BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg913068
Length=2625
Score E
Sequences producing significant alignments: (Bits) Value
AT1G32530.1 | Symbols: | RING/U-box superfamily protein | chr1... 2885 0.0
AT2G35330.1 | Symbols: | RING/U-box superfamily protein | chr2... 1131 0.0
AT1G32520.1 | Symbols: | unknown protein; FUNCTIONS IN: molecu... 828 0.0
> AT1G32530.1 | Symbols: | RING/U-box superfamily protein | chr1:11759459-11762607
REVERSE LENGTH=2424
Length=2424
Score = 2885 bits (1562), Expect = 0.0
Identities = 1948/2127 (92%), Gaps = 56/2127 (3%)
Strand=Plus/Plus
Query 1 ATGGGTTGTACTGTGAGGGAGAAGCATGTAAAACCGAACCGGAGGATCCGAA-CCGCTGC 59
|||||||||||||||||||||||||| || ||||||| ||| ||||| | || |||||||
Sbjct 82 ATGGGTTGTACTGTGAGGGAGAAGCACGTGAAACCGACCCGTAGGAT-CAAAGCCGCTGC 140
Query 60 TTTTAGATCCGACCCACCGTTATGTTTCATCGAGAAGATTGCTCTATCGCAATCAATTGT 119
||||||||||||||||||||||||| |||||||||||||| | || |||||||||||
Sbjct 141 ATTTAGATCCGACCCACCGTTATGTTGGGTCGAGAAGATTGCTATGTCACAATCAATTGT 200
Query 120 TGAGTCAAGTCTCAAAAACTTGGTTTATCATCCAGGTGTTACTGATTCTGGTTCTGTCAA 179
|||| || | ||| ||||||||||| ||| |||||||||| |||||||||||
Sbjct 201 TGAG--AA----C-----CTT-GTTTATCATCCTGGTCTTACTGATTCCGGTTCTGTCAA 248
Query 180 TTCGAATTCTGGTAATGAGAAT-TTGGAGGAGAATCTTTGGGGTTATTGTACAGAGGAGC 238
|| |||||| | || ||||||| | ||||||||| |||||| ||||||||||||||||
Sbjct 249 TTTGAATTCCGTTACTGAGAATCCT-GAGGAGAATTTTTGGGCATATTGTACAGAGGAGC 307
Query 239 ATTTGGAAGAGATTTTGCTGAAACATTTGGAGTTTTTGTATAATCAAGCTGTTTCGAAGC 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 308 ATTTGGAAGAGATTTTGCTGAAACATTTGGAGTTTTTGTATAATCAAGCTGTTTCTAAGC 367
Query 299 TTCTCGAATTGGGTTATGAGGAACGTGTCGCGATT-AAAGCGGTTTTGAGTAATGGACAC 357
|||| |||||||| |||||||||||||| ||| || ||||||||||||||||||||||||
Sbjct 368 TTCTTGAATTGGGCTATGAGGAACGTGTTGCG-TTGAAAGCGGTTTTGAGTAATGGACAC 426
Query 358 TGTTATGGTGAATTGGATGTTTTGACAAATATAGTGAATAATTCATTATCTTATTTGAAT 417
|||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct 427 TGTTATGGTGAATTGGATGTGTTGACTAATATAGTGAATAATTCATTATCTTATTTGAAT 486
Query 418 AGCAGTAGCGGTGGAGGTGGATGTGGCGGTGGTAGTAATAACGGGAACGGTGAGGATC-A 476
||| |||||||||||| ||||| |||||| |||||||||||||||| |
Sbjct 487 ---AGT---GGTGGAGGTGGA------GGTGGGAGTAAT---GGGAACGGTGAGGATCGA 531
