BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg913433
Length=1488
Score E
Sequences producing significant alignments: (Bits) Value
AT1G35670.1 | Symbols: ATCDPK2, CPK11, ATCPK11, CDPK2 | calcium... 2471 0.0
AT4G09570.1 | Symbols: CPK4, ATCPK4 | calcium-dependent protein... 1779 0.0
AT2G17290.1 | Symbols: CPK6, ATCDPK3, ATCPK6 | Calcium-dependen... 409 5e-113
> AT1G35670.1 | Symbols: ATCDPK2, CPK11, ATCPK11, CDPK2 | calcium-dependent
protein kinase 2 | chr1:13205381-13208252 FORWARD
LENGTH=1757
Length=1757
Score = 2471 bits (1338), Expect = 0.0
Identities = 1438/1488 (97%), Gaps = 0/1488 (0%)
Strand=Plus/Plus
Query 1 ATGGAGTCGAAACCAAACCCTAGACGTCCTTCAAACACAGTTCTTCCATATCAAACACCA 60
|||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 76 ATGGAGACGAAGCCAAACCCTAGACGTCCTTCAAACACAGTTCTACCATATCAAACACCA 135
Query 61 CGATTACGAGATCATTACCTTCTCGGCAAAAAGCTAGGCCAAGGCCAATTCGGAACAACC 120
|||||| |||||||||||||||| || ||||||||||||||||||||||| |||||||||
Sbjct 136 CGATTAAGAGATCATTACCTTCTGGGAAAAAAGCTAGGCCAAGGCCAATTTGGAACAACC 195
Query 121 TATCTCTGCACAGAGAAATCAACCTCCGCTAATTACGCCTGCAAATCAATCCCCAAACGC 180
||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||
Sbjct 196 TATCTCTGCACAGAGAAATCAACCTCCGCTAATTACGCCTGCAAATCGATCCCGAAGCGA 255
Query 181 AAGCTCGTTTGTCGCGAGGATTACGAAGATGTATGGCGTGAGATTCAGATCATGCATCAT 240
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 256 AAGCTCGTGTGTCGCGAGGATTACGAAGATGTATGGCGTGAGATTCAGATCATGCATCAT 315
Query 241 CTCTCTGAGCATCCTAATGTTGTTCGGATCAAGGGGACTTATGAGGATTCGGTTTTTGTT 300
|||||||||||||| ||||||||| ||||||| ||||||||||| |||||||| ||||||
Sbjct 316 CTCTCTGAGCATCCAAATGTTGTTAGGATCAAAGGGACTTATGAAGATTCGGTGTTTGTT 375
Query 301 CATATTGTTATGGAGGTTTGTGAAGGTGGTGAGCTTTTTGATCGGATTGTTTCTAAAGGT 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 376 CATATTGTTATGGAGGTTTGTGAAGGTGGTGAGCTTTTTGATCGGATTGTTTCTAAAGGT 435
Query 361 CATTTTAGTGAGCGTGAGGCTGTGAAGCTTATTAAGACGATTCTTGGTGTTGTTGAGGCT 420
||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct 436 CATTTTAGTGAGCGTGAAGCTGTCAAGCTTATTAAGACGATTCTTGGTGTTGTTGAGGCT 495
Query 421 TGTCATTCTCTTGGTGTTATGCATAGAGATCTCAAACCTGAGAATTTCTTGTTTGATAGT 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 496 TGTCATTCTCTTGGTGTTATGCATAGAGATCTCAAACCTGAGAATTTCTTGTTTGATAGT 555
Query 481 CCTAAGGAAGATGCGAAACTCAAAGCTACCGATTTTGGTTTGTCTGTCTTCTATAAGCCA 540
||||| || ||||| || || || ||||||||||||||||||||||||||||||||||||
Sbjct 556 CCTAAAGATGATGCTAAGCTTAAGGCTACCGATTTTGGTTTGTCTGTCTTCTATAAGCCA 615
Query 541 GGACAATATTTATATGATGTGGTTGGAAGTCCATACTATGTTGCACCAGAGGTGCTAAAG 600
