BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg912415
Length=1332
Score E
Sequences producing significant alignments: (Bits) Value
AT1G26360.1 | Symbols: ATMES13, MES13 | methyl esterase 13 | ch... 2137 0.0
AT1G69240.1 | Symbols: ATMES15, MES15, RHS9 | methyl esterase 1... 974 0.0
> AT1G26360.1 | Symbols: ATMES13, MES13 | methyl esterase 13 |
chr1:9118948-9121217 REVERSE LENGTH=1422
Length=1422
Score = 2137 bits (1157), Expect = 0.0
Identities = 1275/1333 (96%), Gaps = 3/1333 (0%)
Strand=Plus/Plus
Query 1 ATGGGGAACTCGTTCACATGCATATCTCACGAGCAAGAACAACGTCCCAAGAAATCCTCC 60
||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct 15 ATGGGGAACTCGTTCACATGCATATCTCACGAGCAGGAACAACGTCCCAAGAAATCTTCC 74
Query 61 GGCGGAGGAAGAAGTAACTCCGGGAAATACAAATACGTGCGTCGTCTGTCGCTGATGCCT 120
||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GGCGGAGGAGGAAATAACTCCGGGAAATACAAATACGTGCGTCGTCTGTCGCTGATGCCT 134
Query 121 TCATTTAGAAGGCGGACGCTACTTCCTTCGCTCTCCTGCTCTGGATCATCATCCACTACG 180
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 135 TCATTTAGAAGGAGGACGCTACTTCCTTCGCTCTCCTGCTCTGGATCATCATCCACTTCG 194
Query 181 TCGTCCAAGAAAGGCGGGATCAAAGCAAAGACGAAGAAGATAAGAGAGAG--A-CATCAT 237
|| ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct 195 TCTTCCAAGAAAGGCGGGATCAAAGCAAAGACGAAGAAGATAAGAGAGAGACATCATCAT 254
Query 238 CATCATCAAGACCACGAAAAAGACTCTCATATAATTCAGGAGCAAACACTAGCAGCCACT 297
|||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct 255 CATCATCAAGACCACGAAAAAGACTCTCATATAATTCAAGAGCAGACACTAGCAGCCACT 314
Query 298 AATCTCCTCTTCAACCAAACCCCTCGTAGCAGCAACTCTGTTGTTCCTCCTAGTTTCAGA 357
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 315 AATCTCCTCTTCAACCAAACCCCTCGTAACAGCAACTCTGTTGTTCCTCCTAGTTTCAGA 374
Query 358 CGCTCCACCTCCGTTGTCTATCCCTCGGCTCAGCCATCGGGTACCAGCTCAGGACCTGTT 417
||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||| |||
Sbjct 375 CGCTCCACCTCTGTTGTATATCCCTCTGCTCAGCCATCGGGTACCAGCTCAGGACCCGTT 434
Query 418 TTAGCGGTCCAGACTCCTAAGAAGTCAAACGCGGGATTCGTAAGAAGCTCTAGCTCTAGA 477
| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 435 TCAGCCGTCCAGACTCCTAAGAAGTCAAGCGCGGGATTCGTAAGAAGCTCTAGCTCTAGG 494
Query 478 CAAAGGTCCAGTACCGATCCCTTGATCAAGCCTAACCAGCTCGTTGACAAGGAGCTAAAT 537
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 495 CAAAGGTCCAGTACCGATCCCATGATCAAGCCTAACCAGCTCGTTGACAAGGAGCTAAAT 554
Query 538 AAGGTGGAAGGTTCGGAGACGAAGCGGTTCGTGCTGGTTCATGGTGGTGGATTCGGAGCA 597