Query 477 TTCGGAGACTGGTTTTACGGATTTGAGAGATTTGGAGGAGTATTCGCTTGCGGGTATGAT 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 532 -ACGGAGACTGGTTTTACGGATTTGAGAGATTTGGAGGAGTATTCGCTTGCGGGTATGAT 590
Query 537 TTACTTGTTGCAACAAGTTAAGCCTAATTTGAGTAAAGGTGATGCAATGTGGTGTTTGTT 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 591 TTACTTGTTGCAACAAGTTAAGCCTAATTTGAGTAAAGGTGATGCAATGTGGTGTTTGTT 650
Query 597 AATGAGTGAGCTACATGTTGGTAGGGCAAGTACTATGGATGTCCCTACGAATAGGTCTA- 655
|||||||||||| ||||||||||||||||||||| |||||||||| |||||||||||||
Sbjct 651 AATGAGTGAGCTCCATGTTGGTAGGGCAAGTACTCTGGATGTCCCAACGAATAGGTCTAG 710
Query 656 --GTTGTACTAAGGAAGATAGCAATGTAGAAGATGTTGGTA---GTGGTACACTAGATAT 710
||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct 711 TTGTTGTACTAAGGAAGATAGCAATGTAGAAGATGTTGGTACGGGTGGTACTCTAGATAT 770
Query 711 TGCTGGTTTTATGGCACCAGCATTGTGTCGATTCCATGGAGGTTGGGATTTTGGGAATGG 770
||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||
Sbjct 771 TGCTGGTTTTATGGCACCAGCGTTGTGTCGATTCCATGGAGGTTGGGGTTTTGGGAATGG 830
Query 771 GGTAGGACCTGAGTTTTCTGGTAACGGGTTTTCTATGAACGGTGCTGAGTTAAAACTGCA 830
|| ||||||||||||||||||||| |||||||||||||| ||||||||||| || ||||
Sbjct 831 GGGAGGACCTGAGTTTTCTGGTAATGGGTTTTCTATGAAAGGTGCTGAGTTGAAGTTGCA 890
Query 831 GAGAGAGATTGATTGTCCGAAGAGATTTAATCTTTCGCCATCCATGAAATCCTTGTTGAA 890
|||||||||||||||||| || || ||||||||||||||||||||||| |||||||||||
Sbjct 891 GAGAGAGATTGATTGTCCTAAAAGGTTTAATCTTTCGCCATCCATGAAGTCCTTGTTGAA 950
Query 891 TCGAAATGTTGCAGCGGTTGCTGCTGGGTATCGTGCTAGTATGAAGCAGAAG-----A-A 944
|| |||||||||||| ||||||||||||||||||||||||||||||||||| | |
Sbjct 951 GCGGAATGTTGCAGCGTTTGCTGCTGGGTATCGTGCTAGTATGAAGCAGAAGCAAATACA 1010
Query 945 ---GTCTGAAACTAGTGGTGATAGCTTATCTTGTAATGATCCTGCACGTGTGGAG-GCTT 1000
|||||| |||| |||||||||| | ||||||||||||||||| |||| || | ||
Sbjct 1011 GTCGTCTGATACTATTGGTGATAGCAAAGCTTGTAATGATCCTGCAATTGTGAAGAG-TT 1069
Query 1001 GTGAGCAGCAGCCACGTAAGTCAGGGAGTGAAGAAAGTGTTAGTTCGGTGTTGGAGAAAT 1060
||| |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1070 GTGGGCAGCAACCACGTAAGTCAGGGAGTGAAGAAAGTGTTAGTACGGTGTTGGAGAAAT 1129
Query 1061 TTCGTGATCTGAACCTTGATGATAATTTGGAATCGGTGGGTGAGGATGATAAGGATTGTG 1120
|||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||
Sbjct 1130 TTCGTGATCTGAACCTTGATGATAATCTGGAATCGGTGGGTGTGGATGATAAGGATTGTG 1189
