BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg912754 Length=573 Score E Sequences producing significant alignments: (Bits) Value AT1G29420.1 | Symbols: | SAUR-like auxin-responsive protein fa... 398 4e-110 AT1G29510.1 | Symbols: SAUR68 | SAUR-like auxin-responsive prot... 398 4e-110 AT1G29450.1 | Symbols: | SAUR-like auxin-responsive protein fa... 361 5e-99 AT1G29490.1 | Symbols: | SAUR-like auxin-responsive protein fa... 350 1e-95 AT1G29430.1 | Symbols: | SAUR-like auxin-responsive protein fa... 333 1e-90 AT1G29500.1 | Symbols: | SAUR-like auxin-responsive protein fa... 331 4e-90 AT1G29460.1 | Symbols: | SAUR-like auxin-responsive protein fa... 294 5e-79 > AT1G29420.1 | Symbols: | SAUR-like auxin-responsive protein family | chr1:10301152-10301951 REVERSE LENGTH=800 Length=800 Score = 398 bits (215), Expect = 4e-110 Identities = 329/383 (86%), Gaps = 11/383 (3%) Strand=Plus/Plus Query 177 AAGATGGCCAAGAAATGGCAACAAAGAGCAGCCTTCAGCATGGAAAAGAATCTCACTTCA 236 ||||||||||||||||||||||| ||||| ||||| || | ||||||||||||| |||| Sbjct 68 AAGATGGCCAAGAAATGGCAACAGAGAGCTGCCTTAAG-AAGGAAAAGAATCTCTTTTCA 126 Query 237 GACG-TCAAGTGCTACTACTAGCAGCTCAACCACTGTAGAGAAGCGTTGTTTCGTGGTTT 295 | | |||| || ||||||||||||||||||| ||| ||||||| | ||||| ||||||| Sbjct 127 TA-GATCAACTGATACTACTAGCAGCTCAACCGCTGCAGAGAAGGGCTGTTTTGTGGTTT 185 Query 296 ACACGGCAGATA-AAGCACGTTTTG-TTTTCCCAAAAAGCTACCTGAGCAACTCTGTTTT 353 |||| | |||| || | || |||| |||| |||| ||| || ||||||||||||||| | Sbjct 186 ACACATCCGATAGAATC-CGCTTTGCTTTT-CCAATAAGTTATCTGAGCAACTCTGTTAT 243 Query 354 CCAAGAGGTCTTGAAGATATCTGAAGAAGAGTTTGGCCTCTCCAGC-GATGGAGCAATCA 412 ||||||| ||||||||||||| ||||||||||||||| || ||| | || ||| |||||| Sbjct 244 CCAAGAGCTCTTGAAGATATCCGAAGAAGAGTTTGGCATCCCCA-CGGAAGGACCAATCA 302 Query 413 CATTGACATTCGATTCGGTTTTCTTGGAGTATCTCATCAAATTGATCCAACGACGAATGG 472 ||||| ||||||||||||||||||||||||||||||||| |||| ||||| ||||||||| Sbjct 303 CATTGCCATTCGATTCGGTTTTCTTGGAGTATCTCATCAGATTGGTCCAAAGACGAATGG 362 Query 473 AGGGAGATACAGAAAAGGCTCTGT-TAATGTCAATCTCTAGTGCTAGATGTTCTAAACCA 531 | ||||| |||||||||||||| | ||| ||||||||||||| ||||||||||| |||| Sbjct 363 ATGGAGACACAGAAAAGGCTCT-TATAACGTCAATCTCTAGTACTAGATGTTCTTTACCA 421 Query 532 TATTCTTTTCAACAACAAGAACA 554 | |||||||||| |||||||| Sbjct 422 TGCTCTTTTCAACTTCAAGAACA 444 > AT1G29510.1 | Symbols: SAUR68 | SAUR-like