCGTTTGCGCTACCGTAGGAGCT-GGTGGGCACATAAGTGGTGGAGGGTATGGAAA 586
Query 474 TCTGATGCGAAAATTCGGAATCACAGTGGATCATGTTATTGATGCTCAGTTAATTAACTG 533
||| ||| |||||| ||||||||| ||||||||||| ||||||||||| ||||| | ||
Sbjct 587 TCTAATGAGAAAATACGGAATCACTGTGGATCATGTCATTGATGCTCAAATAATTGA-TG 645
Query 534 -CAACGGCAAGCTCTTAG-ATCGAGCTACCATGGGAGAAGATCTCTTTTGGGCGATTCGC 591
||||||||||||||| | |||||||||||||||||||||||||||||||||| || ||
Sbjct 646 TCAACGGCAAGCTCTT-GAATCGAGCTACCATGGGAGAAGATCTCTTTTGGGCAATCCGT 704
Query 592 GGCGGTGGTGGTGCGAGTTTCGGAGTTATCCTCTCTTGGAAAATCAACCTCGTCGAGGTT 651
|||||||| |||| |||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct 705 GGCGGTGGCGGTGGGAGTTTTGGAGTTATCCTCTCTTGGAAAATCAACCTCGTCGATGTT 764
Query 652 CCAAAGATTC-TGACAGTGTTTAAGGTTCGTAAAACATTGGAACAAGGAGGCACTGATGT 710
||||||| || ||||||| ||||||||| |||||| ||||||||||||||||||||||
Sbjct 765 CCAAAGA-TCGTGACAGTATTTAAGGTTAACAAAACACTGGAACAAGGAGGCACTGATGT 823
Query 711 TCTCTACAAGTGGCAGCTTGTTGCTTCCAAATTTCCTGAA-GATCTTTTCATAAGAGCC- 768
||||||||||||||||||||| ||| |||||| |||||| | ||||||| | |||||
Sbjct 824 TCTCTACAAGTGGCAGCTTGTCGCTAGCAAATTCCCTGAAAG-TCTTTTCGTGAGAGCAA 882
Query 769 TGGCCTCAGATTGTAAAGGGAACAAAACTCGGCAAGAGAACCATCGCGGTTGTATTCTTT 828
|| |||||| | | ||| |||||||||| ||| ||||||||||| | |||||||||| |
Sbjct 883 TG-CCTCAGGTAGCAAATGGAACAAAACGCGGGGAGAGAACCATCACTGTTGTATTCTAT 941
Query 829 GCTCAGTTTTTGGGTCCAACCGATAAGCTGATGGCGATAATGAGCCAGAGCTTGCCTGAA 888
|||||||| ||||||| ||||||| ||||||||| ||||||| ||| | || |||||||
Sbjct 942 GCTCAGTTCTTGGGTCGAACCGATGCGCTGATGGCTATAATGAACCAAAACTGGCCTGAA 1001
Query 889 CTAGGGCTAAGACGTGATGATTGTCACGAAATGAGCTGGTTTTACACAACGTTGTTTTGG 948
|||||||||| || ||| |||||||| |||||||||||| || || ||||||||||||||
Sbjct 1002 CTAGGGCTAAAACATGAAGATTGTCAAGAAATGAGCTGGCTTAACTCAACGTTGTTTTGG 1061
Query 949 GCCA-ATTATCCGGTTGGCACACCAAAGCGCGTTCTTCTAGATAGACCGTCGAGTCCAGG 1007
|| | ||||||| | || || || | | || ||||||||||||||||||||||||||||
Sbjct 1062 GC-AGATTATCCAGCCGGTACCCCGACGAGCATTCTTCTAGATAGACCGTCGAGTCCAGG 1120
Query 1008 AGAATTTTTCAAGAGCAAATCGGATAACATCAAAAAACCAATCCCAAAAGAGGGATTGGA 1067
||| |||||||| || ||||| ||| | |||||||||||||||| ||||| ||||||||
Sbjct 1121 AGATTTTTTCAAAAGTAAATCAGATTATGTCAAAAAACCAATCCCCAAAGAAGGATTGGA 1180
Query 1068 GAAGATTTGGAAGACAATGTTGAAATTTAAC 1098
|||| |||||||||||||||||||||| |||
Sbjct 1181 GAAGCTTTGGAAGACAATGTTGAAATTCAAC 1211
Score = 398 bits (215), Expect = 9e-110
Identities = 312/358 (87%), Gaps = 9/358 (3%)
Strand=Plus/Plus
Query 1 ATGAAAGCATCACTCTCTGTTTTGTGTCTTGTTCTTTTGGTTTCGGTTTTAGAAGCAGCA 60
||||||| | |||| || |||||||||||||| ||| ||||||||||||| |||||||||
