BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg913495
Length=1890
Score E
Sequences producing significant alignments: (Bits) Value
AT1G35540.1 | Symbols: ARF14 | auxin response factor 14 | chr1:... 937 0.0
AT1G34390.1 | Symbols: ARF22 | auxin response factor 22 | chr1:... 920 0.0
AT1G34310.1 | Symbols: ARF12 | auxin response factor 12 | chr1:... 915 0.0
AT1G34410.1 | Symbols: ARF21 | auxin response factor 21 | chr1:... 915 0.0
AT1G35240.1 | Symbols: ARF20 | auxin response factor 20 | chr1:... 896 0.0
AT1G35520.1 | Symbols: ARF15 | auxin response factor 15 | chr1:... 856 0.0
> AT1G35540.1 | Symbols: ARF14 | auxin response factor 14 | chr1:13108634-13111700
FORWARD LENGTH=1818
Length=1818
Score = 937 bits (507), Expect = 0.0
Identities = 681/765 (89%), Gaps = 12/765 (2%)
Strand=Plus/Plus
Query 243 tcGTGTTATTGCTATTCAGCTTAAAGTGGaaaaaaaTAGTGATGAGACTTATGCTGAGAT 302
|||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||
Sbjct 240 TCGTGTTATTGCTATTCAACTTAAGGTGGAAAACAATAGTGATGAGACTTATGCTGAGAT 299
Query 303 CACTTTGATGCCATATACAACTCAAGTGGTAATCCATAATCAGAATGATAATCA-TTATA 361
||||||||||||| ||||||||||||| ||||||| || ||||||| | ||||| || ||
Sbjct 300 CACTTTGATGCCAGATACAACTCAAGTTGTAATCCCTACTCAGAATCAAAATCAATT-TA 358
Query 362 GGCCATCGGTTAATTCATTTACAAAGGTTTTAACGGCCTCAGATACAAGCGCCCATGGTG 421
|||||| |||||||| ||||| |||||||||||||||||||||||||||| |||||||
Sbjct 359 GGCCATTAGTTAATTCCTTTACGAAGGTTTTAACGGCCTCAGATACAAGCGTTCATGGTG 418
Query 422 GATTCTCTGTTCCGAGAAAACATGCTATTGAATGTCTCCCTCCTCTGAATATGTCTGAGC 481
||||||||||||||| ||||||||| ||||||||||||||||| ||| ||||||| |||
Sbjct 419 GATTCTCTGTTCCGAAAAAACATGCCATTGAATGTCTCCCTCCGCTGGATATGTCACAGC 478
Query 482 CTCTACCGGCACAAGAACTTCTTACTACAGATCTCCAAGGGAATCAATGGAGATTCAAAC 541
|||||||| |||||||| ||||| ||| |||||| || || |||||||||||||||| ||
Sbjct 479 CTCTACCGACACAAGAAATTCTTGCTATAGATCTTCATGGTAATCAATGGAGATTCAGAC 538
Query 542 ACAGCTACAGAGGTACACCGCCAAGACATTTGATAACAACAGGTTGGAACGCATTCACAA 601
||| ||| ||||||||| ||| |||||||||| |||||| |||||||| ||||||||||
Sbjct 539 ACATCTATAGAGGTACAGCGCAAAGACATTTGTTAACAATTGGTTGGAATGCATTCACAA 598
Query 602 CATCaaaaaaaTTGGTTGCAGGGGATGTTATTGTATTCCTTAGGGGAGAGTGTGGAGAGT 661
|||||||||||||||||| ||| ||||||||||||||| ||||||||||| ||||||||
Sbjct 599 CATCAAAAAAATTGGTTGAAGGAGATGTTATTGTATTCGTTAGGGGAGAGACTGGAGAGT 658
Query 662 TACGAGTTGGTATCAGACGGGCAGGGCATCAACAAGGGAACAGACCTTCATCACTAATAT 721
||||||||||||||||||| ||||| |||||||||||||| | |||||||||| || |||
Sbjct 659 TACGAGTTGGTATCAGACGAGCAGGACATCAACAAGGGAATATACCTTCATCAATAGTAT 718
Query 722 CAATAGATAGTATGGGACATGG-AGTAATTGCTTCTGCAGTGCATGCTTTTGATAACCAA 780
||||||| |||||| ||||||| | |||||||||||||| |||||||||||||||||||
Sbjct 719 CAATAGAAAGTATGAGACATGGGA-TAATTGCTTCTGCAAAGCATGCTTTTGATAACCAA 777
Query 781 TGTATGTTTATTGTGGTTTGTAAGCCAAGTATCAGGTCAAGTCAATTTATTGTCAGTTAC 840
|||||||| |||||||||| |||||||| | ||||||||||||||||||||||||