auxin-responsive protein family | chr1:10322574-10323189 FORWARD LENGTH=616 Length=616 Score = 398 bits (215), Expect = 4e-110 Identities = 331/385 (86%), Gaps = 15/385 (4%) Strand=Plus/Plus Query 177 AAGATGGCCAAGAAATGGCAACAAAGAGCAG-CCTTCAGCATGGAAAAGAATCTCACTTC 235 |||||||| |||||||||||||||||||||| ||| || || |||||||||||||| ||| Sbjct 137 AAGATGGCTAAGAAATGGCAACAAAGAGCAGCCCTCCA-CA-GGAAAAGAATCTCATTTC 194 Query 236 AGACG-TCAAGTG-CTACTACTAGCAGCTCAACCACTGTAGAGAAGCGTTGTTTCGTGGT 293 ||| | |||| || || |||||||||||| | |||||||| ||| ||||||||||||| Sbjct 195 AGA-GATCAAATGTCT-TTACTAGCAGCTCTTCTACTGTAGAAAAGGGTTGTTTCGTGGT 252 Query 294 TTACACGGCAGAT-AAAGCACGTTTTG-TTTTCCCAAAAAGCTACCTGAGCAACTCTGTT 351 |||||||| ||| ||| | || |||| |||| |||| ||| || |||||||||||| || Sbjct 253 CTACACGGCGGATAAAATC-CGCTTTGCTTTT-CCAATAAGTTATCTGAGCAACTCTATT 310 Query 352 TTCCAAGAGGTCTTGAAGATATCTGAAGAAGAGTTTGGCCTCTCCAGC-GATGGAGCAAT 410 |||||||| ||||||| ||||||||||||||||| || ||| ||| | || ||| |||| Sbjct 311 GTCCAAGAGCTCTTGAAAATATCTGAAGAAGAGTTCGGTCTC-CCAACGGAAGGACCAAT 369 Query 411 CACATTGACATTCGATTCGGTTTTCTTGGAGTATCTCATCAAATTGATCCAACGACGAAT 470 ||||||| | ||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct 370 CACATTGCCGTTCGATTCGGTTTTCTTGGAGTATCTCATCAAACTGATCCAAAGACGAAT 429 Query 471 GGAGGGAGATACAGAAAAGGCTCTGTTAATGTCAATCTCTAGTGCTA-GATGTTCTAAAC 529 ||| ||||||||||||||||||||||| ||||||||||||||||||| | |||||| || Sbjct 430 GGATGGAGATACAGAAAAGGCTCTGTTGATGTCAATCTCTAGTGCTAAG-TGTTCTTTAC 488 Query 530 CATATTCTTTTCAACAACAAGAACA 554 || |||||| | ||| |||||||| Sbjct 489 AATGTTCTTTGCTACAGCAAGAACA 513 > AT1G29450.1 | Symbols: | SAUR-like auxin-responsive protein family | chr1:10305951-10306499 REVERSE LENGTH=549 Length=549 Score = 361 bits (195), Expect = 5e-99 Identities = 325/385 (84%), Gaps = 20/385 (5%) Strand=Plus/Plus Query 177 AAGATGGCCAAGAAATGGCAACAAAGAGCAG-CCTTCAGCATGGAAAAGAATCTCACTTC 235 |||||||||||||| |||||||||||||||| ||| || || ||||||| |||||| ||| Sbjct 118 AAGATGGCCAAGAAGTGGCAACAAAGAGCAGCCCTCCA-CA-GGAAAAGGATCTCATTTC 175 Query 236 AGACG-TCAAGT-GCTACTACTAGCAGCTCAACCACTGTAGAGAAGCGTTGTTTCGTGGT 293 | | | |||||| | | ||||| ||||||||| ||| ||||||| ||||||| ||||| Sbjct 176 A-AAGATCAAGTAG-TGCTACT---AGCTCAACCGCTGCAGAGAAGGGTTGTTTTGTGGT 230 Query 294 TTACACGGCAGATA-AAGCACGTTTTG-TTTTCCCAAAAAGCTACCTGAGCAACTCTGTT 351 ||||||| |||| | | |||| |||| |||| || ||| |||||||| ||||||||| Sbjct 