BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg913344
Length=828
Score E
Sequences producing significant alignments: (Bits) Value
AT1G31390.1 | Symbols: | TRAF-like family protein | chr1:11243... 769 0.0
AT1G31400.1 | Symbols: | TRAF-like family protein | chr1:11245... 676 0.0
AT1G31380.1 | Symbols: | TRAF-like family protein | chr1:11240... 521 3e-147
AT1G31370.1 | Symbols: | Ubiquitin-specific protease family C1... 488 3e-137
AT2G05410.1 | Symbols: | TRAF-like family protein | chr2:19769... 204 1e-51
AT2G05400.1 | Symbols: | Ubiquitin-specific protease family C1... 196 2e-49
AT3G58370.1 | Symbols: | TRAF-like family protein | chr3:21595... 154 1e-36
AT3G58410.1 | Symbols: | TRAF-like family protein | chr3:21604... 132 6e-30
AT3G58340.1 | Symbols: | TRAF-like family protein | chr3:21589... 124 1e-27
AT3G58220.2 | Symbols: | TRAF-like family protein | chr3:21564... 117 2e-25
AT3G58380.1 | Symbols: | TRAF-like family protein | chr3:21597... 110 3e-23
AT3G44800.1 | Symbols: | Meprin and TRAF (MATH) homology domai... 99.0 6e-20
> AT1G31390.1 | Symbols: | TRAF-like family protein | chr1:11243191-11244392
REVERSE LENGTH=807
Length=807
Score = 769 bits (416), Expect = 0.0
Identities = 675/797 (85%), Gaps = 29/797 (4%)
Strand=Plus/Plus
Query 1 ATGGAGGAGCAATATGAAAAGAAGATAACCTGGACGATTAAGAATTTCTCCTCTT-TGCC 59
||||| || |||||||||||||||||||| |||||||||||||||||||||| || |||
Sbjct 1 ATGGAAGATCAATATGAAAAGAAGATAACATGGACGATTAAGAATTTCTCCT-TTGTGCA 59
Query 60 ATCTGATA-AAATTTG-TTCTGATAATTTCGTAGTTGGTGATTCCAAATGGCGTCTTGTG 117
|||| | | || ||| |||||||| ||||||||||||||| |||||||||| |||||||
Sbjct 60 ATCTCA-AGCAA-TTGATTCTGATATTTTCGTAGTTGGTGACTCCAAATGGCATCTTGTG 117
Query 118 GCCTATCCCAAGGGACATGGGGATAGT-CTTAATAAAAGTTTGTCTCTGTTTCTGGCTGT 176
||||||||||||||| |||| || ||| | ||||||| ||||||| |||| |||| |||
Sbjct 118 GCCTATCCCAAGGGAAATGGTGAAAGTAC-TAATAAATGTTTGTCACTGTATCTGAATGT 176
Query 177 TGCTGA-TTCTGAATCTTTGCCTTATGGTTGGAAAAGAGACA-CAAAGTATCGCCAAACT 234
||| || ||| ||||||||||| |||||||||||||| ||| |||| |||||| ||||
Sbjct 177 TGCGGATTTC-CAATCTTTGCCTAATGGTTGGAAAAGACACATCAAA-TATCGCTTAACT 234
Query 235 GTTGTTAATCAAACT-TCGGAGAAACTCTCCCAACAGAAAG-GA-A-AACCCTGGTTTAA 290
||||||||||||| | ||||||||||| ||| ||||| ||| | | || ||||||| |
Sbjct 235 GTTGTTAATCAAA-TGTCGGAGAAACTTTCCGAACAGGAAGTAATACAAGGCTGGTTTTA 293
Query 291 TCAGAA-TTGT-GTCAGCTGGGGTTTCCAATCAATGGTTCCCCTTACCGAACTTCTTGAC 348
| | || || | | | || ||||||||| ||||| |||||||| || |||||||||||