||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||
Sbjct 616 GGACAATATTTATATGACGTAGTTGGAAGTCCGTACTATGTTGCACCAGAGGTGCTAAAG 675
Query 601 AAATGTTATGGACCTGAAATAGATGTGTGGAGTGCCGGTGTTATCCTCTACATCTTACTC 660
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct 676 AAATGTTATGGACCTGAAATAGATGTGTGGAGTGCTGGTGTTATCCTCTACATTTTACTC 735
Query 661 AGCGGTGTTCCTCCCTTCTGGGCAGAGACCGAGTCTGGAATCTTTAGACAGATATTGCAA 720
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 736 AGCGGTGTTCCTCCCTTCTGGGCAGAGACTGAGTCTGGAATCTTTAGACAGATATTGCAA 795
Query 721 GGGAAGTTAGATTTCAAATCTGACCCATGGCCTAGTATCTCAGAAGCTGCTAAAGATTTG 780
|||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct 796 GGGAAGTTAGATTTCAAATCTGACCCGTGGCCTACTATCTCAGAAGCTGCTAAAGATTTG 855
Query 781 ATCTACAAAATGCTCGAAAGGAGCCCCAAGAAACGCATTTCTGCACATGAAGCCTTGTGT 840
||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 856 ATCTATAAAATGCTCGAAAGGAGCCCCAAGAAACGCATTTCTGCTCATGAAGCCTTGTGT 915
Query 841 CACCCATGGATTGTCGATGAACAAGCAGCACCAGACAAGCCTCTTGATCCAGCAGTCTTA 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 916 CACCCATGGATTGTCGATGAACAAGCAGCACCAGACAAGCCTCTTGATCCAGCAGTCTTA 975
Query 901 TCACGACTAAAGCAGTTTTCTCAAATGAATAAGATTAAGAAAATGGCCTTACGGGTAATT 960
|| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 976 TCTCGTCTAAAGCAGTTTTCTCAAATGAATAAGATTAAGAAAATGGCATTACGGGTAATT 1035
Query 961 GCTGAGAGACTTTCAGAGGAAGAAATTGGAGGTCTAAAGGAATTGTTCAAGATGATAGAC 1020
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1036 GCTGAGAGACTTTCAGAGGAAGAAATTGGAGGTCTGAAGGAATTGTTCAAGATGATAGAC 1095
Query 1021 ACAGACAACAGTGGCACGATAACTTTTGAAGAGCTCAAAGCGGGTTTGAAGAGAGTCGGA 1080
||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1096 ACAGACAACAGCGGAACGATTACTTTTGAAGAGCTCAAAGCGGGTTTGAAGAGAGTCGGA 1155
Query 1081 TCTGAACTGATGGAATCAGAAATCAAGTCTCTTATGGATGCGGCTGATATCGACAACAGT 1140
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1156 TCTGAACTGATGGAATCAGAAATCAAGTCTCTCATGGATGCGGCTGATATCGACAACAGT 1215
Query 1141 GGTACAATAGACTACGGAGAATTCCTAGCAGCAACATTACACATGAACAAGATGGAGAGA 1200
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1216 GGTACAATAGACTACGGAGAATTCCTAGCAGCAACCTTACACATGAACAAGATGGAGAGA 1275
Query 1201 GAGGAGAATCTGGTGGCTGCATTTTCATACTTTGACAAAGACGGAAGCGGTTATATCACC 1260
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1276 GAGGAGAATCTGGTGGCTGCATTTTCGTACTTTGACAAAGACGGAAGCGGTTATATCACC 1335
Query 1261 ATCGATGAGCTCCAGTCAGCTTGCACAGAGTTTGGTCTATGTGATACACCTCTGGACGAC 1320
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1336 ATCGATGAGCTTCAGTCAGCTTGCACAGAGTTTGGTCTATGTGATACACCTCTGGACGAC 1395
Query 1321 ATGATCAAGGAGATTGATCTTGACAATGACGGGAAGATCGATTTCTCGGAATTTACGGCA 1380