||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct 555 AAGGTGGAAGGTTCGGAGACGAAGCGGTTTGTGCTGGTTCATGGTGGTGGGTTCGGAGCT 614
Query 598 TGGTGTTGGTACAAAACCATAACGCTCTTAGAGAAACATGGTTTCCAAGTCGATGCTGTT 657
||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||
Sbjct 615 TGGTGTTGGTACAAAACCATAACTCTTTTAGAGAAGCATGGTTTCCAAGTCGATGCTGTT 674
Query 658 GACTTGACCGGTTCAGGTGTGAGCTCTATTGACACCAACAACATCACCAGCCTTGCTCAC 717
|| ||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||
Sbjct 675 GAGTTGACCGGTTCAGGTGTGAGCTCGATTGACACAAACAACATCACCAGCCTCGCTCAC 734
Query 718 TACTCCAAGCCTCTCCTCCACTTCTTTGAATCCCTTAAACCCACCGAGAAGGTGATATTG 777
|||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||| ||
Sbjct 735 TACTCCAAGCCTCTCCTCCATTTCTTCGAATCCCTCAAACCCACCGAGAAGGTGATACTG 794
Query 778 GTGGGGCATGATTTTGGAGGAGCTTGTATGTCTTATGCTATGGAAATGTTCCCTACTAAG 837
||||| |||||||||||||||||||||||||| ||||| ||||| ||||| ||||| |||
Sbjct 795 GTGGGACATGATTTTGGAGGAGCTTGTATGTCCTATGCGATGGAGATGTTTCCTACAAAG 854
Query 838 ATCGCCAAAGCTGTCTTTATCTCTGCTGCTATGTTGGCTAATGGCCAGAGCACTCTTGAT 897
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 855 ATCGCCAAAGCTGTCTTTATCTCTGCTGCTATGTTGGCTAATGGCCAAAGCACTCTTGAT 914
Query 898 CTCTTTAATCAACAGGTGGGGTCAAATGATCTGATGCAACAAGCACAGATCTTTCTATAC 957
||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||
Sbjct 915 CTCTTTAATCAACAGCTGGGGTCAAATGATCTGATGCAACAAGCACAGATATTTCTGTAC 974
Query 958 GCCAACGGCAAAAAGAATCCTCCAACAGCCGTTGATTTCGACAGATCTTTGCTTAGAGAC 1017
|||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct 975 GCCAACGGCAAAAAGAATCCTCCAACTGCCGTTGATTTTGACAGATCTTTGCTTAGAGAC 1034
Query 1018 TTTCTCTTCAATCAAAGCCCTCCAAAGGACCTCGCATTGGCCTCGGTATCCATTAGACCG 1077
|||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1035 TTTCTCTTTAATCAAAGCCCTCCAAAGGACCTCGCATTGGCATCGGTATCCATTAGACCG 1094
Query 1078 ATCCCGTTCGCACCGGTCAGCGAAAAAGTTCACTTGTCGGAGAAAAACTACGGTTCTATC 1137
||||| |||||||||||||||||||| |||||| ||||||||||||||||||||||||||
Sbjct 1095 ATCCCATTCGCACCGGTCAGCGAAAAGGTTCACGTGTCGGAGAAAAACTACGGTTCTATC 1154
Query 1138 CGACGGTTCTACATCAAAACCATGGAGGATTACGCTGTACCGGTTCTTCTCCAGGAAGCA 1197
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1155 CGACGGTTCTACATCAAAACCATGGAAGATTACGCTGTACCGGTTCTTCTCCAGGAAGCA 1214
Query 1198 ATGATCAAATTAAACCCACCGGAACAAGTTTTTCAGCTCAAAGGCTCCGATCACGCACCG 1257
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1215 ATGATCAAATTGAACCCACCGGAACAAGTTTTTCAGCTCAAAGGCTCCGATCACGCACCG 1274
Query 1258 TTCTTCTCTCGGCCTCAATCCTTGAACCGAATCCTCGTCGAGATATCTCAAATACCGTTC 1317
