BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg912460
Length=1704
Score E
Sequences producing significant alignments: (Bits) Value
AT1G25480.1 | Symbols: | Aluminium activated malate transporte... 2656 0.0
AT2G17470.1 | Symbols: | Aluminium activated malate transporte... 1064 0.0
> AT1G25480.1 | Symbols: | Aluminium activated malate transporter
family protein | chr1:8948465-8950876 FORWARD LENGTH=1649
Length=1649
Score = 2656 bits (1438), Expect = 0.0
Identities = 1572/1639 (96%), Gaps = 0/1639 (0%)
Strand=Plus/Plus
Query 1 ATGGCTGACCAAACCAGAGAAGCCCTTCTCTCTGGAAAAGGTTGCTCAGATTTCGGATTC 60
|||||||||||||| ||||||||| |||||||| |||||| |||||||||||||||||||
Sbjct 3 ATGGCTGACCAAACTAGAGAAGCCTTTCTCTCTCGAAAAGCTTGCTCAGATTTCGGATTC 62
Query 61 AATGATTCAAGCATCATCGATGACCGTCGTTCCAAGTTCCGTTGTTTCCGATTTTGCTCC 120
|||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 63 AATGATTCAAACATCATCGATGACCGTCGTTCCAAGTTCCGGTGTTTCCGATTTTGCTCC 122
Query 121 GACGGGATCACCGCTTCCTGGAAAGCGTTATACGACATCGCCGCTAAATTATACGAGATG 180
||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||
Sbjct 123 GACGGGATCACTGCTTCCTGGAAAGCTTTATACGACATCGGTGCTAAATTATACGAGATG 182
Query 181 GGTCGTTCCGATCGTCGGAAAGTTTACTTCTCCGTCAAGATGGGGATGGCTCTCGCACTC 240
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 183 GGTCGTTCCGATCGTCGGAAAGTTTACTTCTCCGTTAAGATGGGGATGGCTCTCGCACTC 242
Query 241 TGTTCTTTCGTCATCTACCTCAAAGAAACACTCCGTGACGCTAGCAAGTACGCCGTTTGG 300
|||||||||||||||||||| |||||| |||||||||||||||||||||| || ||||||
Sbjct 243 TGTTCTTTCGTCATCTACCTTAAAGAACCACTCCGTGACGCTAGCAAGTATGCTGTTTGG 302
Query 301 GCGATCCTTACTGTTGTCGTCGTCTTCGAATATAGTATAGGAGCAACATTGGTCAAAGGA 360
|||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct 303 GCGATCCTTACTGTTGTCGTCGTCTTTGAGTATAGTATAGGAGCAACATTGGTCAAAGGA 362
Query 361 TTCAATAGAGCTGTAGGAACACTCTCTGCTGGAGGACTTGCTCTTGGCATAGCTAGACTC 420
|| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 363 TTTAATAGAGCTATAGGAACACTCTCTGCTGGAGGACTTGCTCTTGGCATAGCTAGACTC 422
Query 421 TCTGTTTCAGCTGGAGAATTCGAAGAACTCATTATCATTATCAGTATTTTCATTGCAGGT 480
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 423 TCTGTTTCAGCTGGAGAATTTGAAGAACTCATTATCATTATCAGTATTTTCATTGCAGGT 482
Query 481 TTTTCTGCAAGTTATTTGAAACTATACCCGGCGATGAAGTCGTATGAATATGCATTCAGG 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 483 TTTTCTGCAAGTTATTTGAAACTATACCCGGCGATGAAGTCGTATGAATATGCATTCAGG 542
