BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg912583
Length=7563
Score E
Sequences producing significant alignments: (Bits) Value
AT4G30990.2 | Symbols: | ARM repeat superfamily protein | chr4... 1216 0.0
> AT4G30990.2 | Symbols: | ARM repeat superfamily protein | chr4:15084098-15097920
FORWARD LENGTH=8101
Length=8101
Score = 1216 bits (658), Expect = 0.0
Identities = 1534/1938 (79%), Gaps = 136/1938 (7%)
Strand=Plus/Plus
Query 1351 GAGAGAATTCATGAGTTCTTGGAAG-AGAATATTAAGAAA-ATTCAAAC-GAAGATAGAG 1407
||||||||||||||||||||||||| | || ||||| ||| ||| ||| ||| || |||
Sbjct 1625 GAGAGAATTCATGAGTTCTTGGAAGCA-AAGATTAA-AAAGGTTC-AACAGAATATTGAG 1681
Query 1408 ATTACAGGATTAGCTCAAATTGATGAGGCTGAGTTTGCTGCTGTTTGGGGAGCTGTCAAT 1467
| | | ||||||||||||||| ||||||| ||||| ||||| ||||||||| ||||||
Sbjct 1682 AATGCTGGATTAGCTCAAATTAATGAGGCCGAGTTGGCTGCAATTTGGGGAGTTGTCAAG 1741
Query 1468 TGTT-TCCCCTATTTTAAAGTGGATTCATCATTACTGATTTGCTTTAAGAATACTCTCAG 1526
|||| | || |||||||||||||||||||||||| |||||||||||||||| ||||||||
Sbjct 1742 TGTTAT-CCTTATTTTAAAGTGGATTCATCATTATTGATTTGCTTTAAGAAAACTCTCAG 1800
Query 1527 ACAGCATTTGGCAGCCTCAGTTATAAACACTT-CTAGT-GCTCCAGTATTGATGTGGCAG 1584
|||||||||||||| |||| | || |||||| | ||| || |||| |||||||||||||
Sbjct 1801 ACAGCATTTGGCAGTGTCAGATGTAGACACTTGC-AGTGGC-CCAGAATTGATGTGGCAG 1858
Query 1585 AGCTTACTTGGTGCTGCTTTGGGGTCATGTCT-CAAATTCTGTCCTACTGGAAAACTCAT 1643
|||||||||||| || ||||| |||||||| | |||| || || || || |||
Sbjct 1859 AGCTTACTTGGTACTACTTTGAGGTCATGT-TACAAA--ATG----AC-GG-GAA-TCAA 1908
Query 1644 CCACAGTGATTTAGAGGAAGCTTTGTCTCTTGCTAAATG-TTACAAGTCATGTGCA-CAA 1701
|||||||||| ||||||||||||||||| |||||||| | |||||||||||||| | |||
Sbjct 1909 CCACAGTGATCTAGAGGAAGCTTTGTCTTTTGCTAAA-GATTACAAGTCATGTG-AGCAA 1966
Query 1702 GTGCTGTCTCCTGTGGCCGACT-ATTTGGATTTTGTGTACAGGCCTATAATAGCTAACCA 1760
||| |||| || |||||||| | |||||| ||| || |||||||| | ||||| ||
Sbjct 1967 GTGTTGTCCCCGGTGGCCGA-TGTTTTGGAATTTATGCACAGGCCTGCATTAGCT---CA 2022
Query 1761 TGATAGCTGTAAAG-CATGTCCAGATCTCCAAGCAAATAAAGCTCAAGA-GACGTTTGAC 1818
|| ||| | | ||| | | |||||| || ||||||||||| ||| ||| | | |||||
Sbjct 2023 TGGTAGGTCT-AAGCCTTATCCAGAACTTCAAGCAAATAAGGCTGGAGATG-CTTTTGAA 2080
Query 1819 GTATTTTCTGAAAATTTACGTCACT-CAAACAAAGATGTCCGTCTTCA-GACTATAAGGA 1876
|||||||||||||||| ||||| | | |||||| || |||||||| | |||| | ||||
Sbjct 2081 ATATTTTCTGAAAATTTGCGTCA-TCCGAACAAAAATATCCGTCTT-ATGACTCTGAGGA 2138