Query 1121 TGATCGTCAATCTGCTTCATCAGGTTAAGGATCTCGAGAAGAAACTAAAGGAAAGGAAAG 1180
|||| ||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct 1190 TGATAGTCGATCTGCTTCATCAGGTTAAGGATTTCGAGAAGAAAGTAAAGGAAAGGAAAG 1249
Query 1181 ACTGGGCTCAGAAGAAGGCAATGCAAGCTGCTCAAAAGGTCAGCGAGGAATTGGCCGAGC 1240
| |||||||||||||| ||||||||||| || |||||||||||||||||||| || ||||
Sbjct 1250 AGTGGGCTCAGAAGAACGCAATGCAAGCCGCACAAAAGGTCAGCGAGGAATTAGCTGAGC 1309
Query 1241 TTAAATCATTGAGTAGTGAAAGAGAAGGAATCCAACTGCTGAAAAAGGGGAAACAAGCTG 1300
||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1310 TTAAAACATTGAGTAGTGAAAGAGAAGGAATCCAACTGCTGAAAAAGGGGAAACAGGCTG 1369
Query 1301 TTGAAGAATCAACTGTGAAAAGA-TTATCTGACAAAGAAAATGAACTTAGAAAAGCTAGT 1359
||||||||||||||| ||||||| ||| ||||||| |||| |||||| ||||||||| |
Sbjct 1370 TTGAAGAATCAACTGCGAAAAGATTTA-CTGACAAGGAAATTGAACTCAGAAAAGCTTGC 1428
Query 1360 GGTCAAAACGACAGGGCCAATGCGATTGTAAGAAAGCTTGAGAATCAAAATGCAGAAATT 1419
||||||| ||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 1429 AGTCAAAATGACAGGGCCAATGTAATTGTAAGAAAGCTTGAGAATCAAAATGCAGAGATT 1488
Query 1420 CGAGCAGAGCGAGAGGGATCCAAATTAAGTGCATCAGAATCGCTTAAAGCGTGCATGGAA 1479
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1489 CGAGCAGAGCGGGAGGGATCCAAATTAAGTGCATCAGAATCGCTTAAAGCGTGCATGGAA 1548
Query 1480 GCATCAAAGAAGGAGaaaaaaaT-CTTGAAGAAGCTTGTGGCATGGGAGAAACAGAAATT 1538
||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 1549 GCATCAAAGAAGGAG-AAAAAATGCTTGAAGAAGCTTGTGGCATGGGAGAAACAGATATT 1607
Query 1539 GAAGTTGCAGGATGATATCACAGCTGAAAAAGAAAATATTAAGGCCCTTTATAGGACTTT 1598
||||||||||||||| || ||||||||||||||||| ||||||||||| |||| ||||||
Sbjct 1608 GAAGTTGCAGGATGAGATTACAGCTGAAAAAGAAAAGATTAAGGCCCTATATAAGACTTT 1667
Query 1599 AGCTCAGATCACACAGGATGAAAAGGAAATTGAGGCGAAATGGAGACAAGAGCAGAAAGC 1658
|||||| |||||| || |||||||||| ||||||||||||||||| ||||||||||| ||
Sbjct 1668 AGCTCAAATCACAGAGTATGAAAAGGAGATTGAGGCGAAATGGAGGCAAGAGCAGAAGGC 1727
Query 1659 AAAGGAGGACGCTCTGGCTCAAATGGAGGAAGAACAACGCTCAAAAGAAGCAGCTGAGGG 1718
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1728 AAAAGAGGAGGCTCTGGCTCAAATGGAGGAAGAACAACGCTCAAAAGAAGCAGCTGAGGG 1787
Query 1719 TCATAACAAGAGAAAGCTGGAGACTCTACGGTTAAAAATCGAACTAGACTTCCAAAGACA 1778
||| |||||||||||||| |||||| |||| | ||||| ||||||||||||||||||||
Sbjct 1788 TCACAACAAGAGAAAGCTTGAGACTTTACGACTCAAAATTGAACTAGACTTCCAAAGACA 1847
