BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg913196 Length=1272 Score E Sequences producing significant alignments: (Bits) Value AT1G33790.2 | Symbols: | jacalin lectin family protein | chr1:... 850 0.0 AT5G28520.1 | Symbols: | Mannose-binding lectin superfamily pr... 364 9e-100 > AT1G33790.2 | Symbols: | jacalin lectin family protein | chr1:12256664-12260605 FORWARD LENGTH=2536 Length=2536 Score = 850 bits (460), Expect = 0.0 Identities = 583/644 (91%), Gaps = 2/644 (0%) Strand=Plus/Plus Query 17 AAGCAAAAGGCGTAAAAGGAGGCAATCAGTGGGATGATTTAGCTGACCATGATCATGTAA 76 |||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1057 AAGCAAAAGGTGGAAACGGAGGCAATCAGTGGGATGATTTAGCTGACCATGATCATGTAA 1116 Query 77 CAAAGATATATGTACAAGATGGTC-GCAAAGGTATTCAGTACGTCAAGTTTGATTATGTC 135 ||||||| |||||||||| ||||| | ||||||| || ||||||||||||||||||||| Sbjct 1117 CAAAGATTTATGTACAAGGTGGTCAG-GAAGGTATACAATACGTCAAGTTTGATTATGTC 1175 Query 136 AAGAATGGTCAACCACAAACTGGATCACTCCATGGTCTCATGGGTAGACGATTGATGAAA 195 ||||||||||||||||||| ||||||| ||||||||||| |||||||| |||| | | || Sbjct 1176 AAGAATGGTCAACCACAAAGTGGATCAGTCCATGGTCTCTTGGGTAGAGGATTCACGCAA 1235 Query 196 AAGTTTGAGATTGATCCAGCCAGTGAGTATCTTGTATCCGTTGAGGGTTGGTATGATGAC 255 | |||||||||||||||| ||| ||| ||||||||||||||||||||| |||||||| Sbjct 1236 ACGTTTGAGATTGATCCAACCAATGAACATCTTGTATCCGTTGAGGGTTACTATGATGAA 1295 Query 256 GCTAAGGGTATAATTCAAACACTTAAATTCAAAACCAACAAGAAGACTTCTGATATGATA 315 |||||||| | ||||| |||||||||||||||||||||||||||||||| |||||| Sbjct 1296 TCTAAGGGTTTGGTTCAAGGGCTTAAATTCAAAACCAACAAGAAGACTTCTGACATGATA 1355 Query 316 GGATACAATGCAACTGGTTTGAAGTTTTCACTTAAAGTTAACGGAAAAAAGATAATTGGC 375 |||||| ||| || ||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1356 GGATACGATGAAAATGGTTTGAAGTTTTCACTTGAAGTTAACGGAAAAAAGATAATTGGC 1415 Query 376 TTCCATGGATATGCTGATACTAATCTCAACTCTCTTGGAGCTTATTTCACAACGGCTCCT 435 ||||||||||||||| | ||| |||| ||||||||||||||||||||| |||||||||| Sbjct 1416 TTCCATGGATATGCTCAGACTTATCTAAACTCTCTTGGAGCTTATTTCGTAACGGCTCCT 1475 Query 436 CCTACTAAATTTGACTGTCAAGGTGGTTCAGGATCCCAGCTTTGGGATGATGGTTCTAAC 495 |||||||||||||||| ||||||||||||||| |||| ||||||||||| ||| ||||| Sbjct 1476 CCTACTAAATTTGACTACCAAGGTGGTTCAGGAGCCCAACTTTGGGATGACGGTACTAAC 1535 Query 496 TACAGTGGTGTGAGAAAGGTTTCCTTTGCGTTAGATGACACCGAGATAAGGAAAATCAAG 555 |||| ||||||||||||| |||||||||||||||||| || ||||||||| |||||| | Sbjct 1536 TACAATGGTGTGAGAAAGATTTCCTTTGCGTTAGATGCCAATGAGATAAGGCAAATCAGG 