231 TTACACGACAGACAGCA-CACGCTTTGCTTTT-CCGCTAAGTTACCTGAGTAACTCTGTT 288 Query 352 TTCCAAGAGGTCTTGAAGATATCTGAAGAAGAGTTTGGCCTCTCCAGC-GATGGAGCAAT 410 |||||||| |||||||||| ||||||||||||||||||||| ||| | | |||| | || Sbjct 289 TTCCAAGAACTCTTGAAGATCTCTGAAGAAGAGTTTGGCCTC-CCAACTGGTGGACCTAT 347 Query 411 CACATTGACATTCGATTCGGTTTTCTTGGAGTATCTCATCAAATTGATCCAACGACGAAT 470 ||||| | |||||||||| ||||||||||||||||||||||||||| ||||| ||||||| Sbjct 348 CACATCGCCATTCGATTCAGTTTTCTTGGAGTATCTCATCAAATTGGTCCAAAGACGAAT 407 Query 471 GGAGGGAGATACAGAAAAGGCTCTGTTAATGTCAATCTCTAGTGCTAGATGTTCTAAACC 530 ||| | ||| |||||||||||| |||||||||||||||||||||||||||||||| || Sbjct 408 GGATGCAGACACAGAAAAGGCTTTGTTAATGTCAATCTCTAGTGCTAGATGTTCTTC-CC 466 Query 531 ATATTCT-TTTCAA-CAACAAGAAC 553 | || || ||| || | |||||||| Sbjct 467 A-ATGCTCTTTGAAACTACAAGAAC 490 > AT1G29490.1 | Symbols: | SAUR-like auxin-responsive protein family | chr1:10319744-10320402 FORWARD LENGTH=659 Length=659 Score = 350 bits (189), Expect = 1e-95 Identities = 307/361 (85%), Gaps = 20/361 (6%) Strand=Plus/Plus Query 177 AAGATGGCCAAGAAATGGCAACAAAGAGCAGCCTTCAGCATGGAAAAGAATCTCACTT-C 235 ||||||||||||||||||||||| ||||||||||| || | |||||||||||||| || | Sbjct 116 AAGATGGCCAAGAAATGGCAACAGAGAGCAGCCTTAAGGA-GGAAAAGAATCTCA-TTCC 173 Query 236 AGACG-TCAAGTGCTACTACTAGCAGCTCAACCACTGTAGAGAAGCGTTGTTTCGTGGTT 294 ||| | |||| | |||||||||| |||||| || | ||||||||| | ||||| |||||| Sbjct 174 AGA-GATCAAATTCTACTACTAGTAGCTCATCCGCGGTAGAGAAGGGCTGTTTTGTGGTT 232 Query 295 TACACGGCAGATAAAGCACGTTTTG-TTTTCCCAAAAAGCTACCTGAGCAACTCTGTT-T 352 ||||| || ||| ||| ||| |||| |||| || | ||| |||||||| ||||||||| | Sbjct 233 TACACTGCGGATCAAGTACGCTTTGCTTTT-CCGATAAGTTACCTGAGTAACTCTGTTAT 291 Query 353 TCCAAGAGGTCTTGAAGATATCTGAAGAAGAGTTTGG-CCTCTCCAGC-GATGGAGCAAT 410 | |||||| |||||||||||||||||||||||||||| || ||| | || ||| |||| Sbjct 292 T-CAAGAGCTCTTGAAGATATCTGAAGAAGAGTTTGGTATTC-CCA-CAGAAGGACCAAT 348 Query 411 CACATTG--A--C-ATTCGATTCGGTTTTCTTGGAGTATCTCATCAAATTGATCCAACGA 465 ||| ||| | | |||||||||| ||||||||||||||||||||||||||||| || || Sbjct 349 CACGTTGCCATTCGATTCGATTCGATTTTCTTGGAGTATCTCATCAAATTGATCAAAAGA 408 Query 466 CGAATGGAGGGAGATACAGAAAAGGCTCTGT-TAATGTCAATCTCTAGTGCTAGATGTTC 524 |||||||| |||||||||||||| ||||| | ||| | |||||||||||||||||||||| Sbjct 409 CGAATGGATGGAGATACAGAAAACGCTCT-TATAACGGCAATCTCTAGTGCTAGATGTTC 