Query 1779 CAAAGACGATCACCAAAGACTAGAGCAAGAACTCTCTCGACTCAAAGCCTCTTCAGATAC 1838
||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||
Sbjct 1848 CAAAGACGATCACCAAAGACTGGAGCAAGAACTCGGTCGACTCAAAGCCTCTTCAGATAG 1907
Query 1839 CGACCCAAGCCACTTATCCAACAACGCTTGGAAACCCGAGAAATCTCAAGGAGAAAACAT 1898
||| |||||||| ||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct 1908 TGACTCAAGCCACATATCCAACAACGCTTGGAAACCCAAAAAATCTCAAGGAGAAAACAT 1967
Query 1899 TGCTAAACTGCTTGAAGAACTTGATAAGCTTGAAGGGTCATATGACAATGAAGCAAACTA 1958
|||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct 1968 TGCTAAGCTGCTTGAAGAAATTGATAAGCTTGAAGGGTCTTATGACAATGAAGCAAACTA 2027
Query 1959 CGATCGAGAATGCATAATCTGTATGAAAGATGAAGTCTCAGTGGTGTTTCTTCCTTGTGC 2018
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 2028 TGATCGAGAATGCATAATCTGTATGAAAGATGAAGTCTCTGTGGTGTTTCTTCCTTGTGC 2087
Query 2019 GCATCAAGTTGTGTGTGGTAGTTGCAGTGATAGCTTCTTCGCGAGCAACAATGGCGGAAG 2078
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2088 GCATCAAGTTGTGTGTGGTAGTTGCAGTGATAGCTTCTTCGCGAGCAACAACGGCGGAAG 2147
Query 2079 CAAAGTCACTTGTCCTTGTTGCCGAGG 2105
|||||||||||||||||||||||||||
Sbjct 2148 CAAAGTCACTTGTCCTTGTTGCCGAGG 2174
> AT2G35330.1 | Symbols: | RING/U-box superfamily protein | chr2:14868989-14871940
FORWARD LENGTH=2674
Length=2674
Score = 1131 bits (612), Expect = 0.0
Identities = 1665/2146 (78%), Gaps = 182/2146 (8%)
Strand=Plus/Plus
Query 1 ATGGGTTGTACTGTGAGGGAGAAGCATGTAAAACCGAACCGGAGGATCC-GAACCGCTGC 59
||||||||||||||||||||||||||||| | ||| ||||||| || || || ||| ||
Sbjct 272 ATGGGTTGTACTGTGAGGGAGAAGCATGTTAGACCAAACCGGAAGA-CCAGATCCG-TG- 328
Query 60 TTTTAGATCCG-A-CCCA-CCGT-TATGTTT-CATCGAGAAGATTGCTCTATCGCAATCA 114
| | ||| | | | |||| | ||||| | |||| | || ||||||||| ||||
Sbjct 329 ----AAACCCGAATTCGATCCGTGT-TGTTTGC-TCGACAGGACGGCTCTATCGAAATCG 382
Query 115 ATTGTTGAGTCAAGTCTCAA-AAACTTGGTTTATCATCCAGGTGTTACT-GATTCTGGTT 172
|||||||| || ||||| || | ||| ||||||||||| ||| || || ||||| |
Sbjct 383 ATTGTTGAATCGAGTCTTAAGCATCTT-GTTTATCATCCGGGTCTT-CTCGATTC--G-- 436
Query 173 CTGT-CA-ATTCGAATTCTGGTAATGAG-AATTTGGAGGAGAAT-CT--TTGGGGTTATT 226
||| || | || || | || || | | ||| ||||| ||| | |||||||||||
Sbjct 437 -TGTCCAGAGTC-AA-AC-CCTAGTG-GCAGTTTTGAGGATAATAATGGTTGGGGTTATT 491