Sbjct 778 TGTATGTTCATTGTGGTTTACAAGCCAAG-----G-TCAAGTCAATTTATTGTCAGTTAC 831
Query 841 GACAAATTCTTAGACGCAGTGAACAAGAAGTTCAATGTCGGTTCAAGATTTACAATGCGA 900
|||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct 832 GACAAATTCTTAGACGTTGTGAACAATAAGTTCAATGTCGGTTCAAGATTTACAATGCGG 891
Query 901 TTTGAAGGTGATGATTTATCTGAAAGAAGATATTCTGGAACAATTATTGGAGTTAAAGAT 960
||||| ||||||||||| ||||||||||||| || ||| |||||||||||||||| |||
Sbjct 892 TTTGAGGGTGATGATTTCTCTGAAAGAAGATCTTTTGGGACAATTATTGGAGTTAGTGAT 951
Query 961 TTCTCCCCTCATTGGATCGAAT-CAGAATGGCGAAGCTTAGAAGT 1004
||||| |||||||||| | | |||| ||||| |||||||||||
Sbjct 952 TTCTCTCCTCATTGGAA-GTGTTCAGAGTGGCGCAGCTTAGAAGT 995
Score = 826 bits (447), Expect = 0.0
Identities = 727/856 (85%), Gaps = 44/856 (5%)
Strand=Plus/Plus
Query 1041 AGTGAAGTGGGATGAATTTGCATCATTTCCAAGACCTGATAAAGTTTCCCCATGGGAAAT 1100
|||| ||||||||||||||||||||||||| ||||| | ||||||| |||||||| ||
Sbjct 993 AGTGCAGTGGGATGAATTTGCATCATTTCCGAGACCAAACCAAGTTTCACCATGGGACAT 1052
Query 1101 CGAACATTTAACTCCTTTGTCAAATGTTCTCC-GGTCATCTTTGCTCAAGAACAAGCGTT 1159
|||||||||||| |||| |||||||||| ||| |||||||||| ||||||||||||||||
Sbjct 1053 CGAACATTTAACGCCTTGGTCAAATGTT-TCCAGGTCATCTTTTCTCAAGAACAAGCGTT 1111
Query 1160 CCCGAGAAGTTAATGAAATCGGTTCAACATCATCACATCTCTTGCCTCCTATATCGACAC 1219
| ||||||||||||||||||||||| | |||||||||||||||||||||| || |||||
Sbjct 1112 CACGAGAAGTTAATGAAATCGGTTCTTCCTCATCACATCTCTTGCCTCCTACATTGACAC 1171
Query 1220 AA-GATCAAGAAATTGGACAACCAAGCATGATCTA-TCCGATGAAT-GTTCTTCCTAGTT 1276
|| || |||||||||||||||| ||||||| | | ||||||||| ||| || | |||
Sbjct 1172 AAGGA-CAAGAAATTGGACAACAAAGCATG-GCCACCCCGATGAATATTTC-TCTTCGTT 1228
Query 1277 ATCGTGATGCAACAGAAGATGCTGA-GATTCCTTCTAGGTTGCTAATTAGCTACCCTGTC 1335
|||||||| || ||||||||| | || ||||||||| |||||||| |||||||||||
Sbjct 1229 ATCGTGATATTACTGAAGATGCT-ATGACTCCTTCTAGATTGCTAATGAGCTACCCTGT- 1286
Query 1336 CCAA-CAATGCCCAAACTAACTTACAATAACAATCAAATGGTTACACCACTAGaaaaaaa 1394
|||| ||||| ||||||||| ||||||| ||| ||||||||||| ||||| ||||
Sbjct 1287 CCAACCAATGGCCAAACTAAATTACAAT---AAT---GTGGTTACACCAATAGAAGAAAA 1340
Query 1395 TATAACAACCAATGCCAG-CGCCAGTTGTAGACTGTTTGGAGTCTCTCTTGCCACTCCTT 1453
|||||||||||||| ||| ||| |||| ||| |||||||||||||||| ||||||||||
Sbjct 1341 TATAACAACCAATG-CAGTCGCTAGTTTTAGGTTGTTTGGAGTCTCTCTGGCCACTCCTT 1399
Query 1454 CAGAGATCAAAGATCCCATTGACCAACAAGACTCATATCAGATATCTGAGATTTCTAAAC 1513
| | ||||||||||||| ||| ||| | | || | | | | |||||||||| ||
Sbjct 1400 CGGTGATCAAAGATCCCGTTG---AAC-A-A---AT-T-GGCT-T-GGAGATTTCTAGAC 1447
Query 1514 TCT-CTCAAGAGAAAAAGTTTGGTCTTGGTCAAACTTTAACATCTGCAAGAGAGATCCAA 1572
| | |||| || ||||||||||||| | |||| ||| | ||| ||| ||||||||||
Sbjct 1448 T-TACTCAGGAAAAAAAGTTTGGTCAAAGCCAAATTTTGAGATCACCAACAGAGATCCAA 1506
Query 1573 AGCAAGCAGTTAAGTTCTACTAGAAGC-TGTACCAAAGTTCAAATGGAAGGTGTAACAGT 1631
||||||||||| |||||||| |||| | |||||||||||||||||| ||||||||||| |
Sbjct 1507 AGCAAGCAGTTCAGTTCTACCAGAA-CTTGTACCAAAGTTCAAATGCAAGGTGTAACAAT 1565