467 Query 525 T 525 | Sbjct 468 T 468 > AT1G29430.1 | Symbols: | SAUR-like auxin-responsive protein family | chr1:10302650-10303335 REVERSE LENGTH=686 Length=686 Score = 333 bits (180), Expect = 1e-90 Identities = 299/353 (85%), Gaps = 21/353 (6%) Strand=Plus/Plus Query 177 AAGATGGCCAAGAAATGGCAACAAAGAGCAGCCTTC-AGCATGGAAAAGAATCTCACTTC 235 ||| ||||||||||||||||||||||||||||| || || | | |||||||| ||| ||| Sbjct 137 AAGTTGGCCAAGAAATGGCAACAAAGAGCAGCCCTCAAG-A-GAAAAAGAATTTCATTTC 194 Query 236 AGACG-TCAAGTGCTACTACTAGCAGCTCAACCA-CTGTAGAGAAGCGTTGTTTCGTGGT 293 ||| | |||||| ||||||||||||| ||| || ||||||| ||| ||||||||||||| Sbjct 195 AGA-GATCAAGTATTACTACTAGCAGC-CAAACAGCTGTAGAAAAGGGTTGTTTCGTGGT 252 Query 294 TTACACGGCAGATAA-AGCACGTTTTGT--TTTCCCAAAAAGCTACCTGAGCAACTCTGT 350 ||||||||| ||||| | | |||||| | |||||| || | ||||| |||||| || | Sbjct 253 TTACACGGCTGATAAGATC-CGTTTT-TCATTTCCCTTAA-GTTACCTAAGCAACACTAT 309 Query 351 TTTCCAAGAGGTCTTGAAGATATCTGAAGAAGAGTTTGGCCTCTCC-AGCG-ATGGAGCA 408 | |||||||| ||||||| ||||||||||||||||| || ||| || | || | ||| || Sbjct 310 TGTCCAAGAGCTCTTGAAAATATCTGAAGAAGAGTTCGGTCTC-CCGA-CGGAAGGACCA 367 Query 409 ATCACATTGACATTCGATTCGGT-TTTCTTGGAGTATCTCATCAAAT-TGATCCAACGAC 466 ||||||||| |||||||||||| ||| || |||||||||||||| | |||||||| ||| Sbjct 368 ATCACATTGCCATTCGATTCGGCCTTT-TTAGAGTATCTCATCAA-TCTGATCCAAAGAC 425 Query 467 GAATGGAGGGAGATACAGAAAAGGCTCTGTTAATGTCAATCTCTAGTGCTAGA 519 ||||||| | |||||||||||||||||||||| |||||||||| ||||||||| Sbjct 426 GAATGGATGAAGATACAGAAAAGGCTCTGTTATTGTCAATCTCAAGTGCTAGA 478 > AT1G29500.1 | Symbols: | SAUR-like auxin-responsive protein family | chr1:10321210-10321864 FORWARD LENGTH=655 Length=655 Score = 331 bits (179), Expect = 4e-90 Identities = 304/359 (85%), Gaps = 30/359 (8%) Strand=Plus/Plus Query 177 AAGATGGCCAAGAAATGGCAACAAAGAGCAGC-CTTCAGCATGGAAAAGAATCTCACTT- 234 |||||| || |||||||||||| |||||||| || || || |||||||||||||| || Sbjct 105 AAGATGTTCAGGAAATGGCAACAGAGAGCAGCTCTCCA-CA-GGAAAAGAATCTCA-TTC 161 Query 235 C--AGACGTCAAGTGCTACTACTAGCAGCTCAACCACTGTAGAGAAGCGTTG-TTTCGTG 291 | |||| ||| | ||| | | |||||||||||||||||||| | || ||| || Sbjct 162 CAAAGAC--CAA--G-TAC--C---C-GCTCAACCACTGTAGAGAAGGGATGCTTT-GTC 209 Query 292 GTTTACACGGCAGATAA-AGCACGTTTTG-TTTTCCCAAAAAGCTACCTGAGCAACTCTG 349 ||||||||||| || || | |||| |||| |||| || | ||||||||| |||||||||| Sbjct 210 