Query 227 GTACAGAGGAGCATTTGGAAGAGATTTTGCTGAAACATTTGGAGTTTTTGTATAATCAAG 286
|||| |||||||| || || || |||||| ||||||||||||||| ||| || ||| |||
Sbjct 492 GTACGGAGGAGCAATTAGAGGATATTTTGTTGAAACATTTGGAGTATTTATACAATGAAG 551
Query 287 CTG-TTTCGAAGCTTCTCGAATT-GGGTTATGAGGAACG-TGTCGCGATT-AAAGCGGTT 342
| | ||||||||||| | | || |||||||| | | | ||| ||| || | ||| |||
Sbjct 552 C-GATTTCGAAGCTTGT-GGGTTCTGGTTATGATG-AGGATGTGGCG-TTGAGAGCTGTT 607
Query 343 -TTGAGTAATGGACACTGTTATGGT-GAATTGGATGTTTTGACAAATATAGTGAATAATT 400
|| |||||||| | ||||||||| ||| |||||||| |||| ||||| | ||||||
Sbjct 608 CTT-AGTAATGGGTATTGTTATGGTGGAA-TGGATGTTATGACTAATATTCTTCATAATT 665
Query 401 CATTATCTTAT-TTGAATAGCAGTAGCGGTGGAGGTGGATGTGGCGGTGGTAGTAATAAC 459
| || ||||| || | || |||| | | | ||| | |||||||||
Sbjct 666 CGTTGGCTTATCTT--A-AG-AGTA-------A--T--A-CTGGTGAAGGTAGTAAT--- 706
Query 460 GGGAACGGTGAGGATCATTCGGAGACTGG-TTTTACGGATTTGAGAGATTTGGAGGAGTA 518
| |||| ||||||||| || ||||| || |||||||||||||||| | |||||||||||
Sbjct 707 GTGAACAATGAGGATCAATCAGAGAC-GGTTTTTACGGATTTGAGACAGTTGGAGGAGTA 765
Query 519 TTCGCTTGCGGGTATGATTTACTTGTTGCAACAAGTTAAGCCTAATTTGAGTAAAGGTGA 578
||| |||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||
Sbjct 766 TTCACTTGCGGGTATGGTTTATTTGTTGCAACAAGTTAAACCTAATTTGAGTAAAGGTGA 825
Query 579 TGCAATGTGGTGTTTGTTAATGAGTGAGCTACATGTTGGTAGGGCAAGTACTATGGATGT 638
|||||||||||||||| ||||||||||||| |||||||| ||||| |||||||||||| |
Sbjct 826 TGCAATGTGGTGTTTGCTAATGAGTGAGCTTCATGTTGGGAGGGCGAGTACTATGGATAT 885
Query 639 CCCTACGAATAGGTCTAGTTGTACTAA--GGA-AGATAGCAATGTAGAAGAT-GT--TGG 692
| || || ||| | | | || ||| || ||| ||||||| | | || ||
Sbjct 886 -AC--CG---AGTTCT-G--G-A-AAAGGGGATAG-TAGTAATGTAGGGGTTGGTGGTGC 933
Query 693 TAGTGGTACACTAGAT---ATTGCTGGTTTTATGGCACCAGCATTGTGTCGATTCCATGG 749
|||| |||| || || ||| |||| ||| || || ||||||||| ||||||||||
Sbjct 934 TAGTAGTACTGTAAATGGGGTTGGTGGTGCTATTGCTCCGGCATTGTGTAGATTCCATGG 993
Query 750 AGGTTGGGATTTTGGGAATGGGGTAGGACCTGAGTTTTCTGGTAACGGGTTTTCTATGAA 809
|||||||| |||||| |||||| |||||| ||||||||||||| ||||||||| || |
Sbjct 994 AGGTTGGGGTTTTGGTAATGGGAAAGGACCCAAGTTTTCTGGTAATGGGTTTTCTTTGCA 1053
Query 810 CGGTGCTGAGTTAAAACTGCAGAGAGAGATTGATTGTCCGAA-GAGATTTAATCTTTCGC 868
| ||| ||||||| |||||||||||||||||||||| || |||||||||||| || |
Sbjct 1054 CAGTGAAGAGTTAACGTTGCAGAGAGAGATTGATTGTCC-AAGGAGATTTAATCTCTCAC 1112
