BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg913208 Length=663 Score E Sequences producing significant alignments: (Bits) Value AT1G33830.1 | Symbols: | P-loop containing nucleoside triphosp... 1014 0.0 > AT1G33830.1 | Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:12279947-12281406 REVERSE LENGTH=678 Length=678 Score = 1014 bits (549), Expect = 0.0 Identities = 615/646 (95%), Gaps = 8/646 (1%) Strand=Plus/Plus Query 1 ATGGCTGAGCAGGAATGGCCCGTTACAAACTTAATTCTCTTAGGTCGT-GCCGGAAATGG 59 ||||||||||||||||| ||||||||||||||| ||||| |||||||| | || |||||| Sbjct 1 ATGGCTGAGCAGGAATGCCCCGTTACAAACTTACTTCTCCTAGGTCGTAG-CGAAAATGG 59 Query 60 AAAAAGCAGCACCGGGAACACCATTATCGATCAAAAATATTTCGAAGTAAATTT-TCTTG 118 |||||||||||||||||||||||| |||| | |||||||||||||||||||||| | ||| Sbjct 60 AAAAAGCAGCACCGGGAACACCATCATCGGTGAAAAATATTTCGAAGTAAATTTGT-TTG 118 Query 119 G-AGAAGATATGGACCAGAGATGTAAGATGTTCAGAGCTGTAATAAAAGATGGCCCAATA 177 | || |||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct 119 GAAG-AGATATGGACCAGAGATGTAAGATGTTCAGAGCTTTAATAGAAGATGGCCCAATA 177 Query 178 ATCAATGTGATTGACACTCCTGGTTTGCTCGAGTCATCCGTGTCCGGAGACTATCTCAGT 237 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 178 ATCAATGTGATTGACACTCCTGGTTTGCTCGAGTCATCCGTGTCAGGAGACTATCTCAGT 237 Query 238 AAGGAAATAATGAATTGCTTAACTATGGCGGAAGAAGGAATACATGCTGTGTTGTTTGTT 297 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 238 AAGGAAATAATGAATTGCTTAACTATGGCGGAAGAAGGAATACATGCTGTATTGTTTGTT 297 Query 298 CTGTCTATAACGAATCGGATTTCACAGCGGGAGGAGTTTACATTTAACATATTGCAGCAC 357 ||||||||||||||||| |||||||||||||||||||| |||||||| | ||||||||| Sbjct 298 CTGTCTATAACGAATCGAATTTCACAGCGGGAGGAGTTCACATTTAATACATTGCAGCAG 357 Query 358 ATATTTGATGATAAAATCCTTGACTATTTCATTGTGGTGTTCACTGGTGGTGACGAGTTG 417 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 358 ATATTTGATGATAAAATCCTTGACTATTTCATTGTGGTGTTCACTGGTGGTGATGAGTTG 417 Query 418 GAAGCAGACAACCAGACCTTGGACGATTATTTACGTGAAGGTTGCCCTGAATTTTTGACG 477 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 418 GAAGCAGACAACCAGACCTTGGACGATTATTTACGTGAAGGTTGCCCTGAATTTTTGACG 477 Query 478 AGAGTTCTCAAACTATGTGGAGGACGAAAGGTACTGTTTAACAACAAGACAAAGGATAAA 537 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 478 AGAGTTCTCAAACTATGTGGAGGACGAAAGGTCCTGTTTAACAACAAGACAAAGGATAAA 537 Query 538 GGCAAGAGGACTAAGCAACTTAAGCAGCT-CTTAGCCCATGTCACGGATATTAGAAAGCA 596 |||||||||| |||||||||||| ||||| || ||| |||||||||||||| ||| |||| Sbjct 538 GGCAAGAGGAATAAGCAACTTAACCAGCTTCT-AGCACATGTCACGGATATAAGACAGCA 596 Query 597 AAATGGTGGGATACCGTATACAGAAAATATGCACCGTAAGATCAAG 642 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 597 AAATGGTGGGATACCGTATACAGAAAATATGCACCGTAAGATCAAG 642 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 32049385786 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5