Sbjct 24 ATGAAAGGAACACTTTCAGTTTTGTGTCTTGTACTTCTGGTTTCGGTTTTGGAAGCAGCA 83
Query 61 GTAACAACAAAACC-AAATTCTGGA-ATTTTCATCGGATGCCTTCGCAATCGGACTAGTC 118
|| ||||||||| ||||| |||| | |||||||| ||||||||| |||| |||||||
Sbjct 84 GT---AACAAAACCAAAATT-TGGAGA-CTTCATCGGGTGCCTTCGCTATCGTACTAGTC 138
Query 119 CGGAGAATCCAATCACCGATGCCATCTTCACCGCCGATAACACCACCACCTTCTTGTCTT 178
||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct 139 CGGAGAATCCAATCACCGATGCCATCTCCTTCGCCGATAACACCACCACCTTCTTGTCTT 198
Query 179 CTTACGTGTCCTACACGAGAAACAAGAGGTACTCGAGCCCTAACTACCAAAAA-CTAATA 237
|||||||||| ||||| | |||||| |||| ||||| |||||| || | ||| ||| ||
Sbjct 199 CTTACGTGTCATACACTAAAAACAAAAGGTTCTCGACCCCTAATTAT-AGAAAGCTACTA 257
Query 238 GCCATCGTAGCGGCAAAACATGTATCTCATGTTCAGGCCACTGTGATCTGCGCAAAAACC 297
|||||||| || ||||||||||||||||||||||||||||| ||| |||||||||| ||
Sbjct 258 GCCATCGTGGCCGCAAAACATGTATCTCATGTTCAGGCCACGGTGGTCTGCGCAAAGTCC 317
Query 298 AACGGTATTCAACTCCGTATCCGAAGCGGAGGTCATGACTACGAAGGCCTCTCTTACA 355
|| ||||| || |||||||| |||||||| ||||||||||| |||||||| |||||||
Sbjct 318 AATGGTATCCAGCTCCGTATACGAAGCGGCGGTCATGACTATGAAGGCCTTTCTTACA 375
Score = 313 bits (169), Expect = 4e-84
Identities = 222/247 (90%), Gaps = 5/247 (2%)
Strand=Plus/Plus
Query 1126 ATGAAGGAGCTTTACGAAGTTGCGGGACCGTACGTGTCAAGTAACCCGAGAGAGGCGCTC 1185
||||||||||||||||| ||||| | |||||||||||||||||||||||||||||| ||
Sbjct 1371 ATGAAGGAGCTTTACGAGGTTGCTGAACCGTACGTGTCAAGTAACCCGAGAGAGGC-CTT 1429
Query 1186 TTA-AATTTCAGAGACGTCGATATTGGAAGCAATCCGAGTGGTGTGA-A--CGTGGATGA 1241
|| |||| |||||| ||||| ||||||||||||||||||||| || | |||||||||
Sbjct 1430 TTTTAATTACAGAGATATCGATGTTGGAAGCAATCCGAGTGGTGAGACAAACGTGGATGA 1489
Query 1242 AGCTAAGATCTATGGATACAAGTATTTCTTGGGGAATTTAAAGAGATTGATGGATATTAA 1301
||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||
Sbjct 1490 AGCTAAGATCTATGGATCCAAGTATTTCTTGGGGAATTTGAAGAGATTGATGGATGTTAA 1549
Query 1302 AGCTAAGTGTGATGCTGAGAATTTCTTCAAAAACGAACAGAGTATTTCTCCTGCTCGTGT 1361
|||||||| |||| |||| ||||||||||||||||||||||| ||| |||| | ||||||
Sbjct 1550 AGCTAAGTATGATCCTGATAATTTCTTCAAAAACGAACAGAGCATTCCTCCGGTTCGTGT 1609
Query 1362 AATGTAG 1368
|||||||
Sbjct 1610 AATGTAG 1616
> AT1G26410.1 | Symbols: | FAD-binding Berberine family protein
| chr1:9138675-9140439 REVERSE LENGTH=1765
Length=1765
Score = 754 bits (408), Expect = 0.0
Identities = 644/755 (85%), Gaps = 27/755 (4%)
Strand=Plus/Plus
Query 356 CGACCTTGGGAGAGCTCTACACAAAGATCAATGAGGCGAGCCAAACGTTAGCGTTCCCTG 415
|||| ||||||||||||||| ||||||||||||||| ||||||||| |||||||||| |
