BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg913338 Length=1338 Score E Sequences producing significant alignments: (Bits) Value AT1G31450.1 | Symbols: | Eukaryotic aspartyl protease family p... 1906 0.0 > AT1G31450.1 | Symbols: | Eukaryotic aspartyl protease family protein | chr1:11259872-11261209 REVERSE LENGTH=1338 Length=1338 Score = 1906 bits (1032), Expect = 0.0 Identities = 1249/1351 (92%), Gaps = 26/1351 (2%) Strand=Plus/Plus Query 1 ATGGCAACCAAAACTCTCCTCTACTGTTCGCTCTTAGCCATCACCATCTT-TTTCACTTC 59 ||||||||||||||| | ||||||||||| ||||||||||||| | |||| ||| |||| Sbjct 1 ATGGCAACCAAAACTTTTCTCTACTGTTCTCTCTTAGCCATCAGCTTCTTCTTT-GCTTC 59 Query 60 CACTTCTTCAGCTCACCGGA-AAAACCTAACCGTCGAGCTAATCCACCGTGACTCTCCCC 118 || |||||||||| ||| || | ||| ||||||||||||||||||||||||||||||| | Sbjct 60 CAATTCTTCAGCTAACC-GAGAGAACTTAACCGTCGAGCTAATCCACCGTGACTCTCCTC 118 Query 119 ATTCTCCACTCTACAACCCTCAGCACACTGTCTCCGACCGTCTCAACGCCGCTTTCCTCC 178 |||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||| Sbjct 119 ATTCTCCACTCTACAACCCTCACCACACTGTCTCTGACCGTCTCAACGCTGCTTTCCTCC 178 Query 179 GCTCAATCTCACGTTCCCGCCGTTTCTCAACCAAAACCGATCTCCAATCCGGTTTAATCT 238 | |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct 179 GATCAATCTCACGTTCTCGCCGTTTCACAACCAAAACCGATCTCCAATCCGGTTTAATCT 238 Query 239 CAAATGGCGGCGAATACTTCATGTCCATCTCAATCGGTACTCCACCGTCGAAA-TTCCTT 297 ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || Sbjct 239 CAAATGGCGGCGAATACTTCATGTCCATCTCAATCGGTACTCCACCGTCGAAAGTT--TT 296 Query 298 -GCCATTGCTGACACGGGAAGTGACCTAACATGGGTTCAGTGCAAGCCATGTCAACAATG 356 ||||||||||||||||||||||||||||| ||||| || || ||||||||||||||||| Sbjct 297 CGCCATTGCTGACACGGGAAGTGACCTAACTTGGGTCCAATGTAAGCCATGTCAACAATG 356 Query 357 TTACAAGCAAAACACTCCACTCTTCGACAAGAAGAAATCTTCCACCTACAAAACTGAATC 416 |||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 357 TTACAAACAAAACAGTCCACTCTTCGACAAGAAGAAATCTTCCACCTACAAAACAGAATC 416 Query 417 TTGTGATTCCATAACCTG-CAATGCGTTGTCTGAACACGAAGAAGGTTGCGACGAATCGC 475 ||| ||||| | |||||| ||| || ||||| |||||||||||||| ||||||||||| Sbjct 417 TTGCGATTCAAAAACCTGTCAA-GCCTTGTCCGAACACGAAGAAGGATGCGACGAATC-T 474 Query 476 GCA-ACGCCTGCAAATACCGTTACTCTTATGGAGACGAA-TCGTTTACCAAAGGAGAGGT 533 | || ||||||||||||||||||||||||||| || ||||||||||||||||| || Sbjct 475 AAAGACATCTGCAAATACCGTTACTCTTATGGAGA-TAATTCGTTTACCAAAGGAGATGT 533 Query 534 TGCAACCGAAACAATCTCCATTGATTCTTCCTCTGGCTCCCCTGTTTCTTTCCCCGGTAC 593 ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 534 TGCGACCGAAACAATCTCCATTGATTCTTCCTCTGGCTCCTCTGTTTCTTTCCCCGGTAC 593 Query 594 TGCCTTTGGTTGCGGCTACAACAACGGTGGTACATTCGAAGAAACCGGATCCGGAATCAT 653 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 