Query 1632 AGGAAGAGCTTTGGATTTAAGTGTTCTTAATGGATATGATCAACTAATACTAGAATTGGA 1691
|||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1566 AGGAAGAGCTGTGGATTTAAGTGTTCTTAATGGATATGATCAGTTAATACTAGAATTGGA 1625
Query 1692 GAAACTCTTTGATCTCAACGGCCAGTTGCAAACCCGCAACCAATGGGAAATAAG-TTTCA 1750
||| ||||| |||||||| ||||| |||||| | ||||||||||||||||| || |||||
Sbjct 1626 GAAGCTCTTCGATCTCAAAGGCCAATTGCAAGCTCGCAACCAATGGGAAAT-AGCTTTCA 1684
Query 1751 TAGACAATGAAGGA-GATAAGATGTTTGTTGGAGATGATCCATGGCCTGAATTCTGCAAC 1809
| | |||||| || ||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct 1685 CAAATAATGAA-GAGGATAAGATGCTTGTTGGAGAAGATCCATGGCCTGAATTCTGCAAC 1743
Query 1810 ATGGTGAAGAGGATTAT-CATATATACAAAAGAGAAGGTCAAAAACTTAAAGTCC-G-AA 1866
|||||||||| ||| || ||||||| |||||||| ||||||||||||| |||||| | ||
Sbjct 1744 ATGGTGAAGAAGAT-ATTCATATATTCAAAAGAGGAGGTCAAAAACTTGAAGTCCAGGAA 1802
Query 1867 CAATCTCTCAAATTGA 1882
| |||||||| ||||
Sbjct 1803 GAGTCTCTCAAGTTGA 1818
> AT1G34390.1 | Symbols: ARF22 | auxin response factor 22 | chr1:12556005-12559082
FORWARD LENGTH=1797
Length=1797
Score = 920 bits (498), Expect = 0.0
Identities = 679/765 (89%), Gaps = 18/765 (2%)
Strand=Plus/Plus
Query 243 tcGTGTTATTGCTATTCAGCTTAAAGTGGaaaaaaaTAGTGATGAGACTTATGCTGAGAT 302
|||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||
Sbjct 240 TCGTGTTATTGCTATTCAACTTAAGGTGGAAAACAATAGTGATGAGACTTATGCTGAGAT 299
Query 303 CACTTTGATGCCATATACAACTCAAGTGGTAATCCATAATCAGAATGATAATC-ATTATA 361
||||||||||||| ||||||||||||| ||||||| || ||| ||||| |||| ||| ||
Sbjct 300 CACTTTGATGCCAGATACAACTCAAGTTGTAATCCCTACTCAAAATGAAAATCAATT-TA 358
Query 362 GGCCATCGGTTAATTCATTTACAAAGGTTTTAACGGCCTCAGATACAAGCGCCCATGGTG 421
| |||| |||||||| ||||| ||||||||||||||||| ||||||| | | ||||
Sbjct 359 GACCATTAGTTAATTCCTTTACGAAGGTTTTAACGGCCTCGGATACAA--G--C--GGTG 412
Query 422 GATTCTCTGTTCCGAGAAAACATGCTATTGAATGTCTCCCTCCTCTGAATATGTCTGAGC 481
|||||| |||||| | ||||||||| ||||||||||| ||||| ||| |||||||| |||
Sbjct 413 GATTCTTTGTTCCAAAAAAACATGCCATTGAATGTCTTCCTCCCCTGGATATGTCTCAGC 472
Query 482 CTCTACCGGCACAAGAACTTCTTACTACAGATCTCCAAGGGAATCAATGGAGATTCAAAC 541
|||||||| |||||||||||||| ||||||||||||| || ||||||||||||||||| |
Sbjct 473 CTCTACCGACACAAGAACTTCTTGCTACAGATCTCCATGGTAATCAATGGAGATTCAACC 532
Query 542 ACAGCTACAGAGGTACACCGCCAAGACATTTGATAACAACAGGTTGGAACGCATTCACAA 601
||| ||| ||||||||||||| |||||||||| ||||||| |||||||| ||||||||||
Sbjct 533 ACAACTATAGAGGTACACCGCAAAGACATTTGTTAACAACTGGTTGGAATGCATTCACAA 592
Query 602 CATCaaaaaaaTTGGTTGCAGGGGATGTTATTGTATTCCTTAGGGGAGAGTGTGGAGAGT 661
|||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 593 CATCAAAAAAATTGGTTGCAGGGGATGTTATTGTATTCGTTAGGGGAGAGACTGGAGAGT 652
Query 662 TACGAGTTGGTATCAGACGGGCAGGGCATCAACAAGGGAACAGACCTTCATCACTAATAT 721
||||||||||||||||||| ||||| |||||||||||||| | |||||||||| ||||||
Sbjct 653 TACGAGTTGGTATCAGACGAGCAGGACATCAACAAGGGAATATACCTTCATCAATAATAT 712