1595 Query 556 ATTAATTATGACAAAGGTGGCTTAGTGGAAAGACGTGAGTACGGGGGTAACGTAGGACGA 615 ||| |||||||||||||||||||| | |||||||| |||||||||||||||||||||||| Sbjct 1596 ATTGATTATGACAAAGGTGGCTTAATTGAAAGACGAGAGTACGGGGGTAACGTAGGACGA 1655 Query 616 CAAGAGGAGTTTGTGGTCGACTATCCAAGTGAATACATCATATA 659 ||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1656 CAAGAGGAGTTTGTGGTCGACTATCCAAGTGAATATATCATATA 1699 Score = 710 bits (384), Expect = 0.0 Identities = 588/682 (86%), Gaps = 31/682 (5%) Strand=Plus/Plus Query 1 ATGGCCCAGAAGTTGGAAGCAAAAGGCGTAAAAGGAGGCAATCAGTGGGATGATTTAGC- 59 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | Sbjct 126 ATGGCCCAGAAGTTGGAAGCAAAAGGCGGGAAAGGAGGCAATCAGTGGGATGATTTA-CT 184 Query 60 TGACCATGATC-ATGTAACAAAGATAT-ATGTACAAGATGGTCGCAAAGGTATTCAGTAC 117 ||||||||| | || | ||||||| | ||||||||| ||||| |||| ||||||||| Sbjct 185 TGACCATGA-CAATATCGCAAAGAT-TCATGTACAAGGTGGTCATGAAGGGATTCAGTAC 242 Query 118 GTCAAGTTTG---A--TT-A---TG------TCAAGAATGGTCAACCACAAAC-TGGATC 161 |||||||||| | || | || |||||| ||||||||| ||||| |||||| Sbjct 243 GTCAAGTTTGATTATGTTAAGTTTGATAATCTCAAGATTGGTCAACC-CAAACTTGGATC 301 Query 162 ACTCCATGGTCTCAT-GGGTAGACGATTGATGAAAAAGTTTGAGATTGAT-CCAGCCAGT 219 | ||||||||||| | | ||| | |||| | | ||| ||||||||||||| ||| ||||| Sbjct 302 AATCCATGGTCTC-TCGCGTAAAGGATTCACGCAAACGTTTGAGATTGATCCCA-CCAGT 359 Query 220 GAGTATCTTGTATCCGTTGAGGGTTGGTATGATGACGCTAAGGGTATAATTCAAACACTT 279 |||||| ||||||||||||| |||| |||||||| |||||||||| |||||| ||||| Sbjct 360 GAGTATATTGTATCCGTTGAAGGTTACTATGATGAATCTAAGGGTATTATTCAAGCACTT 419 Query 280 AAATTCAAAACCAACAAGAAGACTTCTGATATGATAGGATACAATGCAACTGGTTTGAAG 339 ||||||||||||||||||||||||||||| |||||||||||| ||| || |||||||||| Sbjct 420 AAATTCAAAACCAACAAGAAGACTTCTGACATGATAGGATACGATGAAAATGGTTTGAAG 479 Query 340 TTTTCACTTAAAGTTAACGGAAAAA-AGATAATTGGCTTCCATGGATATGCTGATACTAA 398 || |||||| ||||||| |||||| | ||||||||||| || |||| |||||| ||||| Sbjct 480 TTCTCACTTGAAGTTAAGGGAAAAGCA-ATAATTGGCTTTCACGGATTTGCTGACACTAA 538 Query 399 TCTCAACTCTCTTGGAGCTTATTTCACAACGGCTCCTCCTACTAAATTTGACTGTCAAGG 458 ||| || |||||||||||||||||| || |||||||||| ||||||||||||| |||||| Sbjct 539 TCTAAATTCTCTTGGAGCTTATTTCGCACCGGCTCCTCCAACTAAATTTGACTATCAAGG 598 Query 459 TGGTTCAGGATCCCAGCTTTGGGATGATGGTTCTAACTACAGTGGTGTGAGAAAGGTTTC 518 |||||||||| |||| ||||||||||||||| |||||||| |||||||||||||||||| Sbjct 599 TGGTTCAGGAGCCCAACTTTGGGATGATGGTAGTAACTACAATGGTGTGAGAAAGGTTTC 658 Query 