Query 1877 TTTTGTGCCATTTTGAAACTTTGTC-TCCGAATCCATCTTTGGAAGAGAATCCTCCAAAG 1935
||||||||||||||||||||||||| || | | || ||||| |||||| |||||||
Sbjct 2139 TTTTGTGCCATTTTGAAACTTTGTCGTCTG-ACCCTTCTTTTGAAGAGCATCCTCC---T 2194
Query 1936 AAGAAACAGAAAACTGAAATGATTCAAAAGTCTTCTCCTAAAAGGAATGTTCTTCAGTTA 1995
||| | || | ||||| |||| || | || ||||||||||||||||
Sbjct 2195 AAG--A-AG---A---AAATG----AAAA-----CT--GAGAA-GAATGTTCTTCAGTTA 2233
Query 1996 TTGCTCACAGTT-GAAAAGTCCCCTCATACAGTATCA-ACTGAAAC-GAAGTTGCTCA-G 2051
|| ||| | || ||| || | ||| ||||| | ||| | | || |||| || |
Sbjct 2234 TTACTCTTA-TTCGAAGAGACTGCTCCCACAGT-GGATACT-AGTCGGATGTTG-GCAGG 2289
Query 2052 TTTGATTACTAGAATACAAGAGGATCTGTCTACTTGCAGGATACATGAGGCATATGT-AC 2110
| ||| ||| ||||||||| | || || || ||||||||||| ||||||||| |
Sbjct 2290 ATACATTTCTACAATACAAGATAACCTCTCCGCTGGCAGGATACATTCGGCATATGTGA- 2348
Query 2111 CGGTGGTATTCAATGGAATGAT-AGGATTATTTCATAGTCGTTATTCTAAAATATGTGTG 2169
| | ||||| ||||| ||| | ||| |||| |||| | |||| || | ||||||
Sbjct 2349 AGCTTGTATTGAATGGGATGTTGGGGA-TATTACATATTAGTTA-TC-GTCCTTTGTGTG 2405
Query 2170 -GC-AGCATCTAAGTGCCTTGCGGTTCTTATGAAGAAGCACACAGCAATG--GTGTGGAA 2225
| ||||||| |||| |||||||||||| ||| ||| | || | || |||||||
Sbjct 2406 TTCAAGCATCTGAGTGTCTTGCGGTTCTTGTGAGGAAATATACTG--GTGCAGTGTGGAG 2463
Query 2226 TGATTTTGTTTGTTATCTGGGTCAGTGCCAACAAAAATTTGTAGCAATACATAATCATCC 2285
|||||||||||||||| |||| |||||||||| |||||||| | | | ||| |||||
Sbjct 2464 TGATTTTGTTTGTTATTTGGGGCAGTGCCAACTAAAATTTGAAACCCTCCATGATCATAG 2523
Query 2286 TGAGTGTG-GAAAGTACAGCATCTCAGAGA---A-G--TAT-A-CT-GATCTG-ATGGAG 2334
|||| || | || | || || ||||||| | | | | | | ||||| ||||
Sbjct 2524 TGAGAATGCG-AACCAAAGTATGTCAGAGAGGCATGCATGTAATTTAAATCTGAATGG-C 2581
Query 2335 CGTTTTTATATATTTCTATATCCACCATCTGATAGCACATCTACTGC-A--G-A----A- 2385
|||||| || | ||||| | ||||||||||| || ||| ||||||| | | | |
Sbjct 2582 CGTTTTAATTTGTTTCTCTTTCCACCATCTGCTATCACGCCTACTGCAACGGTATCTGAT 2641
Query 2386 GTGATATCT-ATGTTGCTCCAGACCTTACAAAAAAG-TCCCACTGTTGCTCAGTCGCGGG 2443
||| ||||| | |||||| |||||||||| |||||| | | | |||||||||||| ||||
Sbjct 2642 GTGGTATCTCA-GTTGCTACAGACCTTAC-AAAAAGCTTCAAGTGTTGCTCAGTCTCGGG 2699
Query 2444 TTTCTGAAATTCTCCCTCTGTTATTAGAATTTCTTGGATACAACAGCGAAAATCCCGAGA 2503
|||||||||||||||| |||| ||| ||||||| |||||||||||||||||||| | ||
Sbjct 2700 CTTCTGAAATTCTCCCTTTGTTGTTAAAATTTCTGGGATACAACAGCGAAAATCCTGGGA 2759