Sbjct 294 TAAAAACTT-TCAT-ATCTCTGGTTTCCAAACAATGCTTCCCCTTTCCAAACTTCTTGAC 351
Query 349 ATAAATGGTGGGTTTCTGGTGAATGGAGAAATCAAGATTGTTGCCGAGGTTGGTGTTCTT 408
| |||||||||||||||||||||||| || |||||||||||| |||||| |||||||||
Sbjct 352 AAAAATGGTGGGTTTCTGGTGAATGGTGATGTCAAGATTGTTGTCGAGGTAGGTGTTCTT 411
Query 409 GAAGTTGTTGGCAAGTCAGATGTGTTAGAGGAAACTTCATTAGTAAATGAAAGCATCGAT 468
||||| |||||||| |||||||||||||||||||||| |||||| ||||||||||||||
Sbjct 412 GAAGTCGTTGGCAAATCAGATGTGTTAGAGGAAACTTTATTAGTTCATGAAAGCATCGAT 471
Query 469 GTCAATGGGTTTCAAGTTCTTCCTTCACAGGTAGAATCTGTGAAGAGTCTTTTT-ATAAA 527
||||||||||||||||||||||||||||||||||||||||||| | ||| ||| | ||
Sbjct 472 ATCAATGGGTTTCAAGTTCTTCCTTCACAGGTAGAATCTGTGAACAATCTCTTTGAGAA- 530
Query 528 GCACCCAGACATTGCATCACAATTCCGT-CCAAAGAACCCACACCTGAGAACAGCATACT 586
|||||||||||| | |||| |||| ||| |||| |||||||| |||||||| ||||||
Sbjct 531 GCACCCAGACATCGTATCAGAATTTCGTTCCAA-GAACCCACTTATGAGAACAACATACT 589
Query 587 TGAAT-AGCATACTAAGCTTGTCAGAGAGTC-TGTGCCAATCCCCCGAGGAACTCTCCAA 644
||||| | | ||||| | ||| | |||| || ||||| | ||| | |||||||||||||
Sbjct 590 TGAATGACC-TACTATGTTTGACTGAGA-TCCTGTGCGAGTCCTCTGAGGAACTCTCCAC 647
Query 645 TGCTGATCTGGCTAATGCATACTGTACACTAACTTGTGTGACAAAAGCGGGGTTTAAATT 704
|| |||| ||||||| || || | ||||||||||||| ||| ||||||||||||||| ||
Sbjct 648 TGGTGATATGGCTAACGCGTATTCTACACTAACTTGTTTGAAAAAAGCGGGGTTTAAGTT 707
Query 705 GGATTGGTTGGAAAAGAAACTGAAAGAGATTGGTGAGGCTCGGCTGCAAGAGATTGAGGA 764
||||||| |||| ||||||||||||||| || ||||||||||| ||||||| ||||| ||
Sbjct 708 GGATTGGCTGGAGAAGAAACTGAAAGAGGTTTGTGAGGCTCGGGTGCAAGAAATTGATGA 767
Query 765 AGAATTGAAGGACATGA 781
||| | ||||||| |||
Sbjct 768 AGAGTGGAAGGACTTGA 784
> AT1G31400.1 | Symbols: | TRAF-like family protein | chr1:11245225-11246481
REVERSE LENGTH=837
Length=837
Score = 676 bits (366), Expect = 0.0
Identities = 654/789 (83%), Gaps = 36/789 (5%)
Strand=Plus/Plus
Query 10 CAATATGAAAAGAAGATAACCTGGACGATTAAGAATTTCTCCTCTTTGCCATCTGATAAA 69
||||||||||||| |||||| |||||||||||||||||||||||||||| |||| || |
Sbjct 10 CAATATGAAAAGAGGATAACATGGACGATTAAGAATTTCTCCTCTTTGCAATCTCATGCA 69
Query 70 ATTTGTTCTGATAATTTCGTAGTTGGTGATTCCAAATGGCGTCTTGTGGCCTATCCCAAG 129
|||| || ||||| ||| |||||||| || ||||||||| |||| ||||||||||||||
Sbjct 70 ATTTATTTTGATATTTTTGTAGTTGGGGACACCAAATGGCATCTTCTGGCCTATCCCAAG 129
Query 130 GGACATGGGGATAGTC-TTAATAAAAGTTTGTCTCTGTTTC-TGGCTGTTGCTGATTCTG 187
||| |||| ||||| | |||||||| ||||||||||||||| ||| |||| ||||| |||
Sbjct 130 GGATATGGTGATAG-CATTAATAAATGTTTGTCTCTGTTTCTTGG-TGTTCCTGATCCTG 187