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct 1396 ATGATCAAGGAGATTGATCTTGACAATGACGGGAAGATCGATTTCTCGGAGTTTACAGCA 1455
Query 1381 ATGATGAGGAAAGGAGATGGAGTTGGGAGAAGCAGAACCATGATGAAAAACTTGAACTTC 1440
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1456 ATGATGAGGAAAGGAGATGGAGTTGGGAGAAGCAGAACCATGATGAAGAACTTGAACTTC 1515
Query 1441 AACATTGCTGATGCTTTTGGAGTTGATGGTCAAAAATCTGATGACTGA 1488
|||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1516 AACATTGCTGATGCTTTTGGAGTTGATGGTGAAAAATCTGATGACTGA 1563
> AT4G09570.1 | Symbols: CPK4, ATCPK4 | calcium-dependent protein
kinase 4 | chr4:6049517-6052335 FORWARD LENGTH=1700
Length=1700
Score = 1779 bits (963), Expect = 0.0
Identities = 1300/1465 (89%), Gaps = 14/1465 (1%)
Strand=Plus/Plus
Query 9 GAAACCAAACCCTAGACGTCCTTCAAACACAGTTCTTCCATATC-AAACACCACGATTAC 67
|||||||||||||||| | || ||||||| ||||||||||| | |||||||| |||||
Sbjct 49 GAAACCAAACCCTAGAAGACCCTCAAACAGTGTTCTTCCATA-CGAAACACCAAGATTAA 107
Query 68 GAGATCATTACCTTCTCGGCAAAAAGCTAGGCCAAGGCCAATTCGGAACAACCTATCTCT 127
||||||| || || ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 108 GAGATCACTATCTCCTCGGCAAAAAGCTAGGCCAAGGCCAATTTGGAACAACCTATCTCT 167
Query 128 GCACAGAGAAATCAACCTCCGCTAATTACGCCTGCAAATCAATCCCCAAACGCAAGCTCG 187
| |||||||||||| | || ||||||||||| |||||||||||||| ||||| ||||| |
Sbjct 168 GTACAGAGAAATCATCATCAGCTAATTACGCTTGCAAATCAATCCCAAAACGTAAGCTTG 227
Query 188 TTTGTCGCGAGGATTACGAAGATGTATGGCGTGAGATTCAGATCATGCATCATCTCTCTG 247
| ||||| || || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 228 TATGTCGTGAAGACTACGAAGATGTATGGCGTGAGATTCAGATCATGCATCATCTCTCTG 287
Query 248 AGCATCCTAATGTTGTTCGGATCAAGGGGACTTATGAGGATTCGGTTTTTGTTCATATTG 307
||||||||||||||||| | |||||||| |||||||| || || ||||||||||| ||||
Sbjct 288 AGCATCCTAATGTTGTTAGAATCAAGGGTACTTATGAAGACTCTGTTTTTGTTCACATTG 347
Query 308 TTATGGAGGTTTGTGAAGGTGGTGAGCTTTTTGATCGGATTGTTTCTAAAGG-TCATTTT 366
||||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct 348 TTATGGAAGTTTGTGAAGGTGGTGAGCTTTTTGATCGGATTGTTTCTAAAGGGTG-TTTT 406
Query 367 AGTGAGCGTGAGGCTG-TGAAGCTT-ATTAAGACGATTCTTGGTGTTGTTGAGGCTTGTC 424
||||| ||||| |||| | ||| || |||||||| |||||||||||||||||||||||||
Sbjct 407 AGTGAACGTGAAGCTGCT-AAG-TTGATTAAGACTATTCTTGGTGTTGTTGAGGCTTGTC 464
Query 425 ATTCTCTTGGTGTTATGCATAGAGATCTCAAACCTGAGAATTTCTTGTTTGATAGTCCTA 484
|||||||||||||||||||||||||||| || |||||||||||||||||||||||||| |
Sbjct 465 ATTCTCTTGGTGTTATGCATAGAGATCTTAAGCCTGAGAATTTCTTGTTTGATAGTCCCA 524
Query 485 AG-GAAGATGCGAAACTCAAAGCTACCGATTTTGGTTTGTCTGTCTTCTATAAGCCAGGA 543