Query 722 CAATAGATAGTATGGGACATGGAGTAATTGCTTCTGCAGTGCATGCTTTTGATAACCAAT 781
||||||| |||||| ||||||| || |||||||| ||| ||||||||||||||||||||
Sbjct 713 CAATAGAAAGTATGAGACATGGGGTGATTGCTTCCGCAAAGCATGCTTTTGATAACCAAT 772
Query 782 GTATGTTTATTGTGGTTTGTAAGCCAAGTATCAGGTCAAGTCAATTTATTGTCAGTTACG 841
||||||| |||||||||| |||||||| |||| | |||||||||||||||||||||
Sbjct 773 GTATGTTCATTGTGGTTTACAAGCCAAG-ATCA----A-GTCAATTTATTGTCAGTTACG 826
Query 842 ACAAATTCTTAGACGCAGTGAACAAGAAGTTCAATGTCGGTTCAAGATTTACAATGCGAT 901
||||||||||||| || |||||||| ||||||||||| |||||||||||||||||||| |
Sbjct 827 ACAAATTCTTAGATGCTGTGAACAATAAGTTCAATGTTGGTTCAAGATTTACAATGCGGT 886
Query 902 TTGAAGGTGATGATTTATCTGAAAGAAGATATTCTGGAACAATTATTGGAGTTAAAGATT 961
|||| ||||||||||| |||||||||||||||| ||| |||||||||||||||| ||||
Sbjct 887 TTGAGGGTGATGATTTCTCTGAAAGAAGATATTTTGGGACAATTATTGGAGTTAGTGATT 946
Query 962 TCTCCCCTCATTGGATCGAAT-CAGAATGGCG-AAGCTTAGAAGT 1004
|||| |||||||||| | | |||| ||||| || |||||||||
Sbjct 947 TCTCTCCTCATTGGAA-GTGTTCAGAGTGGCGCAA-CTTAGAAGT 989
Score = 773 bits (418), Expect = 0.0
Identities = 706/838 (84%), Gaps = 47/838 (6%)
Strand=Plus/Plus
Query 1041 AGTGAAGTGGGATGAATTTGCATCATTTCCAAGACCTGATAAAGTTTC-CCCATGGGAAA 1099
|||| ||||||||||||||||||||||| | |||||| ||||||| || ||| ||||| |
Sbjct 987 AGTGCAGTGGGATGAATTTGCATCATTTTCGAGACCTAATAAAGTGTCACCC-TGGGAGA 1045
Query 1100 TCGAACATTTAACT-CCTTTGTCAAATGTTCTC-CGGTCATCTTTGCTCAAGAACAAGCG 1157
|||||||||||| | ||| || |||||||| | || ||||||||||||||||||||||
Sbjct 1046 TCGAACATTTAA-TGCCTGCGTTAAATGTTC-CGCGACCATCTTTGCTCAAGAACAAGCG 1103
Query 1158 TTCCCGAGAAGTTAATGAAATCGGTTCAACATCATCACATCTCTTGCCTCCTATATCGAC 1217
|| ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct 1104 TTTACGAGAAGTTAATGAAATCGGTTCTTCATCATCACATCTCTTGCCTCCTATATTGAC 1163
Query 1218 ACAA-GATCAAGAAATTGGACAACCAAGCATGATCTATCCGATGAATGTTCTTC-CT-AG 1274
|||| || ||||||||||| |||| |||| || || ||||||||| | ||| || |
Sbjct 1164 ACAAGGA-CAAGAAATTGGCCAACTAAGCGTGGCCTCCCCGATGAAT-AT-TTCTCTCAC 1220
Query 1275 TTATCGTGATGCAACAGAAGATGCTGA-GATTCCTTCTAGGTTGCTAATTAGCTACCCTG 1333
|||||||||| |||| ||||||| | | || ||||||||| |||||||| ||||||||||
Sbjct 1221 TTATCGTGATACAACTGAAGATG-TTATGAATCCTTCTAGATTGCTAATGAGCTACCCTG 1279
Query 1334 TCCCAA-CAATGCCCAAACTAACTTACAATAACAATCAAATGGTTACACCACTAGaaaaa 1392
| |||| ||||||||||||||| |||||||||| ||||||||||||| | ||||| ||
Sbjct 1280 T-CCAACCAATGCCCAAACTAAATTACAATAAC---CAAATGGTTACACAAATAGAAGAA 1335
Query 1393 aaTATAACAACCAATG-CCAGCGCCAGTTGTAGACTGTTTGGAGTCTCTCTTGCCACTCC 1451
|||||||||||||| | | || | | || ||| |||||||||||||| || | ||||||
Sbjct 1336 AATATAACAACCAA-GACTGGCACTAATTTTAGGCTGTTTGGAGTCTCACTGGTCACTCC 1394
Query 1452 TTCAGAGATCAAAGATCCCATTGACCAACAAGACTCATATCAGATATCTGAGATTTCTAA 1511
||||| ||||||||||||||||| |||| | || | || |||||||| ||
Sbjct 1395 TTCAGTGATCAAAGATCCCATTG------AAGA---A-AT-TG-GCTCGGAGATTTCGAA 1442
Query 1512 ACTCT-CTCAA-GAGAAAAAGTTTGGTCTTGGTCAAACTTTAACATCTGCAAGAGAGATC 1569