Query 869 CATCCATGAAATCCTTGTTGAATCGA-AATGTTGCAGCGGTTGCTGCTGGGTATCGTGCT 927
| || ||||| || |||||| | || ||||||||||| ||||||||||||||||||||
Sbjct 1113 CTTCGATGAAGTCTTTGTTG-AGAGAGAATGTTGCAGCCTTTGCTGCTGGGTATCGTGCT 1171
Query 928 AGTAT---------GAAGCA---G--AA-GAAGTCTGAAACTAGTGGTGA-TAGCTTATC 971
||||| |||||| | || | ||||||||||||||||| | |||||| ||
Sbjct 1172 AGTATGGAGCAAAAGAAGCAGGTGCAAATGCAGTCTGAAACTAGTGGT-ACTAGCTTGTC 1230
Query 972 TTGTA---ATGATCCTGCACGTGT-GGAGGCTTGTGAGCAG-CAGCCACGTAAGTCAGGG 1026
||| | || | || ||| | | ||| ||||||||| || || || || ||
Sbjct 1231 TTGCACGGCTGCTGCTACACAT-TCAGAGAAGTGTGAGCAGCCA--CATGT-CTTC-GGA 1285
Query 1027 AGTGAAGAAAGTGTT-AGTTCGGTGTTGGAGAAATTTCGTGATCTGAACCTTGATGATAA 1085
||||||||| || || ||||| ||| |||||||||| || ||||||||||||||||| ||
Sbjct 1286 AGTGAAGAATGT-TTCAGTTCAGTGCTGGAGAAATTCCGGGATCTGAACCTTGATGACAA 1344
Query 1086 T-TTGGAATCGGTGGGTGAGGATGAT-AAGGAT--TG-TGTGATCGTCAATCTGCTTCAT 1140
| || || |||| |||||| | | |||||| || | | || | | || |||||
Sbjct 1345 TGTT-GATTCGGCACCTGAGGA-GCTGAAGGATGATGCTTTAATAG--GA-CTACTTCAG 1399
Query 1141 CAGGTTAAGGATCTCGAGAAGAAACTAAAGGAAAGGAAAGACTGGGCTCAGAAGAAGGCA 1200
|||||| |||||||| | ||| || | ||||| |||||||||||||||||||||||||||
Sbjct 1400 CAGGTTCAGGATCTCAAAAAGCAATTGAAGGAGAGGAAAGACTGGGCTCAGAAGAAGGCA 1459
Query 1201 ATGCAAGCTGCTCAAAAGGTCAGCGAGGAATTGGCCGAGCTTAAATCATTGAGTAGTGAA 1260
||||||||||| |||||||||||||| ||| || ||||||||||||| ||||| |||||
Sbjct 1460 ATGCAAGCTGCCCAAAAGGTCAGCGATGAACTGTCCGAGCTTAAATCGTTGAGGAGTGAG 1519
Query 1261 AGAGAAGGAA-TCCAACTGCTGAAAAAGGGGAAACAAGCT-GTTGAAGAATCAAC-TGTG 1317
||||| |||| | || | | ||||||||||||||||| || || || || ||||| | ||
Sbjct 1520 AGAGA-GGAAATTCAGCGGGTGAAAAAGGGGAAACAAACTCGT-GAGGACTCAACCT-TG 1576
Query 1318 AAAAGATTATCTGACAAAGAAAATGAACTTAGAAAAGCTAGTGGTCAAAACGACAGGGCC 1377
|||| |||||| || | ||||||| |||||||||||||| |||||| |||| |||
Sbjct 1577 AAAAAATTATCAGAGATGGAAAATGCTCTTAGAAAAGCTAGCGGTCAAGTTGACAAGGCA 1636
Query 1378 AATGCGATTGTAAGAA-AGCTTGAGAATCAAAA-TGCAGAAATTCGAGCAGAGC-GAGAG 1434
|||||| | ||||| | |||||||| | ||| ||||||||| || || || | ||
Sbjct 1637 AATGCGGTAGTAAGGGCA-CTTGAGAA-CGAAAGTGCAGAAATCCGGGCGGAAATG-GAA 1693
Query 1435 GGATCCAAATTAAGTGCATCAGAATCGCTTAAAGCGTGCATGGAAGCATCAAAGAAGGAG 1494
| |||||||||||||||||||||||||| | || |||||||| || || ||||| |||