Query 541 GTGTTTTTGTTGACATACTGCATTGTTCTTGTGTCTGGAAACAACTCTAGAGAttttttt 600
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 543 GTGTTTTTGTTGACATACTGTATTGTTCTTGTGTCTGGAAACAACTCTAGAGATTTTTTT 602
Query 601 tGCACTGCTTATTATAGGTTTTTGCTTATTCTGGTTGGTGCTGCTATCTCTTTGGGTGTG 660
|||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||
Sbjct 603 AGCACTGCTTATTATAGGTTTTTGCTTATCCTGGTTGGTGCTGGTATCTGTTTGGGTGTG 662
Query 661 AACATATTTATACTTCCCATTTGGGCTGGAGAAGACCTCCATAAACTAGTGGTTAAGAAT 720
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 663 AACATATTTATACTTCCCATTTGGGCTGGAGAAGACCTCCATAAACTAGTTGTTAAGAAT 722
Query 721 TTCAAGAGTGTGGCCAATTCCCTTGAAGGATGTGTTAATGGGTACTTGCAATGTGTTGAA 780
||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 723 TTCAAAAGTGTGGCCAATTCACTTGAAGGATGTGTTAATGGGTACTTGCAATGTGTTGAA 782
Query 781 TACGAGAGGATTCCTTCGAAGATTCTCACTTACCAAGCTTCGGATGATCCATTATACAGT 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 783 TACGAGAGGATTCCTTCGAAGATTCTCACTTACCAAGCTTCGGATGATCCATTATACAGT 842
Query 841 GGATACAGGTCTGTAGTCCAATCTACGAGCCAAGAAGATTCTCTGCTTGATTTTGCAATA 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 843 GGATACAGGTCTGTAGTCCAATCTACGAGCCAAGAAGATTCTCTGCTTGATTTTGCAGTA 902
Query 901 TGGGAGCCTCCACATGGACCATACAAGACTTTCCACCATCCATGGGCAAACTATGTCAAA 960
||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 903 TGGGAGCCTCCACATGGACCATATAAGACTTTCCACCATCCATGGGCAAACTACGTCAAA 962
Query 961 CTTAGTGGTGCGGTAAGGCATTGCGCTTTCATGGTCATGGCAATGCATGGCTGCATTCTT 1020
|||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 963 CTTAGTGGCGCAGTAAGGCACTGCGCTTTCATGGTCATGGCAATGCATGGCTGCATTCTT 1022
Query 1021 TCGGAAATTCAGGCAGCTCCAGAAAAAAGGCAGGCTTTTCGTCAAGAACTTCAGAGAGTT 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1023 TCGGAAATTCAGGCAGCTCCAGAAAAAAGGCAGGCTTTTCGTCAAGAACTTCAAAGAGTT 1082
Query 1081 GGAAATGAAGGAGCCAAAGTCTTGAGATTGTTTGGAGAAAAAGTGGAGAAAATGGAGAAA 1140
||||| |||||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct 1083 GGAAACGAAGGAGCCAAAGTCTTGAGGTTGTTTGGAGAAAAGGTGGAGAAAATGGAGAAG 1142
Query 1141 CTAAGCCCAGGAAACGTTCTCAATGAAGTTCAGCGAGCAGCAGAGGAACTACAGATGAAA 1200
||||||||||| ||||||||||| || ||||| ||||||||||||||||||||||||||
Sbjct 1143 CTAAGCCCAGGGAACGTTCTCAAGGATGTTCAAAGAGCAGCAGAGGAACTACAGATGAAA 1202
Query 1201 ATAGACACTAACTCCTTCCTTCTTGTCAACTCAGAAAGCTGGGCTGCTATGAAAGAGAAA 1260