Query 2504 GGGTCGGATTATTTAAGGGCGGAGCTTGTAAAGGAGAGGAGTGGAAG-CCGTTACTTATA 2562
| ||||||| || ||| ||| ||| ||||||||||||||| |||||| | ||| ||| ||
Sbjct 2760 GTGTCGGATCATATAATGGCCGAGTTTGTAAAGGAGAGGACTGGAAGACGGTT-CTTGTA 2818
Query 2563 CAATGGATGATTTTGCTGAAGTTGATGAAGAATACGGGGTCGTCTCGTACTAGTCTATTT 2622
|||||| ||| ||||| || || ||||||||| | |||||| | || ||||| ||||
Sbjct 2819 CAATGGTTGACGTTGCTAAAATTAATGAAGAATCCTAGGTCGTTTTGTTTTAGTCAATTT 2878
Query 2623 GTT-AATGACGTTCTGCAGAATAGGTTCCTTGACGATAATGATGCTAAAATACAAACGAA 2681
|| || ||| ||||||||||||||||||| || |||||||||||| |||| ||||||||
Sbjct 2879 -TTAAACGACATTCTGCAGAATAGGTTCCTGGATGATAATGATGCTGAAATCCAAACGAA 2937
Query 2682 TGTCCTAGAGTGCCTTCTGGAGTG-GAATGA-TGACTTACGCCCACACTGCTTGCATTTA 2739
||| ||||||||||||||| | | |||||| | ||||| ||||||| || ||||||
Sbjct 2938 TGTTCTAGAGTGCCTTCTGTTG-GCGAATGACT-TCTTACTCCCACACCGCCAGCATTTG 2995
Query 2740 TTGAATTTGATTAAACCAGATA-AATTGAGAGAAGAGCTCACAACCTGGAACTTATCC-A 2797
||||||||||| |||||| | | ||||||||||||| ||||||||||||||||| ||| |
Sbjct 2996 TTGAATTTGATCAAACCA-AAAGAATTGAGAGAAGAACTCACAACCTGGAACTTGTCCGA 3054
Query 2798 AAGACATTGAAGAAGCTCGCAGACCTCATCTGGTTTCTCTTGTAATTCGCATTCTTATGC 2857
|| |||| | |||| ||| |||| || || | ||||||||||||||||||| |||||||
Sbjct 3055 AA-ACATCGGAGAACCTCACAGATCTTATATTTTTTCTCTTGTAATTCGCATCCTTATGC 3113
Query 2858 CAAAAGTTAGGA-ATTTAAAGAACTCAGCTTCGCGTAAGCGTACAAGTATTCC-TCACCG 2915
|||||||||||| | ||||| || || ||||| | |||| |||||||| ||| ||||||
Sbjct 3114 CAAAAGTTAGGACA-TTAAAAAATTCGGCTTCAAGGAAGCATACAAGTA-TCCGTCACCG 3171
Query 2916 GAAGGCGA-TTCTTCGCTTTATATCTCAGCTGGATGTTAATGAACTTTCCCTGTTCTTTG 2974
|||||| | ||||| |||||||||||||||||||||||||||||||| | |||||||||
Sbjct 3172 GAAGGC-AGTTCTTTGCTTTATATCTCAGCTGGATGTTAATGAACTTGCGTTGTTCTTTG 3230
Query 2975 CTTTGTTGATTAAGCCTTTGAACATCATACCAGAGGAAGCCATGGACTTGTTTAGTAGTT 3034
| |||||||| || ||||||||||||||| |||||||| | ||||||| ||| | ||||
Sbjct 3231 CATTGTTGATAAAACCTTTGAACATCATATCAGAGGAAACAATGGACTCATTTTGGAGTT 3290
Query 3035 CGGGAAAAAGTTCTGTGGATTGCTTCCAAAAGTTGAATTTCCTGAAATATCTCACTCTTG 3094
| || ||||||||| | || | |||||||| | ||||| ||||||||| ||||| |||
Sbjct 3291 CAGGCAAAAGTTCTCTCGACTATTTCCAAAACTCCAATTTTCTGAAATATTTCACTGTTG 3350
Query 3095 ATACTATATCGACCTTATCCAGGAAGCAGAAATCTGGGTTTCTTTC-TGTCATCCAACAA 3153
||||||| || || |||||||| || ||||||| |||||||||| | ||||||||||||
Sbjct 3351 ATACTATTTCAACGTTATCCAGAAATCAGAAATTTGGGTTTCTT-CATGTCATCCAACAT 3409