||| | || || || ||||||||||||| | |||||||| | ||| ||| |||||||
Sbjct 1443 ACT-TACTGAAGGA-AAAAAGTTTGGTCAAAGCCAAACTTTGAGATCACCAACAGAGATC 1500
Query 1570 CAAAGCAAGCAGTTAAGTTCTACTAGAAGC-TGTACCAAAGTTCAAATGGAAGGTGTAAC 1628
|||||||||||||| ||||||||||||| | |||||||||||||||||| ||||||||||
Sbjct 1501 CAAAGCAAGCAGTTCAGTTCTACTAGAA-CTTGTACCAAAGTTCAAATGCAAGGTGTAAC 1559
Query 1629 AGTAGGAAGAGCTTTGGATTTAAGTGTTCTTAATGGATATGATCAACTAATACTAGAATT 1688
| ||| ||||||| |||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct 1560 AATAGAAAGAGCTGTGGATTTAAGTGTTCTGAATGGATATGATCAGCTAATACTAGAATT 1619
Query 1689 GGAGAAACTCTTTGATCTCAACGGCCAGTTGCAAACCCGCAACCAATGGGAAATAAG-TT 1747
|||| | ||||| |||||||| ||||| || ||||| ||||||||||||||||| || ||
Sbjct 1620 GGAGGAGCTCTTCGATCTCAAAGGCCAATTACAAACTCGCAACCAATGGGAAAT-AGCTT 1678
Query 1748 TCATAGACAATGAAGGA-GATAAGATGTTTGTTGGAGATGATCCATGGCCTGAATTCTGC 1806
||| ||| | || | || ||||||||| |||||||||| |||||||||||||||||||||
Sbjct 1679 TCACAGATAGTG-ACGATGATAAGATGCTTGTTGGAGACGATCCATGGCCTGAATTCTGC 1737
Query 1807 AACATGGTGAAGAGGATTATC-ATATATACAAAAGAGAAGGTCAAAAACTTAAAGTCC 1863
||||||||||||| ||| || |||| | |||||||| ||||||||||||| ||||||
Sbjct 1738 AACATGGTGAAGAAGAT-ATTGATAT-T-CAAAAGAGGAGGTCAAAAACTTGAAGTCC 1792
Score = 191 bits (103), Expect = 2e-47
Identities = 148/169 (88%), Gaps = 5/169 (3%)
Strand=Plus/Plus
Query 1 ATGGAAAGTGGCAGTGTTGTGAATGCACAACCTGAATTATCAGGCATAACAGTTGATGAA 60
||||||||||||| ||||||||||||||||||||||||||||||| | | |||||| |
Sbjct 1 ATGGAAAGTGGCAACATTGTGAATGCACAACCTGAATTATCAGGCAT-A-A-TTGATGGA 57
Query 61 TCTAAAAGTTATATGTACGAGCAGTTATGGAAATTGTGTGCTGGACCTTTATATGATATT 120
|| || ||||||||||||||||||||||||||| | ||||| || ||||| | |||||||
Sbjct 58 TCCAAGAGTTATATGTACGAGCAGTTATGGAAACTCTGTGCGGGGCCTTTGTGTGATATT 117
Query 121 CCAAAAGTTGGAGAAAA-AGTTTACTACTTTCCTCAAGGCCACATAGAG 168
|||||| |||||||||| | |||| ||||||||||||||| | ||||||
Sbjct 118 CCAAAACTTGGAGAAAAGA-TTTATTACTTTCCTCAAGGCAATATAGAG 165
> AT1G34310.1 | Symbols: ARF12 | auxin response factor 12 | chr1:12508548-12511520
REVERSE LENGTH=1782
Length=1782
Score = 915 bits (495), Expect = 0.0
Identities = 677/765 (88%), Gaps = 12/765 (2%)
Strand=Plus/Plus
Query 243 tcGTGTTATTGCTATTCAGCTTAAAGTGGaaaaaaaTAGTGATGAGACTTATGCTGAGAT 302
|||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||
Sbjct 240 TCGTGTTATTGCTATTCATCTTAAGGTGGAAAACAATAGTGATGAGACTTATGCTGAGAT 299
Query 303 CACTTTGATGCCATATACAACTCAAGTGGTAATCCATAATCAGAATGATAATCA-TTATA 361
||||||||||||| ||||||||||||| ||||||| || ||||||||| ||||| || ||
Sbjct 300 CACTTTGATGCCAGATACAACTCAAGTTGTAATCCCTACTCAGAATGAAAATCAATT-TA 358
Query 362 GGCCATCGGTTAATTCATTTACAAAGGTTTTAACGGCCTCAGATACAAGCGCCCATGGTG 421
| |||| |||||||| ||||| ||||||||||||||||||||||||||||| |||||||
Sbjct 359 GACCATTAGTTAATTCCTTTACGAAGGTTTTAACGGCCTCAGATACAAGCGCTCATGGTG 418
Query 422 GATTCTCTGTTCCGAGAAAACATGCTATTGAATGTCTCCCTCCTCTGAATATGTCTGAGC 481