519 CTTTGCGTTAGATGACACCGAGATAAGGAAAATCAAGATT-AATTATGACAAAGGTGGCT 577 ||| ||||||||||||||||||||||| |||||| |||| ||| |||||||| |||||| Sbjct 659 TTTTTCGTTAGATGACACCGAGATAAGGCAAATCAGGATTGAAT-ATGACAAAAGTGGCT 717 Query 578 TAGTGGAAAGACGTGAGTACGGGGGTAACGTAGGACGACAAGAGGAGTTTGTGGTCGACT 637 |||| |||| |||||||||||| ||||||||||||||||||||||||||||| | |||| Sbjct 718 TAGTAGAAAAACGTGAGTACGGAAGTAACGTAGGACGACAAGAGGAGTTTGTGCTGGACT 777 Query 638 ATCCAAGTGAATACATCATATA 659 |||| | ||||||||||||||| Sbjct 778 ATCCGACTGAATACATCATATA 799 Score = 617 bits (334), Expect = 6e-176 Identities = 413/448 (92%), Gaps = 17/448 (4%) Strand=Plus/Plus Query 831 TCTTCCTCCTTCCGCTGAAACACTACAAGCAAAAGGTGGTGAAGGAGGAGATCCATGGAA 890 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 1913 TCTTCCTCCTTCCGCTGAAACACTACAAGCAAAAGGAGGTGAAGGAGGAGATCCATGGAG 1972 Query 891 CGATGGTGTTTTCAACGGTGTGAGGAAAATATATGTAGGACAAGGTGGAAATGGTGTCAG 950 ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| Sbjct 1973 CGATGGTGTTTTCAACGGTGTGAGGAATATATATGTAGGACAAGGTGAAAATGGTGTCAG 2032 Query 951 TGCCGTCAAGTTTGTGTATGATAAGGACTCTCACGTGGCTGAAGGGAATGATCATGGGAA 1010 |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct 2033 TGCCGTCAAGTTTGTGTATGATAAAGACTCTCAGGTGGCTGAAGGGAATGATCATGGGAA 2092 Query 1011 -CCAAACACTTCTTGGATACGAGGAG---AA--T--A-T--CCTAGTGAGTACATCACCG 1059 |||| |||||||||||||||||||| || | | | || ||||| ||||||||| Sbjct 2093 ACCAA-CACTTCTTGGATACGAGGAGTTCAAGCTTGAATATCCGAGTGAATACATCACCA 2151 Query 1060 CGGTGGAAG-TT-T---GACAAAATATTTGGAAGTGGAGGCGGAGTTATAACCATGCTTA 1114 ||||||||| || | |||||||||||||||||||||||||| |||||||||||||||| Sbjct 2152 CGGTGGAAGGTTGTTTTGACAAAATATTTGGAAGTGGAGGCGGCGTTATAACCATGCTTA 2211 Query 1115 AGTTCAAGACCAACAAACGAATCTCTCCACCGTTTGGACTCGAAACAACATCAAGCTTTG 1174 ||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||| Sbjct 2212 AGTTCAAGACCAACAAACGAACCTCTCCGCCGTTTGGACTCGAAACAACATCAAACTTTG 2271 Query 1175 TTCTTGGGAAGGAAGGTTATAAAATTGTAGGGTTCCACGGAAAATCTAGTCATGAGCTTC 1234 |||| |||||||||||||| |||||||||||||||||||||| ||||||||||||||||| Sbjct 2272 TTCTCGGGAAGGAAGGTTACAAAATTGTAGGGTTCCACGGAACATCTAGTCATGAGCTTC 2331 Query 1235 ACCAGCTCGGGGTATATGTCGTGCCCAT 1262 | |||||||||||||||||| ||||||| Sbjct 2332 ATCAGCTCGGGGTATATGTCATGCCCAT 2359 Score = 174 bits (94), Expect = 2e-42 Identities = 127/143 (89%), Gaps = 2/143 (1%) Strand=Plus/Plus Query 665 GGATAACCTCTCCGATATTTGGAAAGGTTGCTACTCGCAAATTCGTTTTTGAAAGCAACG 724 ||| |||||||||||||||||||||||||||| |||| |||||||| ||||||||||| | Sbjct 1777 GGAGAACCTCTCCGATATTTGGAAAGGTTGCTGCTCGTAAATTCGTGTTTGAAAGCAATG 1836 Query 725 GTAGTGCCCTTATCGGGTTCCATGGACGAGCAGCTGTTGCTCTAGATGCCATCGGAGCTT 784 ||||||| ||||||||||| ||||| || || |||| ||| |||||||||||||||||| Sbjct 1837 GTAGTGCTCTTATCGGGTTTCATGGGCGGGCTGCTGCTGCAGTAGATGCCATCGGAGCTT 1896 Query 785 -TTGTCTCCCCGTTTATTCTTCC 806 || |||||| |||||||||||| Sbjct 1897 ATT-TCTCCCGGTTTATTCTTCC 1918 > AT5G28520.1 | Symbols: | Mannose-binding lectin superfamily protein | chr5:10493110-10494852 FORWARD LENGTH=1362 Length=1362 Score = 364 bits (197), Expect = 9e-100 Identities = 372/452 (82%), Gaps = 29/452 (6%) Strand=Plus/Plus Query 1 ATGGCCCAGAAGTTGGAAGCAAAAGGCGTAAAAGGAGGCAAT-CAGTGGGATGATTTAGC 59 ||||| |||||||| ||||||| | | || | ||||| | ||||||||||||| | | Sbjct 1 ATGGCTCAGAAGTTAGAAGCAATA-G-GT---A-GAGGC-CTCCAGTGGGATGATTCATC 53 Query 60 TGACCATGATC-ATGTAACAAAGA-TATATGTACAAGATGGTCGCAAAGGTATTCAGTAC 117 ||||||||| | |||||||||||| | | ||||| || |||||| |||| ||||||||| Sbjct 54 TGACCATGA-CAATGTAACAAAGATTCT-TGTACGAGGTGGTCGTGAAGGCATTCAGTAC 111 Query 118 GTCAAGTTTGATTATGTCAAGAATGGTCAACCACAAACTGGATCACTCCATGGTCTCAT- 176 |||||||||||||||||||||| ||| ||||| |||||||||| | ||||||||||| | Sbjct 112 GTCAAGTTTGATTATGTCAAGAGTGGGCAACCCCAAACTGGATTAATCCATGGTCTC-TC 170 Query 177 GGGTAGACGATTGA-TGA-A-AAA-GTTTGAGATTGATCCAGCCA-G-TGAGTATCTTGT 230 ||||||| || || | | | ||| ||||||||||||| || | | ||| |||| || Sbjct 171 GGGTAGAGGA-GGATTCACACAAACGTTTGAGATTGAT-CA-AAAGGATGAACATCTAGT 227 Query 231 ATCCGTTGAGGGTTGGTATGATGACGCTAAGGGTATAATTCAAACACTTAAATTCAAAAC 290 ||| |||||||| | ||||||| | |||||||| | || ||| |||||||||||||||| Sbjct 228 ATCTGTTGAGGGCTACTATGATGTCACTAAGGGTGTGATCCAAGCACTTAAATTCAAAAC 287 Query 291 CAACAAGAAGACTTCTGATATGATAGGATACAATG-CAACTGGT-TTGAAGTTTTCACTT 348 ||||||||||||||| || |||||||||||| ||| || | ||| || ||| |||||||| Sbjct 288 CAACAAGAAGACTTCGGAGATGATAGGATACGATGACA-CGGGTATT-AAGCTTTCACTT 345 Query 349 AAAGTTAACGGAAAAAAGATAATTGGCTTCCATGGATATGCTGATACTAATCTCAA-CTC 407 |||| || || ||||||||||||||||||||||||||||| || ||||| || || ||| Sbjct 346 GAAGTCAAGGGTAAAAAGATAATTGGCTTCCATGGATATGCCGAGACTAA-CTTAAACTC 404 Query 408 TCTTGGAGCTTATTTCACAACGGCTCCTCCTA 439 ||||||||||||||| |||||| || ||||| Sbjct 405 TCTTGGAGCTTATTTTACAACGACTGGTCCTA 436 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 62549879070 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5