Query 3154 ATCTTTGAAGTTTTTCATGAA-TCCCATGTCCGACCATTTT-TAGACTTCCTGATGGGAT 3211
||| ||||||| ||| ||||| | | ||||||||| |||| ||||||| |||||||||
Sbjct 3410 ATCCTTGAAGTCTTTGATGAACTTCG-TGTCCGACC-TTTTCTAGACTTTATGATGGGAT 3467
Query 3212 GCGTTGTCCGGCTATTGG 3229
| ||||||||||||||||
Sbjct 3468 GTGTTGTCCGGCTATTGG 3485
Score = 1090 bits (590), Expect = 0.0
Identities = 1160/1422 (82%), Gaps = 91/1422 (6%)
Strand=Plus/Plus
Query 4204 TCCACAGTACTTTGCCTAGAGGCTTCC-GCTCACTCTGACA-TTATCAAAGAGGTTACAA 4261
||| || ||||||||| ||| || ||| ||||||||||| | || |||||||| | ||
Sbjct 4532 TCCTCAATACTTTGCCGAGAAGC-TCCAGCTCACTCTGA-ATTTGGAAAAGAGGTCA-AA 4588
Query 4262 AA-TCTGATGGAAGCTGGACTGGAGATCGTGTATTGTGGATTAT-AAATAAGTTTATTTT 4319
|| |||||| ||||||||| |||||||||||| |||| ||| | | | || ||||||||
Sbjct 4589 AACGCTGATGTAAGCTGGACAGGAGATCGTGTACTGTGCATTTTGAGA-AATTTTATTTT 4647
Query 4320 GAAACACATTGGAGATACAATAAACAGA---AGAATTTCTAGTGGAAAGG-GGGAGATTC 4375
|||||||||||||||| ||||||||||| | | || || | ||||| | |||||
Sbjct 4648 GAAACACATTGGAGATGCAATAAACAGAGGGGGCA-TTATAAT--AAAGGAATG-GATTC 4703
Query 4376 TTTTGATACGCAAAATGGTG-GCAACACTTCCAGATGCCGGAAATCTTACTGCATTCAGA 4434
||||||||||| | |||||| ||| |||||||||||||| ||||||| |||||||||||
Sbjct 4704 TTTTGATACGCGAGATGGTGACCAA-ACTTCCAGATGCCGCAAATCTTTCTGCATTCAGA 4762
Query 4435 CCTTTATGCTCAGAAGACGATGAA-GTGGATTTCTTTAAAAAC-ATT-TTTAGCATTCAG 4491
||| ||||||| |||||||| ||| || ||||| ||| ||| | ||| || | |||||||
Sbjct 4763 CCTCTATGCTCTGAAGACGA-GAATGTAGATTT-TTTTAAAGCTATTGTTCA-CATTCAG 4819
Query 4492 GCACACCGTAGAGCAAGGGCAGTTAAACGTTTCACAAAG-GTGGTCAAAGATAGCAGTCT 4550
|||||||||||||| |||||| || |||||||| || ||||| ||||||||||||||
Sbjct 4820 GCACACCGTAGAGCTAGGGCAATTTCACGTTTCA-GTAGTGTGGTTAAAGATAGCAGTCT 4878
Query 4551 GCCTGAGGGAGTAGTGAGAAGACTTTTGGTCTCAGtttttttCAACATGTTGCTTGATGT 4610
|||||||||||||||||||| |||||||||||| || |||||||| ||||| || || |
Sbjct 4879 GCCTGAGGGAGTAGTGAGAAAACTTTTGGTCTCGGTCTTTTTCAATATGTTACTCGAAGG 4938
Query 4611 ACAAGATGAAAAAGGGAAAAATGTCC-AAGATGCATGCAAAGAAGCCCTTGCATCTGTAT 4669
|||||||| ||||| || |||||| || ||||||||| |||||||||||||||| |||
Sbjct 4939 ACAAGATGGAAAAGATAATAATGTCAGAA-ATGCATGCACAGAAGCCCTTGCATCTATAT 4997
Query 4670 CTGGTCATATGAGTTGGA-AGTCGTACTACGCCCTATTGAATCGGTGTTTCC-ATGAGAT 4727
||| |||||||||||||| | |||||||| || || ||||||||||||||| | |||||
Sbjct 4998 CTGCTCATATGAGTTGGACA-TCGTACTATGCTTTACTGAATCGGTGTTTCCGA-GAGAT 5055
Query 4728 GAA-AGAGCATACCAAAAAGAG-AAAAATTCTGCTGC-AGCTTAG-TGGCTTGATTTTAA 4783