||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||
Sbjct 1275 TTCTTCTCTCGGCCTCAGTCCTTGAACAAAATCCTCGTCGAGATATCTCAAATACCGTTC 1334
Query 1318 AAGAAATCATCCT 1330
|||||||||||||
Sbjct 1335 AAGAAATCATCCT 1347
> AT1G69240.1 | Symbols: ATMES15, MES15, RHS9 | methyl esterase
15 | chr1:26027976-26030234 REVERSE LENGTH=1490
Length=1490
Score = 974 bits (527), Expect = 0.0
Identities = 1014/1237 (82%), Gaps = 82/1237 (7%)
Strand=Plus/Plus
Query 133 CGGACGCTACTTCCTTCGCTCTCCTGCTCTGGATCATCATCCACTACG--T-CGTCCAAG 189
||||| |||| || || ||||| ||||| ||||| | || ||| || | ||||||||
Sbjct 146 CGGACATTACTACCATCTCTCTCTTGCTCCGGATC--C-TCAACTTCGTCTACGTCCAAG 202
Query 190 AAAGGCGGGATCAAAG-CAAAGACGAAGAAGATAAGAG--AG--A-GA-C---ATCATCA 239
||||| |||||| ||| |||| | ||||||||||||| || | | | | || ||
Sbjct 203 AAAGGAGGGATC-AAGACAAA-A--AAGAAGATAAGAGAAAGACACCACCAAGAGCAACA 258
Query 240 TCATCAAGACCACGAAAAAGACTCTCATATAATTCAGGAGCAAACACTAGCAGCCACTAA 299
|||||| || || || |||||||||| | | ||||| || |||||| |||| ||||||||
Sbjct 259 TCATCATGATCATGAGAAAGACTCTC-T-T-ATTCAAGACCAAACATTAGCTGCCACTAA 315
Query 300 TCTCCTCTTCAACCAAACCCCTCGTAGCAGCAACTCTGTTGTTCCTCCTAGTTTCAGACG 359
| | ||||| | ||||| ||||||| ||||||||| || |||||| |||| ||||
Sbjct 316 TATTCTCTTTAGTCAAACGCCTCGTAACAGCAACTC---TGCTCCTCC---TTTCCGACG 369
Query 360 CTCCACCTCCGTTGTCTATCCCTCGGCTCAGCC-ATCG--G--GTA-CCAG-CT-C--AG 409
|||||||||||| || || | ||| || || || | || | ||| || | || | ||
Sbjct 370 CTCCACCTCCGTCGTTTA-CACTCAGC-CA-CCTACCGCCGCTGTAGCC-GCCTCCGTAG 425
Query 410 GACCTGTTTTAGCGG-TCC-AGACTCCTAAGAAGTCAAAC-GCGGGATTCGTAAGAAGCT 466
| ||| ||| ||| || |||||||||||| || || |||| ||| ||||| |
Sbjct 426 GTTCTG-TTT-CCGGCGCCTTGACTCCTAAGAAATC-CACTTATGGATACGTTAGAAGTT 482
Query 467 CTAGCTCTAGACAAAGGTCCAGTACCGATCCCTTGATC--AAGCCTAACCAGC-TCGTTG 523
||||| ||| || || || || || ||| || || || || || || |||| || | |
Sbjct 483 CTAGCAATAGGCAGAGATCAAGCACTGAT-CC-TGTTCTTAAACCCAATCAGCTTC-TAG 539
Query 524 ACAAGGAGCTAAATAAGGTGGAAGGTTCGGAGACGAAGCGGTTCGTGCTGGTTCATGGTG 583
|||||||||| | ||||| |||||| ||||||| ||||||||||||||||||||||| |
Sbjct 540 ACAAGGAGCT--A-AAGGTCGAAGGTGCGGAGACAAAGCGGTTCGTGCTGGTTCATGGAG 596
Query 584 GTGGATTCGGAGCATGGTGTTGGTACAAAACCATAACGCTCTTAGAGAAACATGGTTTCC 643
| || || || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 597 GAGGGTTTGGTGCATGGTGTTGGTACAAAACCATAACGCTCTTAGAGAAACATGGTTTCC 656
Query 644 AAGTCGATGCTGTTGACTTGACCGGTTCAGGTGTGAGCTCTATTGACACCAACAACATCA 703
|||| || || ||||||||||||||||| ||||| |||||| ||||||| ||||||||||