||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1203 ATAGACAGTAACTCCTTCCTACTTGTCAACTCAGAAAGCTGGGCTGCTATGAAAGAGAAA 1262
Query 1261 GCCGAAGCTGAAGAAGCGCAACAAAACTATCACGAAGAAAAAGACGATGAGTCCAAAGTG 1320
||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||
Sbjct 1263 GCCGAAGCTGAAGAAGCGCAACAAAACTATCACGAAGCCAAAGACGACGAGTCTAAAGTG 1322
Query 1321 ATCCAATCCCTCAGCCAGATGTGGGACAATAACAACAACCATCATCATCAGAATCCACAC 1380
|| ||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||
Sbjct 1323 ATTCAATCCCTCAGCCAGATATGGGACAATAACAACAACCCTCATCATCAGAATCAACAC 1382
Query 1381 ACTGGTAATGATTCTCAGCTATGGATTTCAACAGAGAGTATGATGCTTAGGAACCGCGAA 1440
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1383 GCTGGTAATGATTCTCAGCTATGGATATCAACAGAGAGTATGATGCTTAGGAACCGCGAA 1442
Query 1441 AACTGGCCAAGCGTCTCTTTTATAGGCGGTTCTATGATCAATGAGACAGAATCTAAAGTA 1500
|||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||
Sbjct 1443 AACTGGCCAAGCGTCTCTTTCATAGGCGGTTCTATGATCAATGAGATAGAATCCAAAGTA 1502
Query 1501 CATGAAAGCGCGAGTTCTTTGTCGCTAGCCACATTTGCGTCTCTTTTGATCGAGTTTGTT 1560
||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1503 TATGAAAGTGCGAGTTCTTTGTCGCTAGCTACATTTGCGTCTCTTTTGATCGAGTTTGTT 1562
Query 1561 GCAAGGCTCCAGAATATTGTTAACGCGTTTGAGGAGCTAAGCACTAAAGCTGATTTCAAA 1620
||||||||||| |||||||||||||||| |||||| |||||||||||||| |||||||||
Sbjct 1563 GCAAGGCTCCAAAATATTGTTAACGCGTATGAGGAACTAAGCACTAAAGCCGATTTCAAA 1622
Query 1621 GAACAAGTAAGCGAGACAC 1639
|||||||| ||||||||||
Sbjct 1623 GAACAAGTTAGCGAGACAC 1641
> AT2G17470.1 | Symbols: | Aluminium activated malate transporter
family protein | chr2:7584505-7588008 REVERSE LENGTH=1684
Length=1684
Score = 1064 bits (576), Expect = 0.0
Identities = 1187/1476 (80%), Gaps = 66/1476 (4%)
Strand=Plus/Plus
Query 174 CGAGATGGGTCGTTCCGATCGTCGGAAAG-T-TTACTTCTCCGTCAAGATGGGGATGGCT 231
|||| |||| | ||||||||||| ||| | | || |||| | || |||||||| ||||||
Sbjct 90 CGAGTTGGGACATTCCGATCGTC-GAAGGATCTT-CTTCGCGGTGAAGATGGGAATGGCT 147
Query 232 CTCGCACTCTG-TTCTTTCGTCATCTACCTCAAAGAAACACTCCGTGACGCTAGCAAGTA 290
|| || ||||| | | || || || | ||||||||| | | | ||| ||||| || ||
Sbjct 148 CTTGCCCTCTGCTCCGTT-GTTATTTTCCTCAAAGAGCCGTTGCATGATGCTAGTAAATA 206
Query 291 CGCCGT-TTGGGCGATCCTTACTGTTGTCGTCGTCTTCGAATA-T-AGTATAGGAGCAAC 347
| | || | |||| ||||||||||| ||||| || ||||| || | || | ||||||||
Sbjct 207 CTCTGTATGGGGC-ATCCTTACTGTCGTCGTGGTTTTCGAGTATTCCGT-T-GGAGCAAC 263