||| | |||| |||||||| || |||||||||||||| | |||| || |||||||||
Sbjct 5056 GAACA-AGCACACCAAAAA-AGGAAAAATTCTGCTGCGA-CTTATCTG-CTTGATTTTGG 5111
Query 4784 ATAACTTCCATTTCTT-AAAAGATGGTTACACACATGAGGCTGCGGAGATTAGGAGTTGC 4842
|||| || ||||| | ||||||||| ||| |||||||||||| ||| ||||||| ||||
Sbjct 5112 ATAAATTTCATTT-TGCAAAAGATGGCTACCCACATGAGGCTGAGGAAATTAGGACTTGC 5170
Query 4843 GTTGAGAAGAGCCTTTTTCCGAAGATACAGATGCTGAT---T---GATTCTGACAGTGTT 4896
|| |||| | | || |||| ||| |||| |||||| | |||||||| | ||||
Sbjct 5171 CTTCAGAAAATTGTGTTCCCGAGGATGCAGAAGCTGATGAATTCTGATTCTGATAATGTT 5230
Query 4897 AATGTTGACAGCTAC-GTGGCTGCAG-TGAAGGTTCTAAACCTTCTGCCCA-AAGAAATA 4953
|||||| |||| || |||||||| | | ||||||||||| || || ||| |||| ||
Sbjct 5231 AATGTTAACAG-TAGTGTGGCTGC-GCTTAAGGTTCTAAAGCTACT-CCCTGAAGATGTA 5287
Query 4954 AGGGACCCGCAGCTAGGC-TCTATAGTTC-CTAAAATTTGC-AGTTATTTGAAGGATGGG 5010
|||| | | ||| | |||||||||| | |||||| || |||| ||| ||| | ||
Sbjct 5288 TTGGACTCAAACCTAT-CATCTATAGTTCAC-AAAATT-GCCAGTTTTTTAAAGAACCGG 5344
Query 5011 TTG-ACGAGCACACGTGATGTAGCAAGAAAGGCTCTGGCTGCTTGTGTGGAGGAACTCGG 5069
||| | |||||||||||||| ||| ||| |||||||| ||||||| || | ||||| ||
Sbjct 5345 TTGGA-GAGCACACGTGATGAAGCCAGATTGGCTCTGGTTGCTTGTTTGAAAGAACTTGG 5403
Query 5070 GCTAGAGTACCTGCAATTTGTTGTAAAAGATTT-ACGTGCTATATTAAAACGAGGATCTG 5128
||| |||||| ||||| |||| || || |||| ||||||||| ||||||||||||||||
Sbjct 5404 GCTGGAGTACTTGCAAGTTGTAGTCAAC-ATTTTACGTGCTATCTTAAAACGAGGATCTG 5462
Query 5129 AGGTGCATGTGCTAGGATACACTGTCAACTT-TATCTTATCAAAGTGCTTGTCCAATCCT 5187
||||||||||||| || |||||| |||| || ||||||||||||||||||||||||||||
Sbjct 5463 AGGTGCATGTGCTGGGGTACACTCTCAA-TTCTATCTTATCAAAGTGCTTGTCCAATCCT 5521
Query 5188 AATCCTACGTGTGGGAAGTTGGATCATTGTTTGGGAGATCTCCTTGCAGTGGTGGAAACC 5247
| | | ||||||||||| ||||||||||||| ||||||||||| ||||||||||||
Sbjct 5522 A--C--A--TGTGGGAAGTTAGATCATTGTTTGGTTGATCTCCTTGCTGTGGTGGAAACC 5575
Query 5248 GATATCCTTGAAGACGTTTATGAACAGAAAGAGGAGTTGAAAACC--GCGTTCAAGAAGA 5305
|||||||||| ||| ||| |||||||||||||| | ||||| || | ||| ||
Sbjct 5576 GATATCCTTGGAGAGGTTGCTGAACAGAAAGAGGTG--GAAAAATTTGCATCCAA-AAT- 5631
Query 5306 AGAAAGAAACA-GTAAAACGCAAGTCACCTGAGACTCTGAAAATCATTGCTGAAAATATA 5364
|||||||||| | |||||| |||||| ||||||||||||| | |||||||||||| ||
Sbjct 5632 -GAAAGAAACAAG-AAAACGGAAGTCATTTGAGACTCTGAAATTGATTGCTGAAAATGTA 5689
Query 5365 ACGTTCAGAAGTAATGTG-TTGAAGTTACTTTCTCCGGTCACAGCTCAGCTGCAGAGGCC 5423