Query 188 AAT-CTTTGCCTTATGGTTGGAAAAGAGACA-CAAAGTATCGCCAAACTGTTGTTAATCA 245
|| |||||||| ||||||||||||| ||| || | ||||| | ||||||||||||||
Sbjct 188 -ATGATTTGCCTTCTGGTTGGAAAAGACACATCATA-TATCGTCTTACTGTTGTTAATCA 245
Query 246 AACT-TCGGAGAAACTCTCCCAACAGAAAGGAAAAC---CCTGGTTTAATCAGAATTGTG 301
|| | ||||||||||||||| ||||| ||| | || | ||||| | | || | |
Sbjct 246 AA-TGTCGGAGAAACTCTCCAAACAGGAAGTAGCACGGGGCGGGTTTTACCCGAGGTCTC 304
Query 302 TCAGCTGGGGTTTCCAA-TCAATGGTTCCCCTTACCGAACTTCTTGACATAAATGGTGGG 360
| | || |||| |||| | |||| |||| ||||| ||| ||| | ||||||||
Sbjct 305 TTACCTTCGGTTCCCAAGT-AATGCTTCCACTTACAGAA---CTT----T--ATGGTGGG 354
Query 361 TTTCTGGTGAATGGAGAAATCAAGATTGTTGCCGAGGTTGGTGTTCTTGAAGTTGTTGGC 420
||| |||| | ||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct 355 TTTTTGGTTAGTGGCCAAGTCAAGATTGTTGCCGAGGTTGGTGTTCTTGAAGTTGTTGGC 414
Query 421 AAGTCAGATGTGTTAGAGGAAACTTCATTAGTAAATGAAAGCATCGATGTCAATGGGTTT 480
||||||||||||||||||||||||| ||||| |||| | ||||| ||||||||||||||
Sbjct 415 AAGTCAGATGTGTTAGAGGAAACTTTGTTAGTTAATGGAGGCATCAATGTCAATGGGTTT 474
Query 481 CAAGTTCTTCCTTCACAGGTAGAATCTGTGAAGAGTCTTTTTATAAAGCACCCAGACATT 540
|||||||||||||||||||||||||||||||| | ||| || | ||| ||||||||||||
Sbjct 475 CAAGTTCTTCCTTCACAGGTAGAATCTGTGAACAATCTCTTCAAAAATCACCCAGACATT 534
Query 541 GCATCACAA-TTCCGTCCA-AAGAACCCACACCTGAGAAC-AGCATACTTGAATAGCATA 597
|||||| || ||||||| || ||| | || || ||||| | |||||||||||||| ||
Sbjct 535 GCATCA-AACTTCCGTCTGGAA-AACACTCATCTAAGAACTA-CATACTTGAATAGCCTA 591
Query 598 CTAAGCTTGTCAGAGAGTCTGTGCCAATCCCC-CGAGGAACTCTCCAATGCTGATCTGGC 656
||| ||||| | ||| ||||||||| ||||| | | |||||||||||| |||||| ||
Sbjct 592 CTATGCTTGACTGAGCTTCTGTGCCAGTCCCCTC-ATAAACTCTCCAATGTTGATCTCGC 650
Query 657 TAATGCATACTGTACACTAACTTGTGTGACAAAAGCGGGGTTTAAATTGGATTGGTTGGA 716
||||| ||||||| |||||||||||||||||||| || ||||| ||||||||||||||
Sbjct 651 CAATGCGCACTGTACTCTAACTTGTGTGACAAAAGCCGGTTTTAAGTTGGATTGGTTGGA 710
Query 717 AAAGAAACTGAAAGAGATTGGTGAGGCTCGGCTGCAAGAGA-TTGAGGAAGAATT-GAAG 774
|||||||||||||||| ||||| || ||||| ||||| | | |||| || |||| ||||
Sbjct 711 AAAGAAACTGAAAGAGGTTGGTAAGACTCGGATGCAACA-ACTTGAACAA-AATTTGAAG 768
Query 775 GACATGAAG 783
||| |||||
Sbjct 769 GACTTGAAG 777
> AT1G31380.1 | Symbols: | TRAF-like family protein | chr1:11240451-11241099
REVERSE LENGTH=528
Length=528
Score = 521 bits (282), Expect = 3e-147
Identities = 419/485 (86%), Gaps = 10/485 (2%)
Strand=Plus/Plus
Query 322 ATGGTTCCCCTTACCGAACTTCTTGACATAAATGGTGGGTTTCTGGTGAATGGAGAAATC 381