Sbjct 525 CGACATTGGGAGAGCTCTACGTAAAGATCAATGAGGCAAGCCAAACGCTAGCGTTCCCGG 584
Query 416 CTGGCGTTTGCCCTACGGTAGGAG-TGGGTGGGCACATAAGCGGTGGAGGATTTGGAAAT 474
||||||| |||||||||||||||| ||| || ||||||||||||||||| |||||||||
Sbjct 585 CTGGCGTGTGCCCTACGGTAGGAGCAGGG-GGACACATAAGCGGTGGAGGGTTTGGAAAT 643
Query 475 CTGATGCGAAAATTCGGAATCACAGTGGATCATGTTATTGATGCTCAGTTAATTAACTG- 533
|||||| ||||||||||||||||||| |||||||| ||||| || || | ||| | ||
Sbjct 644 CTGATGAGAAAATTCGGAATCACAGTAGATCATGTCATTGACGCACAAATCATTGA-TGT 702
Query 534 CAACGGCAAGCTCTTAG-ATCGAGCTACCATGGGAGAAGATCTCTTTTGGGCGATTCGCG 592
||| ||||||||||| | |||||||| |||||||||||||||||||||||||||||||||
Sbjct 703 CAATGGCAAGCTCTT-GAATCGAGCTGCCATGGGAGAAGATCTCTTTTGGGCGATTCGCG 761
Query 593 GCGGTGGTGGTGCGAGTTTCGGAGTTATCCTCTCTTGGAAAATCAACCTCGTCGAGGTTC 652
| |||||| | | ||||| |||||||| || |||||||||||||||||||| |||||||
Sbjct 762 GTGGTGGT--T-CAAGTTTTGGAGTTATTCTATCTTGGAAAATCAACCTCGTGGAGGTTC 818
Query 653 CAAAGATTCTGACAGTGTTTAAGGTTCGTAAAACATTGGAACAAGGAGGCACTGATGTTC 712
||||||| |||||||||||||||||| |||||||| |||||||||||||||||| |||
Sbjct 819 CAAAGATCCTGACAGTGTTTAAGGTTAACAAAACATTAGAACAAGGAGGCACTGATATTC 878
Query 713 TCTACAAGTGGCAGCTTGTTGCTTCCAAATTTCCTGA-AGATCTTTTCATAAGAGCCTGG 771
| ||||||||||||||||| ||| ||| | ||||| || ||||||||||| ||| |||
Sbjct 879 TTTACAAGTGGCAGCTTGTCGCTAATAAACTACCTGATAG-TCTTTTCATAACAGCATGG 937
Query 772 CCTCAG-ATTGTAAAGGGAACAAAACTCGGCAAGAGAACCATCGCGGTTGTATTCTTTGC 830
||| || | ||||| ||| |||||| |||| |||||||| ||||||||||||||| |||
Sbjct 938 CCT-AGGACCGTAAATGGACCAAAACCCGGCGAGAGAACCGTCGCGGTTGTATTCTATGC 996
Query 831 TCAGTTTTTGGGTCCAACCGATAAGCTGATGGCGATAATG-AGCCAGAGCTTGCCTGAAC 889
|||||| ||||||||||| ||||||||||||| ||||||| | ||||||||| ||||||
Sbjct 997 TCAGTTCTTGGGTCCAACAGATAAGCTGATGGAGATAATGGA-CCAGAGCTTCCCTGAAT 1055
Query 890 TAGGGCTAAGACGTGATGATTGTCACGAAATGAGCTGGTTTTACACAACGTTGTTTTGGG 949
||||| || ||||||| ||||| ||||||||||||||| || ||||||||||||||||||
Sbjct 1056 TAGGGTTAGGACGTGAAGATTGCCACGAAATGAGCTGGCTTAACACAACGTTGTTTTGGG 1115
Query 950 CCAATTATCCGGTTGGCACACCAAAGCGCGTTCTTCTAGATAGACCGTC-GA-G--TCCA 1005
||||||| |||| || ||||| ||| || | ||||||||||| || || || | | ||
Sbjct 1116 CCAATTACCCGGCGGGTACACCCAAGAGCATCCTTCTAGATAGGCC-TCCGACGAATTCA 1174
Query 1006 G-GAGAATTTTTCAAGAGCAAATCGGATAACATCAAAAAACCAAT-CCCAAAAGAGGGAT 1063
| | | ||| ||||| ||||||||| ||||||||||||| ||||||| ||| |
Sbjct 1175 GTGTCA-TTT---AAGAGTAAATCGGATTTTGTCAAAAAACCAATACCCAAAAAAGGT-T 1229
Query 1064 TGGAGAAGATTTGGAAGACAATGTTGAAATTTAAC 1098
| |||||| |||||||||||||||| ||||| |||
Sbjct 1230 TAGAGAAGCTTTGGAAGACAATGTTTAAATTCAAC 1264
Score = 383 bits (207), Expect = 3e-105