| || ||||| || || |||||||| || |||||||||||||||||||| ||||||||
Sbjct 525 -GTGATGATGCTAAGCTTAAAGCTACAGACTTTGGTTTGTCTGTCTTCTACAAGCCAGGG 583
Query 544 CAATATTTATATGATGTGGTTGGAAGTCCATACTATGTTGCACCAGAGGTGCTAAAGAAA 603
|| ||| | |||||||| ||||||||||| || ||||||||||| ||||| || ||||||
Sbjct 584 CAGTATCTGTATGATGTAGTTGGAAGTCCGTATTATGTTGCACCTGAGGTTCTGAAGAAA 643
Query 604 TGTTATGGACCTGAAATAGATGTGTGGAGTGCCGGTGTTATCCTCTACATCTTACTCAGC 663
||||||||||| || ||||| |||||||| |||||||||||| | ||||||||||| ||
Sbjct 644 TGTTATGGACCAGAGATAGACGTGTGGAGCGCCGGTGTTATCTTGTACATCTTACTAAGT 703
Query 664 GGTGTTCCTCCCTTCTGGGCAGAGACCGAGTCTGGAATCTTTAGACAGATATTGCAAGGG 723
|| |||||||| || |||||||| |||||||| ||||||||||| |||||||||||||||
Sbjct 704 GGGGTTCCTCCTTTTTGGGCAGAAACCGAGTCAGGAATCTTTAGGCAGATATTGCAAGGG 763
Query 724 AAGTTAGATTTCAAATCTGACCCATGGCCTAGTATCTCAGAAGCTGCTAAAGATTTGATC 783
||| ||||||| |||||||| || ||||||| ||||||||||| |||||||||||||||
Sbjct 764 AAGATAGATTTTAAATCTGATCCGTGGCCTACTATCTCAGAAGGTGCTAAAGATTTGATT 823
Query 784 TACAAAATGCTCGAAAGGAGCCCCAAGAAACGCATTTCTGCACATGAAGCCTTGTGTCAC 843
|||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct 824 TACAAAATGCTCGATAGGAGCCCCAAGAAACGTATTTCTGCACATGAAGCATTGTGTCAC 883
Query 844 CCATGGATTGTCGATGAACAAGCAGCACCAGACAAGCCTCTTGATCCAGCAGTCTTATCA 903
|| |||||||| |||||||| || ||||||||||||||||| || ||||||||||| ||
Sbjct 884 CCTTGGATTGTTGATGAACATGCTGCACCAGACAAGCCTCTCGACCCAGCAGTCTTGTCG 943
Query 904 CGACTAAAGCAGTTTTCTCAAATGAATAAGATTAAGAAAATGGCCTTACGGGTAATTGCT 963
||||| |||||||| || ||||||||||| || ||||||||||||||||| ||||| ||
Sbjct 944 CGACTTAAGCAGTTCTCGCAAATGAATAAAATCAAGAAAATGGCCTTACGAGTAATCGCG 1003
Query 964 GAGAGACTTTCAGAGGAAGAAATTGGAGGTCTAAAGGAATTGTTCAAGATGATAGACACA 1023
|||||||| || |||||||| ||||| ||||| |||||||||||||| |||||||| |||
Sbjct 1004 GAGAGACTCTCGGAGGAAGAGATTGGTGGTCTGAAGGAATTGTTCAAAATGATAGATACA 1063
Query 1024 GACAACAGTGGCACGATAACTTTTGAAGAGCTCAAAGCGGGTTTGAAGAGAGTCGGATCT 1083
||||||||||| || || || ||||||||||| ||||| ||| | |||||||| ||||||
Sbjct 1064 GACAACAGTGGAACAATCACCTTTGAAGAGCTTAAAGCAGGTCTAAAGAGAGTTGGATCT 1123
Query 1084 GAACTGATGGAATCAGAAATCAAGTCTCTTATGGATGCGGCTGATATCGACAACAGTGGT 1143
||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 1124 GAATTGATGGAATCAGAAATCAAGTCTCTTATGGATGCGGCGGATATAGACAACAGTGGG 1183
Query 1144 ACAATAGACTACGGAGAATTCCTAGCAGCAACATTACACATGAACAAGATGGAGAGAGAG 1203
|||||||||||||| |||||||||||||| |||||||| || |||||||||||||||||
Sbjct 1184 ACAATAGACTACGGTGAATTCCTAGCAGCGACATTACATATAAACAAGATGGAGAGAGAA 1243
Query 1204 GAGAATCT-GGTGGCTGCATTTTCATACTTTGACAAAGACGGAAGCGGTTATATCACCAT 1262
||||| || ||||| ||| |||||||||||||| ||||| || |||||||||||||||||