594 TGTCTTTGGTTGCGGCTACAACAACGGTGGTACATTCGAAGAAACCGGATCCGGAATCAT 653 Query 654 CGGACTCGGAGGTGGTCCATTATCGTTAGTTTCCCAGCTCGGTTCTTCCATAGGGAAGAA 713 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 654 CGGACTCGGAGGTGGTCCATTATCGTTAGTTTCCCAGCTTGGTTCTTCCATAGGGAAGAA 713 Query 714 ATTCTCTTATTGCTTGTCACACACGTCAGCTACAACAAACGGCACAAGCGTCATAAACCT 773 |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 714 ATTCTCGTATTGCTTGTCACACACGGCAGCTACAACAAACGGCACAAGCGTCATAAACCT 773 Query 774 AGGAACCAACTCGATGAC-TTCCAAGCCAAGCAAAGATTCCGCTATTCTCACTACACCGT 832 ||||||||||||||| || |||||| ||||||||||| ||||||| ||||||||||| | Sbjct 774 AGGAACCAACTCGAT-ACCTTCCAATCCAAGCAAAGACTCCGCTACGCTCACTACACCCT 832 Query 833 TAATCCAAAAAGACCCCGAGACTTACTATTTCTTGACTCTCGAAGCAATCACCGTCGGCA 892 ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| Sbjct 833 TAATCCAAAAAGACCCCGAGACTTACTATTTCTTGACACTCGAAGCAGTCACCGTCGGCA 892 Query 893 AAACCAAGCTTCCATACACCGGAGGAGGAGGGTACAGTTTAAACCGGAAATCA--AA-GA 949 ||||||||||||||||||||||||||||| ||| | |||||| |||||||| || || Sbjct 893 AAACCAAGCTTCCATACACCGGAGGAGGA---TACGGATTAAACGGGAAATCATCAAAGA 949 Query 950 AGA-CCGGTAACATCATAATCGACTCCGGCACAACTCTTACGCTTCTCGACTCAGGATTT 1008 || |||| |||||||||||||| ||||| ||||| ||||| |||||||||||||||||| Sbjct 950 -GAACCGGAAACATCATAATCGATTCCGGTACAACCCTTACCCTTCTCGACTCAGGATTT 1008 Query 1009 TATGATGACTTTGGTGCGGTGGTGGAAGAATCAGTGACCGGAGCTAAGCGTGTGAGTGAT 1068 || |||||||||||| ||| |||||||||||||| |||||||| ||||||||||||||| Sbjct 1009 TACGATGACTTTGGTACGGCCGTGGAAGAATCAGTAACCGGAGCAAAGCGTGTGAGTGAT 1068 Query 1069 CCACAAGGGATTTTAACACACTGTTTCAAATCCGGAGACAAAGAGATCGGTTTGCCGACA 1128 ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| | Sbjct 1069 CCACAAGGGCTTTTAACACATTGTTTCAAATCCGGAGACAAAGAGATCGGTTTGCCGGCG 1128 Query 1129 ATAACAATGCATTTCACCGGA-GCCGACGTGAAGCTGAGTCCGATAAACTCGTTCGTGAA 1187 ||||||||||||||||| | | ||||||||||||||||||||||||||| |||||||||| Sbjct 1129 ATAACAATGCATTTCAC-GAACGCCGACGTGAAGCTGAGTCCGATAAACGCGTTCGTGAA 1187 Query 1188 ACTGAGTGAAGATATAGTGTGCTTGAGTATGATTCCGACAACTGAAGTTGCTATATACGG 1247 ||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1188 ACTAAATGAAGATACAGTGTGCTTGAGTATGATTCCGACAACTGAAGTTGCTATATACGG 1247 Query 1248 AAATATGGTTCAAATGGATTTTCTTGTTGGCTATGACTTGGAGACCAAAACGGTATCGTT 1307 ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1248 AAACATGGTTCAAATGGATTTCCTTGTTGGCTATGACTTGGAGACCAAAACGGTATCGTT 1307 Query 1308 TCAACGCATGGATTGCTCCGGGAACTTGTGA 1338 ||||||||||||||||||||||||||| ||| Sbjct 1308 TCAACGCATGGATTGCTCCGGGAACTTATGA 1338 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 65863115040 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5