||||||||||||||| |||||||||||| ||||||||||||| |||||||||||||| ||
Sbjct 1 ATGGTTCCCCTTACCAAACTTCTTGACAAAAATGGTGGGTTTATGGTGAATGGAGAAGTC 60
Query 382 AAGATTGTTGCCGAGGTTGGTGTTCTTGAAGTTGTTGGCAAGTCAGATGTGTTAGAGGAA 441
||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 61 AAGATTGTTGCTGAGGTTGGTGTTCTTGAAGTTGTTGGCAAATCAGATGTGTTAGAGGAA 120
Query 442 ACTTCATTAGTAAAT-GAAAGCATCG-ATGTCAATGGGTTTCAAGTTCTTCCTTCACAGG 499
||||||||||| || |||||||| | |||||||||||||||||||||||||||||||||
Sbjct 121 ACTTCATTAGT-GATGGAAAGCAT-GTATGTCAATGGGTTTCAAGTTCTTCCTTCACAGG 178
Query 500 TAGAATCTGTGAAGAGTCTTTTT-ATAAAGCACCCAGACATTGCATCACAATTCCGTCCA 558
|||||| |||||||||||| ||| | |||||||||||| || | |||| || ||| ||
Sbjct 179 TAGAATTTGTGAAGAGTCTGTTTGA-AAAGCACCCAGATATCGAATCAAAACTCCATCTG 237
Query 559 AAGAACCCACACCTGAGAACAGCATACTTGAATAGCATACTAAGCTTGTCAGAGAGTCTG 618
||||||||||| |||||| | |||||||||||||| |||||| |||| | |||| ||||
Sbjct 238 AAGAACCCACATATGAGAATAACATACTTGAATAGCCTACTAACCTTGACTGAGATTCTG 297
Query 619 TGCCAATCCCCCGAGGAAC-TCTCCAATGCTGATCTGGCTAATGCATACTGTACACTAAC 677
|||| ||||| ||| ||| | ||||||| |||| |||| || ||||| | ||| || |
Sbjct 298 AGCCAGTCCCCTGAG-AACATTTCCAATGATGATTTGGCCAACGCATATTCTACGCTCTC 356
Query 678 TTGTGTGACAAAAGCGGGGTTTAAATTGGATTGGTTGGAAAAGAAACTGAAAGA-GATTG 736
|| |||||||||||| |||||||| || ||||||||||| ||| | |||||||| | |||
Sbjct 357 TTATGTGACAAAAGCCGGGTTTAAGTTAGATTGGTTGGAGAAGGACCTGAAAGATG-TTG 415
Query 737 GTGAGGCTCGGCTGCAAGAGATTGAGGAAGAATTGAAGGACATGAAGCAAACGTGCGTAG 796
||||| |||| | ||||| ||||||||||| ||||| ||||| ||||||| ||||||||
Sbjct 416 GTGAGACTCGTATTCAAGAAATTGAGGAAGAGTTGAAAGACATAAAGCAAAAGTGCGTAG 475
Query 797 ACATG 801
| |||
Sbjct 476 AGATG 480
> AT1G31370.1 | Symbols: | Ubiquitin-specific protease family
C19-related protein | chr1:11238298-11239363 REVERSE LENGTH=582
Length=582
Score = 488 bits (264), Expect = 3e-137
Identities = 370/419 (88%), Gaps = 16/419 (4%)
Strand=Plus/Plus
Query 303 CAGCTGGGGTTTCCAATCAATGGTTCCCCTTACCGAACTTCTTGACATAAATGGTGGGTT 362
|||||| ||||||| ||||||| ||||||||| ||||||||||||| ||||||| |||||
Sbjct 168 CAGCTGTGGTTTCCGATCAATGCTTCCCCTTAACGAACTTCTTGACGTAAATGGCGGGTT 227
Query 363 TCTGGTGAATGGAGAAATCAAGATTGTTGCCGAGGTTGGTGTTCTTGAAGTTGTTGGCAA 422
| |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct 228 TATGGTGAATGGAGAAGTCAAGATTGTTGCCGAGGTTGGTGTTCTTGAAGTTGTTCGCAA 287
Query 423 GTCAGATGTGTTAGAGGAAACTTCATTAGTAAAT-GAAAGCATCGATGTCAATGGGTTTC 481
||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||