Sbjct 657 AAGTAGACGCCGTTGACTTGACCGGTTCCGGTGTCAGCTCTTTTGACACAAACAACATCA 716
Query 704 CCAGCCTTGCTCACTAC-TCCAAGCCTCTCCTCCACTTCTTTGA-ATCCCTTAAACCCAC 761
| ||||| ||||| ||| || || || |||||||| |||||||| | |||||||||||||
Sbjct 717 CTAGCCTCGCTCAATACGTCAAA-CCACTCCTCCATTTCTTTGACA-CCCTTAAACCCAC 774
Query 762 CGAGAAGGTGATATTGGTGGGGCATGATTTTGGAGGAGCTTGTATGTCTTATGCTATGGA 821
||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct 775 CGAGAAGGTGATATTAGTGGGGCATGATTTTGGAGGAGCTTGTATGTCTTATGCCATGGA 834
Query 822 AATGTTCCCTACTAAGATCGCCAAAGCTGTCTTT-ATCTCTGCTGCTATGTTGGCTAATG 880
|||| |||| |||||||||| || ||| | ||| || ||||||||||||||||||||||
Sbjct 835 GATGTACCCTTCTAAGATCGCTAAGGCTAT-TTTCATATCTGCTGCTATGTTGGCTAATG 893
Query 881 GCCAGAGCACTCTTGATCTCTTTAATCAACAGG-TGGGGTCAAAT---GATCTGATGCAA 936
||| |||||||| ||||||||||| |||||| || |||||| ||||||||| ||
Sbjct 894 CCCAAAGCACTCTCGATCTCTTTAACCAACAGCCTGAC-TCAAATTATGATCTGATGGAA 952
Query 937 CAAG-CACAGATCTTTCTATACGCCAACGGCAAAAAGAATCCTCCAACAGCCGTTGATTT 995
|||| | || | ||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct 953 CAAGTC-CATCTATTTCTGTACGCCAACGGCAAAAAGAACCCTCCAACAGCCGTTGATTT 1011
Query 996 CGACAGATCTTTGCTTAGAGACTTTCTCTTCAATCAAAGCCCTCCAAAGGACCTCGCATT 1055
||||||||| ||||||||||| ||| |||| ||||| ||||||||||||||| | |||||
Sbjct 1012 CGACAGATCATTGCTTAGAGATTTTTTCTTTAATCAGAGCCCTCCAAAGGACGTTGCATT 1071
Query 1056 GGCCTCGGTATCCATTAGACCGATCCCGTTCGCACCGGTCAG-CGAAAAAGTTC-ACTTG 1113
|| |||||||| || ||||| |||||||||||||| || | |||||| | || || ||
Sbjct 1072 AGCGTCGGTATCGATGAGACCAATCCCGTTCGCACCAGTG-GTCGAAAA-GCTCCACGTG 1129
Query 1114 TCGGAGAAAAACTACGGTTCTATCCGACGGTTCTACATCAAAACCATGGAGGAT--T-AC 1170
||||||||||| |||||||| ||||||||||||||||||||||||||||||||| | ||
Sbjct 1130 TCGGAGAAAAATTACGGTTCAATCCGACGGTTCTACATCAAAACCATGGAGGATGATTAC 1189
Query 1171 GCTGTACCGGTT-CTTCTCCAGGAAGCAATGATCAAATTAAACCCACCGGAACAAGTTTT 1229
|||||||||||| || ||||| || ||||||||||||| |||||| || |||||||||||
Sbjct 1190 GCTGTACCGGTTTCT-CTCCAAGATGCAATGATCAAATCAAACCCTCCAGAACAAGTTTT 1248
Query 1230 TCAGCTCAAAGGCTCCGATCACGCACCGTTCTTCTCTCGGCCTCAATCCTTGAACCGAAT 1289
||| ||||||||||| || || ||||| ||||||||||| ||||| || |||||||| ||
Sbjct 1249 TCATCTCAAAGGCTCTGACCATGCACCTTTCTTCTCTCGTCCTCAGTCTTTGAACCGGAT 1308
Query 1290 CCTCGTCGAGATATCTCAAATACCGTTC-AAGAAATC 1325
||||| ||||| |||||| |||| | | ||||||||
Sbjct 1309 ACTCGTTGAGATTTCTCAATTACC-TCCCAAGAAATC 1344
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 65561911770
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5