Sbjct 1694 GCTTCCAAATTAAGTGCATCAGAATCGCTCACGGCATGCATGGAGGCCTCGAAGAAAGAG 1753
Query 1495 aaaaaaaT-CTTGAAGAAGCTTGTGGCATGGGAGAAACAGAAATTGAAGTTGCAGGATGA 1553
|||||| | ||| ||||| || |||| |||||||| |||||| ||||||||||||| ||
Sbjct 1754 AAAAAA-TGCTTAAAGAAACTACTGGCGTGGGAGAAGCAGAAAATGAAGTTGCAGGACGA 1812
Query 1554 TATCACAGCTGAAAAAGAAAATATTAAGGCCCTTTATAG-GACTTTAGCTCAGATCACAC 1612
|| |||||||| ||||| || |||||||| || |||| | |||||||||||||||| |
Sbjct 1813 GATTACAGCTGAGAAAGAGAAGATTAAGGCACTCAATAGAG-CTTTAGCTCAGATCACTC 1871
Query 1613 AGGATGAAAAGGAA-ATTGAGGCGAAATGGAGACAAGAGCAGAAAGCAAAGGAGGACGCT 1671
|||| ||||| ||| || |||||||||||||| || ||||||||||| |||||| | | |
Sbjct 1872 AGGAAGAAAAAGAATAT-GAGGCGAAATGGAGGCAGGAGCAGAAAGCTAAGGAGCAAGTT 1930
Query 1672 CTGGCTCAAATGGAGGAAGAACAACGCTCAAAAGAAGCAGCTGAGGGTCAT-AACAAGAG 1730
|||||||| |||| |||||||| ||||| || |||||| ||||| | | ||||||||
Sbjct 1931 TTGGCTCAAGTGGAAGAAGAACAGCGCTCGAAGGAAGCAATTGAGGCT-AGCAACAAGAG 1989
Query 1731 AAAGCTGGAGA-CTCTACGGTTAAAAATCGAACTAGACTTCCAAAGACACAAAGACGATC 1789
|||| |||| | | || |||||||| |||||| |||||||||| ||||||||||| ||||
Sbjct 1990 AAAGGTGGAAAGC-CTGCGGTTAAAGATCGAAATAGACTTCCAGAGACACAAAGATGATC 2048
Query 1790 ACCAAAGACTAGAGCAAGAACTCTCTCGACTCAA-A--GCCTCTTCAGA-T-AC-CGA-C 1842
||||||||| || ||||| || ||||| ||||| | ||||||||| | | || | | |
Sbjct 2049 TCCAAAGACTGGAACAAGAGCTGTCTCGGCTCAACAAAGCCTCTTCA-ACTGACTCAAGC 2107
Query 1843 C-C-AAGCCACTTA----TC-CA-ACAACGCTTGGAAACCCGAGAAATCTCAAGG-AGAA 1893
| | || ||| | | || || |||| | | | ||| | || || || |||| ||||
Sbjct 2108 CTCCAATCCAATAACACCTCTCACACAAAGGT-G-AAATCAGACAAGTCG-AAGGGAGAA 2164
Query 1894 AACATTG-CTAAACTGCTTGAAGAACTTGA-TAAGCTTGAAGGGTCATATGACAATGAAG 1951
| || || |||| ||||||||||| || || || |||||| || |||||||| || ||||
Sbjct 2165 A-CAATGTCTAAGCTGCTTGAAGAGCT-GAATAGGCTTGATGGATCATATGAGAAGGAAG 2222
Query 1952 CAAACTACGATCGAGAATG-CATAATCTGTATGAAAGATGAAGTCTCAGTGGTGTTTCTT 2010
||||||| || || ||||| | | ||||| ||||||||||| || || || ||||||||
Sbjct 2223 CAAACTATGACCGGGAATGTC-TGATCTGCATGAAAGATGAGGTTTCGGTTGTGTTTCTC 2281
Query 2011 CCTTGTGCGCATCAAGTTGTGTGTG-GTAGTTGCAGTGATAGCTTC 2055
|||||||| || ||||| || |||| | || ||||| |||||||||
Sbjct 2282 CCTTGTGCTCACCAAGTGGTCTGTGCG-AGCTGCAGCGATAGCTTC 2326
> AT1G32520.1 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; Has 143 Blast hits