Sbjct 288 ATCAGATGTGTTAGTGGAAACTTCATTAGT-GATGGAAAGCATCGATGTCAATGGGTTTC 346
Query 482 AAGTTCTTCCTTCACAGGTAGAATCTGTGAAGAGTCTT-TTT-ATAAAGCACCCAGACAT 539
||||||||||||||||||||||||||||||||||| || ||| | |||||||||||||||
Sbjct 347 AAGTTCTTCCTTCACAGGTAGAATCTGTGAAGAGT-TTGTTTGA-AAAGCACCCAGACAT 404
Query 540 TGCATC-ACAATTCCGTCCAAAGAACCCACACCTGAGAACAGCATACTTGAATAG-CATA 597
|||||| | |||||||||||||||||||||| ||||||||| ||| ||||||||| | ||
Sbjct 405 TGCATCGA-AATTCCGTCCAAAGAACCCACATCTGAGAACAACATCCTTGAATAGTC-TA 462
Query 598 CTAAGCTTGTCAGAGAGTCTGTGCCAAT--C---CCCC-GAGGAACTCTCCAATGCTGAT 651
||||||||| | |||| |||||| || | | |||| ||||||||||||| || ||||
Sbjct 463 CTAAGCTTGACTGAGATTCTGTGTCACTGTCAGTCCCCTGAGGAACTCTCCATTGATGAT 522
Query 652 CTGGCTAATGCATACTGTACACTAACTTGTGTGACAAAAGCGGGGTTTAAATTGGATTG 710
|| || || || || | |||||||| |||| |||||||||| ||||| || ||||||||
Sbjct 523 CTTGCCAACGCGTATTCTACACTAATTTGTTTGACAAAAGCTGGGTTCAAGTTGGATTG 581
> AT2G05410.1 | Symbols: | TRAF-like family protein | chr2:1976918-1978553
FORWARD LENGTH=1082
Length=1082
Score = 204 bits (110), Expect = 1e-51
Identities = 472/641 (74%), Gaps = 47/641 (7%)
Strand=Plus/Plus
Query 107 GGCGTCTTGTGGCCTATCCCAAGGGACATGGGGATAGTCTTAATAAAAGTTTGTCTCTGT 166
||||| || ||||||| ||||||||| || | || | | || | ||||| |||||||
Sbjct 277 GGCGTATTATGGCCTACCCCAAGGGA-ATTAACAAAG-C-TCATGATAGTTTTTCTCTGT 333
Query 167 TTCT-GGCTGTTGCTGAT-TCTGAATCTTTGCCTTA-TGGTTGGAAAAGAGACAC-AAAG 222
|||| | ||| ||||| | |||||||| || || ||| ||| |||| || | ||||
Sbjct 334 TTCTAAAC-GTTCCTGATAAC-GAATCTTTACC-TACTGGATGGCGAAGACACGCTAAAG 390
Query 223 TATCGCCAAACTGTT-GTTAATCAAACTTCGGAGAAACTCTCCCAACAG-AAAG-GA--A 277
| || | | || || |||||| ||| || |||||||| |||| | |||| ||
Sbjct 391 TTTC-TTTTAGT-TTAGTAAATCAAGGTTCAGAAAAACTCTCTCAAC-GAAAAGTGACTC 447
Query 278 AACCCTGGTTTAATCAGAATTG-TGTCAGCT-GGGGTTTCCAATCAATGGTTCCCCTTAC 335
| | ||||||| ||| || | | | | || |||||||||| | |||| || ||| ||
Sbjct 448 AGCACTGGTTTGTTCA-AAAGGCTTTTACCTGGGGGTTTCCAGT-AATGATTACCCACAC 505
Query 336 CGAACTTCTTGACATAAATGGTGGGTTTCTGGTGAATGGAGAAATC-AAGATTGTTGCCG 394
||||||| | || |||| | || |||||||| ||||||||| || ||| |||||||
Sbjct 506 CGAACTTAACGCCA-AAAT-G-GGATTTCTGGTAAATGGAGAACTCAAAG-TTGTTGCTA 561
Query 395 AGGTTG-GTGTTCTTGAAGTTGTTGGCAAGTCAGATGTGTTAGAGGAAACTTCATTAGTA 453
|| | | | |||||||||||||| || || | |||||| | | ||||| ||||| | |
Sbjct 562 AGATAGAG-GTTCTTGAAGTTGTAGGGAAATTAGATGTATCAAAGGAATCTTCACCAAT- 619
Query 454 AATG-AAAGCATCGATGTCAATGGGTTTCAAGTTCTTCCTTCACAGGTAGAATCTGTGAA 512