|||||| ||| |||| ||||||||| ||||||||||||||| | ||| |||||||| | |
Sbjct 419 GATTCTTTGTACCGAAAAAACATGCCATTGAATGTCTCCCTTCGCTGGATATGTCTCAAC 478
Query 482 CTCTACCGGCACAAGAACTTCTTACTACAGATCTCCAAGGGAATCAATGGAGATTCAAAC 541
|| |||| ||||||||||||||| ||| ||||||||| || ||||||||||||||||| |
Sbjct 479 CTTTACCTGCACAAGAACTTCTTGCTATAGATCTCCATGGTAATCAATGGAGATTCAACC 538
Query 542 ACAGCTACAGAGGTACACCGCCAAGACATTTGATAACAACAGGTTGGAACGCATTCACAA 601
||| ||| ||||||||||||| |||||||||| ||||||| |||||||| ||||||||||
Sbjct 539 ACAACTATAGAGGTACACCGCAAAGACATTTGTTAACAACTGGTTGGAATGCATTCACAA 598
Query 602 CATCaaaaaaaTTGGTTGCAGGGGATGTTATTGTATTCCTTAGGGGAGAGTGTGGAGAGT 661
|||||||||||||||||||||||||||| || |||||| ||||||||||| ||||||||
Sbjct 599 CATCAAAAAAATTGGTTGCAGGGGATGTCATCGTATTCGTTAGGGGAGAGACTGGAGAGT 658
Query 662 TACGAGTTGGTATCAGACGGGCAGGGCATCAACAAGGGAACAGACCTTCATCACTAATAT 721
||||||||||||||||||| ||| | |||||||||||||| | |||||||||| || |||
Sbjct 659 TACGAGTTGGTATCAGACGAGCAAGACATCAACAAGGGAATATACCTTCATCAATAGTAT 718
Query 722 CAATAGATAGTATGGGACATGGAGTAATTGCTTCTGCAGTGCATGCTTTTGATAACCAAT 781
|||||||| ||||| ||||||| ||| ||||||| ||| ||||||||||||||||||||
Sbjct 719 CAATAGATTGTATGAGACATGGGGTAGTTGCTTCCGCAAAGCATGCTTTTGATAACCAAT 778
Query 782 GTATGTTTATTGTGGTTTGTAAGCCAAGTATCAGGTCAAGTCAATTTATTGTCAGTTACG 841
||||||| | |||||||| |||||||| | |||||| ||||||||||||||||||
Sbjct 779 GTATGTTCACTGTGGTTTACAAGCCAAG-----G-TCAAGTAAATTTATTGTCAGTTACG 832
Query 842 ACAAATTCTTAGACGCAGTGAACAAGAAGTTCAATGTCGGTTCAAGATTTACAATGCGAT 901
|||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||| |
Sbjct 833 ACAAATTCTTGGACGCTGTGAACAATAAGTTCAATGTCGGTTCAAGATTTACAATGCGGT 892
Query 902 TTGAAGGTGATGATTTATCTGAAAGAAGATATTCTGGAACAATTATTGGAGTTAAAGATT 961
| || ||||||||||| ||||||||||||| || ||| |||||||||||||||| ||||
Sbjct 893 TAGAGGGTGATGATTTCTCTGAAAGAAGATGTTTTGGGACAATTATTGGAGTTAGTGATT 952
Query 962 TCTCCCCTCATTGGA--TCGAATCAGAATGGCGAAGCTTAGAAGT 1004
|||| |||||||||| | | ||||| ||||| |||||||||||
Sbjct 953 TCTCTCCTCATTGGAAAT-GT-TCAGAGTGGCGCAGCTTAGAAGT 995
Score = 719 bits (389), Expect = 0.0
Identities = 687/823 (83%), Gaps = 51/823 (6%)
Strand=Plus/Plus
Query 1041 AGTGAAGTGGGATGAATTTGCATCATTTCCAAGACCTGATAAAGTTTC-CCCATGGGAAA 1099
|||| |||||||||||||| |||||||||| ||||| | ||||| || ||| ||||| |
Sbjct 993 AGTGCAGTGGGATGAATTTACATCATTTCCGGGACCTAAAAAAGTGTCACCC-TGGGACA 1051
Query 1100 TCGAACATTTAACT-CCT-TTGTCAAATGTTCTC-CGGTCATCTTTGCTCAAGAACAAGC 1156
|||||||||||| | ||| | |||||||| | || |||| |||||||||||||||||
Sbjct 1052 TCGAACATTTAA-TGCCTGCAAT-AAATGTTC-CGCGATCATTTTTGCTCAAGAACAAGC 1108
Query 1157 GTTCCCGAGAAGTTAATGAAATCGGTTCAACATCATCACATCTCTTGCCTCCTATATCGA 1216
||| ||||||||||||||||||||||| |||||||||||||||| |||||||||| ||
Sbjct 1109 GTTTACGAGAAGTTAATGAAATCGGTTCTTCATCATCACATCTCTTACCTCCTATATTGA 1168
Query 1217 CACAA-GATCAAGAAATTGGACAACCAAGCATGAT--CTATCCGATGAAT-GTTCTTCCT 1272