Identities = 308/356 (87%), Gaps = 9/356 (3%)
Strand=Plus/Plus
Query 3 GAAAGCATCACTCTCTGTTTTGTGTCTTGTTCTT-TTGGTTTCGGTTT-TAGAAGCAGCA 60
||||| | |||| | ||||||| ||||||||||| || ||||| |||| |||||||| ||
Sbjct 82 GAAAGAAACACTTTATGTTTTGGGTCTTGTTCTTCTT-GTTTC-GTTTATAGAAGCACCA 139
Query 61 GTAACAACAAAACCAAATTCTGGAATTTTCATCGGATGCCTTCGCAATCGGACTAGTCCG 120
|| ||||||||||||| ||||| ||||||| |||||| ||| ||||||||| ||||
Sbjct 140 GT---GACAAAACCAAATTTTGGAAAGTTCATCGAATGCCTACGCGATCGGACTACTCCG 196
Query 121 GAGAATCCAATCACCGATGCCATCTTCACCGCCGATAACACCACCACCTTCTTGTCTTCT 180
||||||||||||||||||| ||||| || ||||||||| ||||||||||||||||||||
Sbjct 197 GAGAATCCAATCACCGATGTCATCTCCATCGCCGATAATTCCACCACCTTCTTGTCTTCT 256
Query 181 TACGTGTCCTACACGAGAAACAAGAGGTACTCGAGCCCTAACTACCAAAAACTAATAGCC 240
|||||||| ||||||| ||||||||||| |||||||||||||| | |||||||| |||||
Sbjct 257 TACGTGTCATACACGAAAAACAAGAGGTTCTCGAGCCCTAACTTCAAAAAACTACTAGCC 316
Query 241 ATCGTAGCGGCAAAACATGTATCTCATGTTCAGGCCACTGT-GATCTGCGCAAAAACCAA 299
||| ||||||| |||||||||||||||||||||||||| || | |||||||||| ||||
Sbjct 317 ATCATAGCGGCGAAACATGTATCTCATGTTCAGGCCACGGTAG-TCTGCGCAAAGTCCAA 375
Query 300 CGGTATTCAACTCCGTATCCGAAGCGGAGGTCATGACTACGAAGGCCTCTCTTACA 355
||||| || ||||||||||||||||| ||||||||| |||| || | |||||||
Sbjct 376 TGGTATCCAGCTCCGTATCCGAAGCGGTGGTCATGACAACGAGGGTTTTTCTTACA 431
Score = 307 bits (166), Expect = 2e-82
Identities = 236/269 (88%), Gaps = 7/269 (3%)
Strand=Plus/Plus
Query 1105 ACAGAGAATAAG-ATGACTATGATGAAGGAGCTTTACGAAGTTGCGGGACCGTACGTGTC 1163
||||||| | || || |||||||||| ||||||| || || |||| ||||||||||||
Sbjct 1400 ACAGAGAGT-AGCCTGGCTATGATGAATGAGCTTTTTGAGGTGGCGGAACCGTACGTGTC 1458
Query 1164 AAGTAACCCGAGAGAGGCGC-TCTTAAATTTCAGAGACGTCGATATTGGAAGCAATCCGA 1222
|||||||||||||||||| | |||| |||||||||||| ||||||||||||||||||| |
Sbjct 1459 AAGTAACCCGAGAGAGGC-CTTCTTTAATTTCAGAGACATCGATATTGGAAGCAATCCAA 1517
Query 1223 GTGGTGTG---AACGTGGATGAAGCTAAGATCTATGGATACAAGTATTTCTTGGGGAATT 1279
|||||| | ||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct 1518 GTGGTGAGACAAACGTGGATGAAGCTAAGATCTACGGATCCAAGTATTTCTTGGGGAATT 1577
Query 1280 TAAAGAGATTGATGGATATTAAAGCTAAGTGTGATGCTGAGAATTTCTTCAAAAACGAAC 1339
| ||||||||||||||| |||||||||||| |||| |||| ||||||||||| ||||| |
Sbjct 1578 TGAAGAGATTGATGGATGTTAAAGCTAAGTATGATCCTGATAATTTCTTCAAGAACGAGC 1637
Query 1340 AGAGTATTTCTCCTGCTCGTGTAATGTAG 1368
|||||||| |||| | |||||||| ||||
Sbjct 1638 AGAGTATTCCTCCGGTTCGTGTAAAGTAG 1666
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 67369131390
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5