|||| ||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 620 AATGAAAACCATAGATGTCAATGGGTTTCAAGTTCTTCCTTCACAGGTAGATTCTGTGAA 679
Query 513 GAGTCTT-TTT-ATAAAGCACCCAGACATTGCATCACAATTCCGTCC-AAAGAACCCACA 569
| || || ||| | ||| ||| ||| |||| |||| |||| |||| ||| || ||| |
Sbjct 680 GCGT-TTGTTTGAAAAAA-ACCTAGATATTGTATCAAAATTTCGTCTTAAA-AATCCATA 736
Query 570 CCTGA-GAACAGCATACTTGAATAGCATACTAAGCTTGTCAGAGA-GTCTGTGCCAATCC 627
||| || | || | | ||||| | | || || || | || | | ||||| |||||
Sbjct 737 TTTGAAGA-CTGCGTGCATGAATCTCCTCCTGAGTTTAACCGAAACG-CTGTGTCAATCG 794
Query 628 CC-CGAGGAACTCTCCAATGCTGATCTGGCTAATGCATACTGTA-CACTAACTTGTGTGA 685
|| | || |||||||||||| || ||| || ||||| ||| |||| | | | |||
Sbjct 795 CCTCAAG-AACTCTCCAATGATGGTCTCTCTGATGCAGG-TGTTGCACTGGCATATTTGA 852
Query 686 CA-AAAGCGGGGTTTAAATTGGATTGGTTGGAAAAGAAACT 725
| ||| | ||| |||| |||||||||||||| ||||||||
Sbjct 853 TAGAAA-CAGGGCTTAAGTTGGATTGGTTGGAGAAGAAACT 892
> AT2G05400.1 | Symbols: | Ubiquitin-specific protease family
C19-related protein | chr2:1974886-1976570 FORWARD LENGTH=1415
Length=1415
Score = 196 bits (106), Expect = 2e-49
Identities = 292/378 (77%), Gaps = 28/378 (7%)
Strand=Plus/Plus
Query 362 TTCTG-GTGAATGGAGAAATCA-AGATTGTTGCCGAGGTTG-GTGTTCTTGAAGTTGTTG 418
||||| | ||| |||||| ||| | |||||||| |||| | | |||||||||||||| |
Sbjct 637 TTCTGAG-GAACGGAGAACTCACCG-TTGTTGCCAAGGTAGAG-GTTCTTGAAGTTGTAG 693
Query 419 GCAAGTCAGATGTGTTAGAGGAAACTTCATTAGTAAATGAAAGCATCGATGTCAATGGGT 478
| || | |||||| | ||||||| ||||| ||||| ||||| ||| ||||||||||| |
Sbjct 694 GAAAATTAGATGTATCAGAGGAATCTTCACCAGTAATTGAAACCATAGATGTCAATGGAT 753
Query 479 TTCAAGTTCTTCCTTCACAGGTAGAATCTGTGAAGAGTCTTT-TTAT-AAAG-CACCCAG 535
||||||||||||||||||||||||||| || |||| ||||| || | |||| || | ||
Sbjct 754 TTCAAGTTCTTCCTTCACAGGTAGAATATGCGAAG--TCTTTATT-TGAAAGACATCTAG 810
Query 536 ACATTGCATCACAATTCCGTCCAAAGAACCCACACCTGA-GAACAGCATACTTGAATAG- 593
| ||||||||| |||||||||||||||| ||| |||| | || | || ||| ||||| |
Sbjct 811 ATATTGCATCAAAATTCCGTCCAAAGAATCCATACCTAAAGA-CGGCGTACATGAAT-GT 868
Query 594 CATACTA-AGCTTGTC--AGA-GAGTCTGTGCCAATCCCC-CGAGGAACTCTCCAATGCT 648
| | || || || | | | || | ||| | |||| || | || |||||||||||| |
Sbjct 869 CCT-CTTGAGTTTAACCCAAACGA-TATGT-C-AATCTCCTCAAG-AACTCTCCAATGAT 923
Query 649 GATCTGGCTAATGCATACTG-TACACTAACTTGTGTGACAAAAGCGGGGTTTAAATTGGA 707
||||| || ||||| | | | || | | | | ||| | |||| |||||| | |||||
Sbjct 924 GATCTCTCTGATGCAGGC-GCTGCATTGGCATATTTGAGAGAAGCAGGGTTTGAGTTGGA 982
Query 708 TTGGTTGGAAAAGAAACT 725
||||||||| ||||||||
Sbjct 983 TTGGTTGGAGAAGAAACT 1000