||||| || ||||||| || ||||| ||| || | || |||||||||| ||| || |
Sbjct 1169 CACAAGGA-CAAGAAAATGAACAACTAAG--TGTTGCCTCTCCGATGAATATTTC-TCTT 1224
Query 1273 AGTTATCGTGATGCAACAGAAGATGCTGA-GATTCCTTCTAGGTTGCTAATTAGCTACCC 1331
|||||||||||||||| ||||||||| | || |||||||| |||||||| ||||||||
Sbjct 1225 CGTTATCGTGATGCAACTGAAGATGCT-ATGAATCCTTCTAAATTGCTAATGAGCTACCC 1283
Query 1332 TGTCCCAA-CAATGCCCAAACTAACTTACAATAACAATCAAATGGTTACACCACTAGaaa 1390
||| |||| ||||||||||||||| |||||||||| |||||||||||| | | |||
Sbjct 1284 TGT-CCAACCAATGCCCAAACTAAATTACAATAAC---CAAATGGTTACAGAAATGGAAG 1339
Query 1391 aaaaTATAACAACCAATGCCA-GCGCCAGTTGTAGACTGTTTGGAGTCTCTCTTGCCACT 1449
|||||||||||||||| | || || | | || ||| |||||||||||| |||| | ||||
Sbjct 1340 AAAATATAACAACCAA-GACAGGCACTAATTTTAGGCTGTTTGGAGTCACTCTGGACACT 1398
Query 1450 CCTTCAGAGATCAAAGATCCCATTGACCAACAAGACTCATATCAGATATCTGAGATTTCT 1509
||| | | ||||||||||||||||| |||| | || | || ||||||||
Sbjct 1399 CCTCCGGTGATCAAAGATCCCATTG------AAGA---A-AT-TG-GCTCGGAGATTTCG 1446
Query 1510 AAACTCT-CTCAA-GAGAAAAAGTTTGGTCTTGGTCAAACTTTAACATCTGCAAGAGAGA 1567
||||| | || || || |||||||||||||| | |||||||||| ||| ||| |||||
Sbjct 1447 AAACT-TACTGAAGGA-AAAAAGTTTGGTCTAAGCCAAACTTTAAGATCACCAACAGAGA 1504
Query 1568 TCCAAAGCAAGCAGTTAAGTTCTACTAGAAGC-TGTACCAAAGTTCAAATGGAAGGTGTA 1626
|||||| ||||||||| ||||||| ||||| | |||||||||||||||||| ||||||||
Sbjct 1505 TCCAAAACAAGCAGTTCAGTTCTAGTAGAA-CTTGTACCAAAGTTCAAATGCAAGGTGTA 1563
Query 1627 ACAGTAGGAAGAGCTTTGGATTTAAGTGTTCTTAATGGATATGATCAACTAATACTAGAA 1686
||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1564 ACAATAGGAAGAGCTGTGGATTTAAGTGTTCTTAATGGATATGATCAGCTAATACTAGAA 1623
Query 1687 TTGGAGAAACTCTTTGATCTCAACGGCCAGTTGCAAACCCGCAACCAATGGGAAATAAG- 1745
|||||||| ||||||||| |||| || || |||||||| ||||||||||||||||| ||
Sbjct 1624 TTGGAGAAGCTCTTTGATATCAAAGGTCAATTGCAAACTCGCAACCAATGGGAAAT-AGC 1682
Query 1746 TTTCATAGACAATGAAGGAGATAAGATGTTTGTTGGAGATGATCCATGGCCTGAATTCTG 1805
||||| ||| | ||| | |||||||||| |||||||||| ||||||||||||||||||||
Sbjct 1683 TTTCACAGATAGTGACGAAGATAAGATGCTTGTTGGAGACGATCCATGGCCTGAATTCTG 1742
Query 1806 CAACATGGTGAAGAGGATTAT-CATATATACAAAAGAGAAGGT 1847
|||||||||||||| ||| || ||| | |||||||| ||||
Sbjct 1743 CAACATGGTGAAGAAGAT-ATTCAT-T---CAAAAGAGGAGGT 1780
Score = 196 bits (106), Expect = 5e-49
Identities = 148/168 (88%), Gaps = 3/168 (2%)
Strand=Plus/Plus
Query 1 ATGGAAAGTGGCAGTGTTGTGAATGCACAACCTGAATTATCAGGCATAACAGTTGATGAA 60
||||||||||||| |||||||||||||||||||||||||||||||||| |||||| |
Sbjct 1 ATGGAAAGTGGCAACGTTGTGAATGCACAACCTGAATTATCAGGCATAA---TTGATGGA 57
Query 61 TCTAAAAGTTATATGTACGAGCAGTTATGGAAATTGTGTGCTGGACCTTTATATGATATT 120
|| || || ||| | |||||||||||||||||| | ||||| |||||||| | |||||||
Sbjct 58 TCCAAGAGCTATGTTTACGAGCAGTTATGGAAACTCTGTGCGGGACCTTTGTGTGATATT 117
Query 121 CCAAAAGTTGGAGAAAAAGTTTACTACTTTCCTCAAGGCCACATAGAG 168
|||||| |||||||||| ||||| |||||||||||||| |||||||||
Sbjct 118 CCAAAACTTGGAGAAAAGGTTTATTACTTTCCTCAAGGTCACATAGAG 165