Query 348 ATTGGTCAAAGGATTCAATAGAGCTG-TAGGAACACTCTCTGCTGGAGGACTTGCTCTTG 406
||||||||||||||||| ||||| | |||| ||| | ||||||||||| || |||||||
Sbjct 264 TTTGGTCAAAGGATTCAACAGAGC-GATAGGCACAGTATCTGCTGGAGGGCTCGCTCTTG 322
Query 407 GCATAGCTAGACTCTCTGTTTCAGCTGGAGAATTCGAAG--AACTCATTATCATTATCAG 464
|||| || || |||||||||| | | |||| |||| || ||| ||| ||||| | | |
Sbjct 323 GCATCGCGAGGCTCTCTGTTTTATCAAGAGATTTCG-AGCAAAC-CATCATCATAACCTG 380
Query 465 TATTTTCATTGCAGGTTT-TTCTGCAAGTTATTTGAAACTATACCCGGCGATGAAGTCGT 523
|||||| | |||||||| | ||| ||||||| ||||| ||||||| |||||| | |
Sbjct 381 CATTTTCCTAGCAGGTTTCAT-TGCTAGTTATTCAAAACTCCACCCGGCCATGAAGCCAT 439
Query 524 ATGAATATGCATTCAGGGTGTTTTTGTTGACATACTGCATTGTTCTTGTGTCTGGAAACA 583
||||||| |||||||||||||| |||||||||| ||| |||||||| || || || ||||
Sbjct 440 ATGAATACGCATTCAGGGTGTTCTTGTTGACATTCTGTATTGTTCTGGTTTCGGGGAACA 499
Query 584 ACT-CTAGAGAttttttttGCACTGCTTATTATAGGTTTTTGCTTATTCTGGTTGGTGCT 642
| | | |||| || || |||| || ||||| ||||||||| ||||| | ||||||||
Sbjct 500 A-TACCGGAGACTTCTTCAGCACGGCGTATTACAGGTTTTTGTTTATTGTTGTTGGTGCA 558
Query 643 GCTATC-TCTTTGGGTGTGAACATATTTATACTTCCCATTTGGGCTGGAGAAGACCTCCA 701
| | | | ||||| |||||| ||||| ||| |||| || ||||| || || || |||||
Sbjct 559 ACCA-CATGTTTGGTTGTGAATATATTCATATTTCCAATATGGGCCGGGGAGGATCTCCA 617
Query 702 TAAACTAGTGGTTAAGAATTTCAAGAGTGTGGCCAATTCCCTTGAAGGATGTGTTAATGG 761
|||||| |||| || ||||||||||||||||| |||||||| ||||||||||| |||||
Sbjct 618 TAAACTGGTGGCCAATAATTTCAAGAGTGTGGCAAATTCCCTAGAAGGATGTGTAAATGG 677
Query 762 GTACTTGCAATGTGTTGAATACGAGAGGA-TTCCTTCGAAGATTCTCACTTACCAAGCTT 820
|||||||||||||| ||||| |||| || | || |||||||||||||| |||||| | |
Sbjct 678 CTACTTGCAATGTGTGGAATATGAGA-GAGTACCCTCGAAGATTCTCACGTACCAAACAT 736
Query 821 CGGATGATCCATTATACAGTGGATACAGGTCTG-TAGTCCAATCTACGAGCCAAGAAGAT 879
| |||||||||||||||||||| |||||||| | || | |||||||| | || |||||
Sbjct 737 CTGATGATCCATTATACAGTGGGTACAGGTCCGCTA-TTCAATCTACAAATCAGGAAGAA 795
Query 880 TCTCTGCTTGATTTTGCAATATGGGAGCCTCCACATGGACCATACAAG-AC-TTTCCACC 937
|||||||| |||||||| ||||||||||||||||||||||| ||| || || ||| |||
Sbjct 796 TCTCTGCTCGATTTTGCCATATGGGAGCCTCCACATGGACCTTAC-AGAACGTTT-AACC 853
Query 938 ATCCATGGGCAAACTATGTCAAACTTAGTGGTGCGGTAAGGCATTGCGCTTTCATGGTCA 997
|||| ||| |||||||||||||||||||||||| ||||||||||| ||||||| ||||
Sbjct 854 ATCCCTGGAAAAACTATGTCAAACTTAGTGGTGCAGTAAGGCATTGTGCTTTCACCGTCA 913
Query 998 TGGCAATGCATGGCTGCATTCTTTCGGAAATTCAGGCAGCTCCAGAAAAAAGGCAGGCTT 1057