> AT3G58370.1 | Symbols: | TRAF-like family protein | chr3:21595774-21596538
REVERSE LENGTH=660
Length=660
Score = 154 bits (83), Expect = 1e-36
Identities = 110/123 (89%), Gaps = 2/123 (2%)
Strand=Plus/Plus
Query 442 ACTTCATTAGTAAATGAAAGCATCGATGTCAATGGGTTTCAAGTTCTTCCTTCACAGGTA 501
|||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 199 ACTTCACCAGTAAAGGAAAGCATTGATGTCAATGGGTTTCAAGTTCTTCCTTCACAGGTA 258
Query 502 GAATCTGTGAAGAGTCTTTTTATAAAG-CACCCAGACATTGCATCACAATTCCGTCCAAA 560
|||||||||||| || | ||| |||| || |||||| |||||||| |||||||||||||
Sbjct 259 GAATCTGTGAAGTGTATATTTG-AAAGACATCCAGACTTTGCATCAAAATTCCGTCCAAA 317
Query 561 GAA 563
|||
Sbjct 318 GAA 320
> AT3G58410.1 | Symbols: | TRAF-like family protein | chr3:21604871-21606229
REVERSE LENGTH=987
Length=987
Score = 132 bits (71), Expect = 6e-30
Identities = 156/195 (80%), Gaps = 14/195 (7%)
Strand=Plus/Plus
Query 436 GAGGAAACTTCA-TTAGTAAATGAAAGCATCGATGTCAATGGGTTTCAAGTTCTTCCTTC 494
|||||| ||||| || ||| |||||||| || ||||| || |||||||||||||||||
Sbjct 520 GAGGAAGCTTCACCCAG-AAAGGAAAGCATGGAGGTCAACGGATTTCAAGTTCTTCCTTC 578
Query 495 ACAGGTAGAATCTGTGAAGAGTCT-T-TTTATAAAG-CACCCAGACATTGCATCACAATT 551
||||||||||||||||| || | | | ||| |||| ||||| |||||||||||| ||||
Sbjct 579 ACAGGTAGAATCTGTGA-GACT-TATATTTG-AAAGACACCCTGACATTGCATCAGAATT 635
Query 552 CCGTCCAAAGAACCCACACCTGAG-AACAGCATACTTGAATAGCATACTAAGC-TTGTCA 609
|||| ||||||||| | | ||||| || ||||| | || || | | || ||| ||||
Sbjct 636 CCGTGCAAAGAACCAATATCTGAGGAA-AGCATGCATGGATTTCCTTCTCAGCCTTGTT- 693
Query 610 GAGA-GTCTGTGCCA 623
|||| | ||||||||
Sbjct 694 GAGACG-CTGTGCCA 707
> AT3G58340.1 | Symbols: | TRAF-like family protein | chr3:21589071-21590401
REVERSE LENGTH=978
Length=978
Score = 124 bits (67), Expect = 1e-27
Identities = 122/147 (83%), Gaps = 10/147 (7%)
Strand=Plus/Plus
Query 450 AGTAAATGAAAGCATCGATGTCAATGGGTTTCAAGTTCTTCCTTCACAGGTAGAATCTGT 509
||| || |||||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 546 AGTGAAGGAAAGCATTGATGTTAATGGGTTTCAAGTTCTTCCTTCACAGGTAGAATCTGT 605
Query 510 GAAGA-GTCTTTTTATAAAGCACCCAGACATTGCA-TCACAATTCC--GTCCAAAGAACC 565
|| || || |||||| ||| || |||||||||||| | | ||||| || ||||||||
Sbjct 606 GA-GACGTATTTTTAAAAAACATCCAGACATTGCAGT-AGGATTCCAAGT--AAAGAACC 661
Query 566 CACACCTGAG-AACAGCATACTTGAAT 591
||| ||||| || | ||| | |||||
Sbjct 662 AACATCTGAGGAAAA-CATTCATGAAT 687
> AT3G58220.2 | Symbols: | TRAF-like family protein | chr3:21564450-21566482
REVERSE LENGTH=1636
Length=1636