||||||||||| ||| | || |||||||||||||||||||| |||||||||||| |||
Sbjct 5690 ACGTTCAGAAGCCATG-GATTAAAGTTACTTTCTCCGGTCACTGCTCAGCTGCAGCGGCA 5748
Query 5424 TTTGACTCCAAAGTT-AATATCAAAACTAAAGGAGATGTTAAGATGTATTGCAGCTGGTA 5482
| | ||||||||| | || | |||| || || ||||||||| | |||||||||||||
Sbjct 5749 TCTAACTCCAAAGATCAAAA-CAAATCTGGAGAAGATGTTAAAACAAATTGCAGCTGGTA 5807
Query 5483 TTGAAGGCAATCCATCTGTTGATCAAAGAGATCTTTTT-TGTTTTATATATGAACGT-GT 5540
||||||||||| |||||||||| ||| ||||||||||| | ||||||||||| | | ||
Sbjct 5808 TTGAAGGCAATACATCTGTTGACCAAGGAGATCTTTTTCT-TTTTATATATGGCC-TAGT 5865
Query 5541 TG-TGGATGGTATTAACAACAGGAATGGTCTTGGAGATGAAG 5581
|| || |||||||||| ||||||| ||||||||||||| |||
Sbjct 5866 TGATG-ATGGTATTAATAACAGGAGTGGTCTTGGAGATCAAG 5906
Score = 972 bits (526), Expect = 0.0
Identities = 803/937 (86%), Gaps = 18/937 (2%)
Strand=Plus/Plus
Query 3228 GGCTGGCACTTCTTTGAAGCAATTTAAAGAGTTGAGATCCTTATGTCTGAAGATTATTGC 3287
|||||||||| |||| ||||| ||||||||||||||||||||||||||||| || |||||
Sbjct 3604 GGCTGGCACTGCTTTTAAGCAGTTTAAAGAGTTGAGATCCTTATGTCTGAAAATCATTGC 3663
Query 3288 TTATGTTCTTAACAAGTACGAGGATTGCAATCTTGGCTCTGAGTTCTGGGACCTCTTCTT 3347
| |||||||| | || ||||||||||| |||||||||| ||||||||||||||||||||
Sbjct 3664 TCATGTTCTTGATAAATACGAGGATTGTGATCTTGGCTCCGAGTTCTGGGACCTCTTCTT 3723
Query 3348 TTCAGCAGTGAATCCGTTAATTAAGAGTTTTAAGCAGGAAGGCTCTAGTAGTGAGAGACC 3407
|||||| |||| |||||||||||||||||| |||||||| || ||||||||||||| |||
Sbjct 3724 TTCAGCTGTGAGTCCGTTAATTAAGAGTTTCAAGCAGGAGGGTTCTAGTAGTGAGAAACC 3783
Query 3408 AAGCTCATTGTTCAAATGCTTCTTTTCAATGAGTAAAAGCTGCAATCTCGTG-ACCTTCT 3466
||| || |||||| ||||||||| ||||||||||||||| | ||||||||| | | |||
Sbjct 3784 AAGTTCCTTGTTCTCATGCTTCTTGTCAATGAGTAAAAGCCGTAATCTCGTGAATC-TCT 3842
Query 3467 TATGTCGGGAGGAGTTTCTTATTCCAGACATTTTTTCAATTCTAACAGTCACTACAGCTT 3526
|||||||||| |||| ||| ||||||||||||||||||||||||| ||||| || ||||
Sbjct 3843 TATGTCGGGAAGAGTCCCTTGTTCCAGACATTTTTTCAATTCTAACTGTCACCACGGCTT 3902
Query 3527 CAAAAGATATAAAGTCTTATGCCTTGAAGTTCATCGAGAATCTGCTCAGGCTTGACAATG 3586
|| ||| ||||||||||| ||||||||||||||| ||||||||||| | ||||||||||
Sbjct 3903 CAGAAGCTATAAAGTCTTCTGCCTTGAAGTTCATTGAGAATCTGCTTTGTCTTGACAATG 3962
Query 3587 AGTTGGCTGAGGATGAGCATATGATCAAAGGGTTCTTAGATCCATATATAGAGGCACTGA 3646
||||| ||||||||| |||||||| || ||| ||||||| |||||||| |||||||
Sbjct 3963 TGTTGGGTGAGGATGAAAATATGATCCGTGGATTCGTAGATCCGTATATAGAAGCACTGA 4022