to 142 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa
- 39; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes
- 48 (source: NCBI BLink). | chr1:11758211-11759280 REVERSE
LENGTH=939
Length=939
Score = 828 bits (448), Expect = 0.0
Identities = 498/523 (95%), Gaps = 0/523 (0%)
Strand=Plus/Plus
Query 2103 AGGAAGAGAATTAAAATGTTGCTACAAGGCAAGCATTGATGGGTTTAGTGCAACAAAGTT 2162
||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 206 AGGAAGAGAGTTAAAATGTTGCTACAAGGCAAGCATTGATGGGTTTGGTGCAACAAAGTT 265
Query 2163 CCATGAGCGTTGTGATTTCAAAGGTCCATGTGTTATCATAGCTTACACCAAAGAGAAGTC 2222
||| ||||||||||| |||||||||||||||||||||||||||||||| ||||| |||||
Sbjct 266 CCACGAGCGTTGTGACTTCAAAGGTCCATGTGTTATCATAGCTTACACTAAAGACAAGTC 325
Query 2223 TTTCAAGTTTGGTGGATTTAGTCCAGAAGGCTATAGAAGTACTGATGATTATTACGATAC 2282
|||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct 326 TTTCAAGTTTGGTGGATTTAGTCCGGAAGGATATAGAAGTACTGATGATTATTACGATAC 385
Query 2283 ATTTGATGCTTTCCTCTTCTATTGGCTCGACGATTGCGATGACCCAATCGTCCTTTCTAA 2342
|||||||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||
Sbjct 386 ATTTGATGCTTTCCTCTTCTATTGGCTCGAGGATTGTGATGACCCAATCGTCCTTCCTAA 445
Query 2343 GGTTGGAGGAAGTGGAGCGGCTCTTTTTGATTATGCACGTGGAGGGCCTCAATTTGGAGC 2402
|||||||||||||||||| || || ||||||||||| || ||||||||||||||||||||
Sbjct 446 GGTTGGAGGAAGTGGAGCAGCACTATTTGATTATGCTCGCGGAGGGCCTCAATTTGGAGC 505
Query 2403 TGATGGGCTTCTTATCGGACCGCCTTTAGCTCCTGTGATGGGTGGATTTGCGGGTCCGGA 2462
||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct 506 TGACGGGCTTCTTATCGGACCGCCTTTAGCTCCCGTGATGGGCGGATTTGCGGGTCCGGA 565
Query 2463 TACGAACTCGGGGATTGGTGATTTGAGGATGGCTAAATCAAGATTGGGTTTGTCATATGC 2522
|||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||
Sbjct 566 TACGAACTCGGGGATTGGTGATTTGAGGGTGGCTAAATCAAGATTGGGATTGTCATATGC 625
Query 2523 TAAGAGGAAAGATGGGAAAGAATCTATCTTTGGAGATGAAAATAAGGTTAGTCTTGATGA 2582
||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 626 TAAGAGGAAAGATGGAAAAGAATCTATATTTGGAGATGAAAATAAGGTTAGTCTTGATGA 685
Query 2583 TGTATTGGTCTTTTGTAGCCCTTATATTGCTTCTTTGTATTAA 2625
|||||||||||||||||| |||||||||||||| |||||||||
Sbjct 686 TGTATTGGTCTTTTGTAGTCCTTATATTGCTTCCTTGTATTAA 728
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 130333717914
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5