GTTTACACGGCGGACAACA-CACGCTTTGCTTTT-CCGATAAGCTACCTAAGCAACTCTG 267 Query 350 T-TTTCCAAGAGGTCTTGAAGATATCTGAAGAAGAGTTTGGCCTCTCC-AGCGATGGAGC 407 | ||| |||||| | ||| |||||||||||||||||||||||||| || | || |||| | Sbjct 268 TATTT-CAAGAGATTTTGGAGATATCTGAAGAAGAGTTTGGCCTC-CCAACCGGTGGACC 325 Query 408 AATCACATTGA-CATTCGATTCGGTTTTCTTGGAGTATCTCATCAAATTGATCCAACGAC 466 ||||||||| | |||||||||||||||| |||||||||||||||||||||||| || ||| Sbjct 326 AATCACATT-ACCATTCGATTCGGTTTTTTTGGAGTATCTCATCAAATTGATCAAAAGAC 384 Query 467 GAATGGAGGGAGATACAGAAAAGGCTCTGTTAATGTCAATCTCTAGTGCTAGATGTTCT 525 ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 385 GAATGGATGGAGATACAGAAAAGGCTTTGTTAATGTCAATCTCTAGTGCTAGATGTTCT 443 > AT1G29460.1 | Symbols: | SAUR-like auxin-responsive protein family | chr1:10307507-10308143 REVERSE LENGTH=637 Length=637 Score = 294 bits (159), Expect = 5e-79 Identities = 242/282 (86%), Gaps = 6/282 (2%) Strand=Plus/Plus Query 248 CTACTACTAGCAGCTCAACCACTGTAGAGAAGCGTTGTTTCGTGGTTTACACGGCAGAT- 306 ||||||||||||||||||| |||| |||||| | ||||||||||||||||||| ||| Sbjct 204 CTACTACTAGCAGCTCAACTGCTGTGGAGAAGGGCTGTTTCGTGGTTTACACGGTTGATA 263 Query 307 AAAGCACGTTTTG-TTTTCCCAAAAAGCTACCTGAGCAACTCTGTTTTCCAAGAGGTCTT 365 ||| | || |||| |||| || ||| ||| ||| ||||||||||||| ||||| |||| Sbjct 264 AAATC-CGCTTTGCTTTT-CCGTTAAGTTACTTGAACAACTCTGTTTTCGAAGAGCTCTT 321 Query 366 GAAGATATCTGAAGAAGAGTTTGGCCTCTCCAGC-GATGGAGCAATCACATTGACATTCG 424 ||||||||||||||||||||| |||||| || | |||| ||||||| ||| | |||| Sbjct 322 GAAGATATCTGAAGAAGAGTTCGGCCTC-AGGGCGGGTGGACCAATCACGTTGCCGTTCG 380 Query 425 ATTCGGTTTTCTTGGAGTATCTCATCAAATTGATCCAACGACGAATGGAGGGAGATACAG 484 | ||||||||||||||||||||||||||||| ||| ||||| ||||||| |||||||||| Sbjct 381 ACTCGGTTTTCTTGGAGTATCTCATCAAATTTATCGAACGAAGAATGGATGGAGATACAG 440 Query 485 AAAAGGCTCTGTTAATGTCAATCTCTAGTGCTAGATGTTCTA 526 |||| ||||| |||||||||||||||||||||||||| |||| Sbjct 441 AAAAAGCTCTTTTAATGTCAATCTCTAGTGCTAGATGCTCTA 482 Score = 73.1 bits (39), Expect = 3e-12 Identities = 51/56 (91%), Gaps = 3/56 (5%) Strand=Plus/Plus Query 177 AAGATGGCCAAGAAATGGCAACAAAGAGCAGCCTTCA-GCATGGAAAAGAATCTCA 231 ||||||||||||||||||||||||||||| ||| ||| | | |||||||||||||| Sbjct 113 AAGATGGCCAAGAAATGGCAACAAAGAGCTGCCCTCAAG-A-GGAAAAGAATCTCA 166 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 27528312556 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5