Query 3647 CTAACAGCTTGCATTCTCTCTTTC-TTGGGGATATTTTGAAAAGGAAATCAGTCAAGTAT 3705
|||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||
Sbjct 4023 TTAACAGCTTGCATTCTCT-TTTCATTGGGGATATTTTGAAAAGGAAATCAGTCAAGTAT 4081
Query 3706 CAT-GGAAATAGAGAGATTATGATTCTCAAACTATTGTCGAAGCACATACGAGATGGGTC 3764
||| || || |||||||||| ||||| ||| ||||||| |||| || | |||| | ||
Sbjct 4082 CATGGGGAA-AGAGAGATTAAAATTCTTAAATTATTGTCAAAGCGTATGCAAGATCGCTC 4140
Query 3765 TCATGTTACAAAGTATTTGGATGTCTTGCTGTCTTTCTTGGATAAAAGTGTGAAAGATTC 3824
||||||| |||||||||||||||||||||||||||||| |||||||||| |||||| |
Sbjct 4141 CCATGTTATGAAGTATTTGGATGTCTTGCTGTCTTTCTTGAATAAAAGTGTTAAAGATCC 4200
Query 3825 TGATATTCATCGT-AAGGCTTTGCTAGCCATTCAGGACATC-TCATTGAACCTTGGGACT 3882
|||||| | |||| ||| ||||||||||||||||||||||| | | | | ||||||| |
Sbjct 4201 TGATATCCGTCGTGAAG-CTTTGCTAGCCATTCAGGACATCAT-AGCGTATCTTGGGA-T 4257
Query 3883 G-AGAGTACCAGCA-GAATTGTTAAGAGACTGTCTCCTCTGCTTATTGATGCTGAAAATG 3940
| |||||||||||| || || | || | | | |||||||| ||| ||||||||||| ||
Sbjct 4258 GGAGAGTACCAGCAAGA-TTATAAATACAGTCTCTCCTCTACTTGTTGATGCTGAACTTG 4316
Query 3941 AAGTTAGATTATGCATTTGTAATCTTCTTGAATCTCTTGCAAAAGTTGATCCGT-CTCTG 3999
| |||||||||||||||||| |||||||||| |||||||||||| | || | | | |||
Sbjct 4317 ATGTTAGATTATGCATTTGTGATCTTCTTGAGTCTCTTGCAAAAATCGA-CTTTTCACTG 4375
Query 4000 GTTCATGTGGCAAATTGTGTCCGTGATATGAATGCCAACTCACCCATGGAAGTTGATGGC 4059
| | |||||||||| ||||||| ||||||||||||| |||| | ||||||||||||| |
Sbjct 4376 GATGATGTGGCAAAGCGTGTCCGCGATATGAATGCCATCTCAGCTATGGAAGTTGATGAC 4435
Query 4060 CTTGACTATGAAAAGATAATTGATGCTTATG-GGACGATTGACGCAGATTTCTTTAAAAA 4118
|||||||||||||||||| || |||| |||| ||| |||| | ||||||||||||| ||
Sbjct 4436 CTTGACTATGAAAAGATAGTTAATGCCTATGTGGA-GATTAATGCAGATTTCTTTATTAA 4494
Query 4119 ATCCTCGGAGCAGCACGTGATGCTCATACTCTCACAG 4155
|||||| |||||||| |||| | ||||||||||||
Sbjct 4495 ATCCTCAGAGCAGCATACGATGATTATACTCTCACAG 4531
Score = 86.1 bits (46), Expect = 5e-15
Identities = 59/65 (91%), Gaps = 1/65 (2%)
Strand=Plus/Plus
Query 5626 AAGTCATGTCCACATCTTATAACCGTGTTTGCTCTGGACTTATTGCACAACAGACTGAAA 5685
|||||||||||||||||||||||||||||||||||||||||||| | ||| || |||||
Sbjct 5981 AAGTCATGTCCACATCTTATAACCGTGTTTGCTCTGGACTTATTTTATAACCGAATGAAA 6040
Query 5686 CAAAT 5690
||||
Sbjct 6041 -AAAT 6044
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 377754724435
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5