Sbjct 1244 GAGAA-CTTGGTGGTTGCGTTTTCATACTTTGATAAAGATGGTAGCGGTTATATCACCAT 1302
Query 1263 CGATGAGCTCCAGTCA-GCTTGCACAGAGTTTGGTCTATGTGATACACCTCTGGACGACA 1321
|| ||||| || || || ||||||||||||||||| ||||| || ||||| || ||||
Sbjct 1303 TGACGAGCTTCAA-CAAGCCTGCACAGAGTTTGGTCTCTGTGACACTCCTCTTGATGACA 1361
Query 1322 TGATCAAGGAGATTGATCTTGACAATGACGGGAAGATCGATTTCTCGGAATTTACGGCAA 1381
||||||| |||||||||||||| |||||||||||||| |||||||| || ||||| || |
Sbjct 1362 TGATCAAAGAGATTGATCTTGATAATGACGGGAAGATTGATTTCTCAGAGTTTACTGCTA 1421
Query 1382 TGATGAGGAAAGGAGATGGAGTTGGGAGAAGCAGAACCATGATGAAAAACTTGAACTTCA 1441
|||||| |||||||||||| |||||||| |||||||| |||| ||| |||||||||||||
Sbjct 1422 TGATGAAGAAAGGAGATGGTGTTGGGAGGAGCAGAACTATGAGGAACAACTTGAACTTCA 1481
Query 1442 ACATTGCTGATGCTTTTGGAGTTGA 1466
| || ||||| ||||||||||||||
Sbjct 1482 ATATAGCTGAAGCTTTTGGAGTTGA 1506
> AT2G17290.1 | Symbols: CPK6, ATCDPK3, ATCPK6 | Calcium-dependent
protein kinase family protein | chr2:7516415-7519633 FORWARD
LENGTH=2332
Length=2332
Score = 409 bits (221), Expect = 5e-113
Identities = 826/1103 (75%), Gaps = 102/1103 (9%)
Strand=Plus/Plus
Query 220 GAGATTCAGATCATGCATCATCTCTCTGAG-CATC-CTAATGTTGTT-CGGA-TCAAGGG 275
||||||||||| ||||||||| | ||| | || | ||| ||||| | | | ||||
Sbjct 700 GAGATTCAGATTATGCATCATTTAGCTG-GTCA-CAAGAATATTGTTAC-TATTAAAGGA 756
Query 276 GACTTATGAGGATTCGGTTT-T-TGTTCATATTGTTATGGAGGTTTGTGAAGGTGGTGAG 333
| |||||||||| || ||| | |||||| ||||| |||||| |||||| |||||||||
Sbjct 757 G-CTTATGAGGA-TC-CTTTGTATGTTCACATTGTGATGGAGCTTTGTGCTGGTGGTGAG 813
Query 334 CTT-TTTGATCGGATTGTTTC-TAAAGGTCATTTTAGTGAGCGTG-AGGCTG-TGAAGCT 389
|| |||||| ||||| ||| || |||||||| || ||| | | | |||| || || |
Sbjct 814 -TTGTTTGATAGGATT-ATTCATAGAGGTCATTACAGCGAGAG-GAAAGCTGCTG-AG-T 868
Query 390 T-ATTAAGA-CGATTCTTGGTGTTGTTGAGGCTTGTCATTCTCTTGGTGTTATGCATAGA 447
| | |||| | ||| | |||||||||||||| |||||||||||||||||||||||||||
Sbjct 869 TGACCAAGATC-ATTGTCGGTGTTGTTGAGGCGTGTCATTCTCTTGGTGTTATGCATAGA 927
Query 448 GATCTCAAA-CCTGAGAATTTCTTGTTTGATAGTCCTAAGGAAGATGCGAAA-CTCA-AA 504
||| | ||| ||||||||||||||||| | || | ||||| |||| ||| ||
Sbjct 928 GATTT-AAAGCCTGAGAATTTCTTGTTGGTTAAT---AAGGATGATGATTTCTCTCTTAA 983
Query 505 G-CTACCGATTTTGGTTTGTCTGTCTTCTAT-AAGCCAGGACAA-TATTTATATGATGTG 561
| | | ||||||||| | ||||| |||| | || ||||| ||| |||| | | |||||
Sbjct 984 GGCCATTGATTTTGGTCTCTCTGTTTTCT-TCAAACCAGGCCAAATATTCA-AGGATGTT 1041
Query 562 GTTGGAAGTCCATACTATGTTGCACCAGAGGTGCTAA-AGAAATGTTATGGACCTGAAA- 619
||||||||||||||||||||||| || ||||| || | ||| |||||| || |||
Sbjct 1042 GTTGGAAGTCCATACTATGTTGCTCCTGAGGTTCTTCTA-AAACATTATGGTCCAGAAGC 1100