Score = 117 bits (63), Expect = 2e-25
Identities = 218/290 (75%), Gaps = 22/290 (8%)
Strand=Plus/Plus
Query 450 AGTAAATGAAAGCATCGATGTCAATGGGTTTCAAGTTCTTCCTTCACAGGTAGA-ATCT- 507
||| || |||| ||| ||| ||||||||||||||||||||||||||||||| || | ||
Sbjct 956 AGTGAAGGAAACCATGGATATCAATGGGTTTCAAGTTCTTCCTTCACAGGT-GACA-CTT 1013
Query 508 GTGAAGA-GTCTTTTTATAAAGCACCCAGACATTGCATCACAATTCCGTCCAAAGAACCC 566
|||| | || |||| | ||| ||||||||||||||| | |||| | |||||||||
Sbjct 1014 GTGA-GCCGTATTTTAAAAAAATACCCAGACATTGCATTAGGATTCAATGCAAAGAACCG 1072
Query 567 ACACCTGAGAACAGCATACTTGAATAG-CAT-ACTAAGCTTG-TCAGAGAGTCTGTGCCA 623
||| ||||| ||||||| | ||||| | | | | | ||| | || |||| ||||||||
Sbjct 1073 ACATCTGAGGACAGCATGCATGAAT-GTCCTCA-TCAGCCTAATC-GAGACACTGTGCCA 1129
Query 624 ATCCCC-CGAGGAACTCTCCA-ATGCTGATCTGGCT-AATGCATACTGTACACTAACT-T 679
|| || | |||| ||||| | | | ||| ||| | || ||| || | ||||| | |
Sbjct 1130 GTCACCAC-AGGAGCTCTC-AGACGAAGATATGGATGAA-GCAGACAATGCACTAG-TAT 1185
Query 680 GTGTGACAAAA-GCGGGGTTTAAATTGGATTGGTTGGAAAAGAAACTGAA 728
||| ||| | || || ||||| ||||||||||||| ||||| |||||
Sbjct 1186 ACGTG-CAAGATGCAGGCTTTAAGGTGGATTGGTTGGACAAGAAGCTGAA 1234
> AT3G58380.1 | Symbols: | TRAF-like family protein | chr3:21597799-21599568
REVERSE LENGTH=1236
Length=1236
Score = 110 bits (59), Expect = 3e-23
Identities = 95/112 (85%), Gaps = 4/112 (4%)
Strand=Plus/Plus
Query 458 AAAGCATCGATGTCAATGGGTTTCAAGTTCTTCCTTCACAGGTAGAATCTGTGAAGAGTC 517
||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 616 AAATCATTGATGTCAATGGGTTTCAAGTTCTTCCTTCACAGGTAGAATCTGTGAAGCGTA 675
Query 518 TTTTT-ATAA-AGCACCCAGACATTGCATCACAATTCCGTCCAAAGAACCCA 567
| ||| | || | ||||| ||||||||||| || ||| | ||| ||| |||
Sbjct 676 TATTTGA-AATAT-ACCCAAACATTGCATCAGAAGTCCCTTCAATGAAACCA 725
> AT3G44800.1 | Symbols: | Meprin and TRAF (MATH) homology domain-containing
protein | chr3:16343333-16346027 FORWARD LENGTH=1695
Length=1695
Score = 99.0 bits (53), Expect = 6e-20
Identities = 88/105 (84%), Gaps = 2/105 (2%)
Strand=Plus/Plus
Query 466 GATGTCAATGGGTTTCAAGTTCTTCCTTCACAGGTAGAATCTGTGAAGAGTCTTTTTATA 525
|||||||||||||||||||||||||||||||||| |||||||||||| || | || |
Sbjct 523 GATGTCAATGGGTTTCAAGTTCTTCCTTCACAGGCGGAATCTGTGAAGCGTATATTCG-A 581
Query 526 AAG-CACCCAGACATTGCATCACAATTCCGTCCAAAGAACCCACA 569
||| |||||| |||| |||| | | ||||| ||||||||| |||
Sbjct 582 AAGACACCCATACATGGCATTAGAGTTCCGAGCAAAGAACCAACA 626
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 40338020041
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5