|||| || ||||| ||||| ||||| || || |||||||||||||| ||| | ||||| |
Sbjct 914 TGGCGATACATGGTTGCATACTTTCAGAGATACAGGCAGCTCCAGAGAAACGACAGGCAT 973
Query 1058 TTCGTCAAGAACTTCAGAGAGTTGGAAATGAAGGAGCCAAAG-TCTTGAGATTGTTTGGA 1116
||||||| || ||||| |||||||| |||||||| || |||| || || | ||| |||||
Sbjct 974 TTCGTCATGAGCTTCAAAGAGTTGGCAATGAAGGCGCAAAAGTTC-TGCGTTTGATTGGA 1032
Query 1117 GAAAAAGTGGAGAAAATGGAGAAACTAAGCCCAGGAAACG-TTCTCAATGAAGTTCAGCG 1175
||||||||||||||||||||||| ||| |||| ||| | | |||| ||||| ||||| ||
Sbjct 1033 GAAAAAGTGGAGAAAATGGAGAATCTAGGCCCGGGAGA-GATTCTAAATGACGTTCAACG 1091
Query 1176 AGCAGCAGAGGAACTACAGATGAAAATAGACACTAACTCCTTCCTTCTTGTCAACTCAGA 1235
||||||||||| ||||||||||||||||||| ||| |||| ||||||||| ||||||||
Sbjct 1092 TGCAGCAGAGGAGCTACAGATGAAAATAGACAGTAAATCCTACCTTCTTGTGAACTCAGA 1151
Query 1236 AAGCTGGGCTGCTA-TGAAAGAGAAAGCCGAAGCTGAAGAAGCGCAACAAAACTATCACG 1294
||||||||| |||| | ||||||||||| ||||| | |||| || ||| | |
Sbjct 1152 AAGCTGGGCAGCTACT-AAAGAGAAAGCTGAAGC--A-GAAG---AA------TATGAAG 1198
Query 1295 AAGAAAAAGACGATGAGTCCAAAGTGATCCAATCCCTCAGCCAGATGTGGGACAATAACA 1354
||||| |||| || ||||||||||| ||||| | || ||||| ||||| | ||||
Sbjct 1199 AAGAAGCTCACGA-GA--CCAAAGTGATCAAATCCTTAAGTCAGATTTGGGATACCAACA 1255
Query 1355 ACAACCATCATCA-TCAGAATCCA-CACACTGGTAATGAT---TCTCAGCTATGG-ATTT 1408
| | | || || |||||||||| | | |||||||||| |||||| ||||| | |
Sbjct 1256 GTAGC-AGCAACAATCAGAATCCAGCT-AGTGGTAATGATGAATCTCAGATATGGGAAT- 1312
Query 1409 CAACAGAGAGTATGATGCTTAGGAA-CCGCGAAA-ACTGGCCAAGCGTCTCTTTTATAGG 1466
||||||||||||||||| ||| ||| ||| || | | |||||||| || || || || ||
Sbjct 1313 CAACAGAGAGTATGATG-TTAAGAAACCGTGAGACA-TGGCCAAGTGTGTCCTTCATTGG 1370
Query 1467 CGGTTCTATGATCAATGAGACAGAATCTAAAGTACATGAAAGCGCGAGTTCTTTGTCGCT 1526
|||||| || | |||||||||| || ||||||| | |||||||||||||||||||| |
Sbjct 1371 TGGTTCTGTGGTAAATGAGACAGTATATAAAGTATACGAAAGCGCGAGTTCTTTGTCTTT 1430
Query 1527 AGCCACATTTGCGTCTCTTTTGATCGAGTTTGTTGCAAGGCTCCAGAATATTGTTAACGC 1586
||| || ||||| || ||| | |||||||||||||||||||| |||| |||| |||||
Sbjct 1431 AGCTACGTTTGCTTCCCTTCTCATCGAGTTTGTTGCAAGGCTGGAGAACCTTGTAAACGC 1490
Query 1587 GTTTGAGGAGCTAAGCACTAAAGCTGATTTCAAAGA 1622
||||||||||||||||| ||||| ||||||| |||
Sbjct 1491 TTTTGAGGAGCTAAGCACAAAAGCAGATTTCAGAGA 1526
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 84236514510
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5