Query 620 TAGATGTGTGGAGTGCCGGTGTTATCCTCTACATCTTACTCAGCGGTGTTCCTCCCTTCT 679
| |||||||||| ||| |||||||| ||||| |||||||| || ||||| || || ||||
Sbjct 1101 T-GATGTGTGGACTGCTGGTGTTATACTCTATATCTTACTAAGTGGTGTCCCGCCTTTCT 1159
Query 680 GGGCAGAGAC-CGAGTCT-GGAATCTTT-A-GACAGATATTGCAAGGGA-AG-TTAGA-T 732
||||||| || | || | ||||| ||| | | | | | ||| |||||| | || || |
Sbjct 1160 GGGCAGAAACAC-AG-CAAGGAATATTTGATG-CTG-TGTTG-AAGGGATATATT-GACT 1213
Query 733 TTCAAATCTGACCCATGGCCTAGT-ATCTCAGA-AGCTGCTAAAGATTTGATCTACAAAA 790
|| | | | ||||| |||||| || || || || || |||||||||| ||||| || |
Sbjct 1214 TTGATA-CAGACCCGTGGCCT-GTCATATCCGACAG-TGCTAAAGATCTGATCCGGAAGA 1270
Query 791 TGCTC-GAAAGGAGCCC--CAAGAAACGCATTT--CTGCACATGAAGCCTTGTGTCACCC 845
|| | | || || | ||| || ||| |||| ||||||| |||| |||| ||
Sbjct 1271 TGTTATGCTCT-AGTCCTTCT-GAA-CG--TTTGACTGCTCATGAAGTCTTGCGTCATCC 1325
Query 846 ATGGAT-TGTCGATGAACA-AGCAGCACCAGACA-AGCCTCTTGATCCAGCAGTCTTATC 902
|||||| ||| || ||| || ||||| || | ||| ||||| || || || || ||
Sbjct 1326 ATGGATCTGT-GA-GAATGGAGTTGCACCGGATAGAGCA-CTTGACCCGGCTGTTTTGTC 1382
Query 903 ACGACTAAAGCAGTTTTCT-CAAATGAATAAGATTAA-GAAAATGGCCTTACGGGTAATT 960
|| ||||| ||||||||| ||| ||||||| ||||| ||| ||||| ||| ||| ||
Sbjct 1383 TCGTCTAAAACAGTTTTCTGCAA-TGAATAA-ATTAAAGAAGATGGCTTTAAAGGTGATA 1440
Query 961 GCTGAGAGACTTTCAGAGGAAGAAATTG-GAGGTCTAA-AGGAATTGTTCAAGATGATAG 1018
|||||||| || ||||| ||||| |||| | ||| ||| || ||| ||| || || |
Sbjct 1441 GCTGAGAGCCTCTCAGAAGAAGAGATTGCG-GGTTTAAGAGCAAT-GTTTGAGGCAATGG 1498
Query 1019 ACACAGACAACAGTGGCACGATAACTTTTGAAGAGCTCAAAGCGGGTTTGA-A-GAGAGT 1076
| || || ||||| || | || |||||||| || |||||||| || |||| | || | |
Sbjct 1499 ATACTGATAACAGCGGTGCAATCACTTTTGATGAACTCAAAGCTGGCTTGAGAAGATA-T 1557
Query 1077 CGGATCTGAAC-T-GATGGA-ATCAGAAATCA-AGTCTCTTATGGATGCGGCTGATATCG 1132
||||| ||| | || || | | || ||| || ||||||||| ||||||||| | |
Sbjct 1558 -GGATC--AACCTTGAAAGACACC-GAGATCCGAGA-TCTTATGGAAGCGGCTGATGTGG 1612
Query 1133 ACAACAGTGGTACAATAGACTACGGAGAATTCCTAGCAGCAAC-ATTACA-CATGAACAA 1190
||||||| ||||||||||| ||| | || || | ||||| || || || | |||| ||
Sbjct 1613 ACAACAGCGGTACAATAGATTACAGCGAGTTTATTGCAGCGACGATC-CATC-TGAATAA 1670
Query 1191 GA-TGGAGAGAGAGGAGAATCTGGTGGCTGCATTTTCA-TACTTTGACAAAGACGGAAGC 1248
| | |||||||| ||| |||| || |||||||| || |||||||||||||| |||||
Sbjct 1671 -ACTAGAGAGAGAAGAGCATCTTGTCTCTGCATTT-CAGTACTTTGACAAAGATGGAAGT 1728
Query 1249 GGTTATATCACCATCGATGAGCT 1271
||||| |||||||| ||||||||
Sbjct 1729 GGTTACATCACCATTGATGAGCT 1751
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 73393196790
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5