> AT1G34410.1 | Symbols: ARF21 | auxin response factor 21 | chr1:12577722-12580824
FORWARD LENGTH=1821
Length=1821
Score = 915 bits (495), Expect = 0.0
Identities = 676/764 (88%), Gaps = 10/764 (1%)
Strand=Plus/Plus
Query 243 tcGTGTTATTGCTATTCAGCTTAAAGTGGaaaaaaaTAGTGATGAGACTTATGCTGAGAT 302
|||||||||||| ||||| ||||| |||||||| ||||||||||||| ||||||||||||
Sbjct 240 TCGTGTTATTGCAATTCATCTTAAGGTGGAAAACAATAGTGATGAGATTTATGCTGAGAT 299
Query 303 CACTTTGATGCCATATACAACTCAAGTGGTAATCCATAATCAGAATGATAATC-ATTATA 361
||||||||||||| ||||||||||||| ||||||| || ||||| ||| |||| ||| ||
Sbjct 300 CACTTTGATGCCAGATACAACTCAAGTTGTAATCCCTACTCAGAGTGAAAATCGATT-TA 358
Query 362 GGCCATCGGTTAATTCATTTACAAAGGTTTTAACGGCCTCAGATACAAGCGCCCATGGTG 421
|||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct 359 GGCCATTAGTTAATTCCTTTACAAAGGTTTTAACGGCCTCAGATACAAGCGCTTATGGTG 418
Query 422 GATTCTCTGTTCCGAGAAAACATGCTATTGAATGTCTCCCTCCTCTGAATATGTCTGAGC 481
||||||||||||||| ||||||||| ||||||||||||||||| ||| |||||||| |||
Sbjct 419 GATTCTCTGTTCCGAAAAAACATGCCATTGAATGTCTCCCTCCGCTGGATATGTCTCAGC 478
Query 482 CTCTACCGGCACAAGAACTTCTTACTACAGATCTCCAAGGGAATCAATGGAGATTCAAAC 541
||||||||||||||||| ||||| ||| ||||||||| | |||||||||||||||| ||
Sbjct 479 CTCTACCGGCACAAGAAATTCTTGCTATAGATCTCCATGATAATCAATGGAGATTCAGAC 538
Query 542 ACAGCTACAGAGGTACACCGCCAAGACATTTGATAACAACAGGTTGGAACGCATTCACAA 601
||| ||| ||||||||||||| |||||||| | ||||||| |||||||| | ||||| ||
Sbjct 539 ACAACTATAGAGGTACACCGCAAAGACATTCGTTAACAACTGGTTGGAATGAATTCATAA 598
Query 602 CATCaaaaaaaTTGGTTGCAGGGGATGTTATTGTATTCCTTAGGGGAGAGTGTGGAGAGT 661
||||||| ||||||||| ||| ||||||||||||||| ||||||||||| ||||||||
Sbjct 599 CATCAAAGAAATTGGTTAAAGGAGATGTTATTGTATTCGTTAGGGGAGAGACTGGAGAGT 658
Query 662 TACGAGTTGGTATCAGACGGGCAGGGCATCAACAAGGGAACAGACCTTCATCACTAATAT 721
||||||||||||||||||| ||| | |||||||||||||| | |||||||||| || |||
Sbjct 659 TACGAGTTGGTATCAGACGAGCAAGACATCAACAAGGGAATATACCTTCATCAATAGTAT 718
Query 722 CAATAGATAGTATGGGACATGGAGTAATTGCTTCTGCAGTGCATGCTTTTGATAACCAAT 781
|||||||| ||||| ||||||| ||||||||||| ||| ||||||||||||||||||||
Sbjct 719 CAATAGATTGTATGAGACATGGGGTAATTGCTTCCGCAAAGCATGCTTTTGATAACCAAT 778
Query 782 GTATGTTTATTGTGGTTTGTAAGCCAAGTATCAGGTCAAGTCAATTTATTGTCAGTTACG 841
|||| || |||||||||| |||||||| | ||||||||||||||||||||||| |
Sbjct 779 GTATATTCATTGTGGTTTACAAGCCAAG-----G-TCAAGTCAATTTATTGTCAGTTATG 832
Query 842 ACAAATTCTTAGACGCAGTGAACAAGAAGTTCAATGTCGGTTCAAGATTTACAATGCGAT 901
|||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| |
Sbjct 833 ACAAATTCTTAGACGCTGTGAACAATAAGTTTAATGTCGGTTCAAGATTTACAATGCGGT 892
Query 902 TTGAAGGTGATGATTTATCTGAAAGAAGATATTCTGGAACAATTATTGGAGTTAAAGATT 961
|||| ||||||||||| |||||||||||||||| ||| |||||||||||||||| ||||
Sbjct 893 TTGAGGGTGATGATTTCTCTGAAAGAAGATATTTTGGGACAATTATTGGAGTTAGTGATT 952
Query 962 TCTCCCCTCATTGGATCGAAT-CAGAATGGCGAAGCTTAGAAGT 1004
|||| |||||||||| | | |||| ||||| |||||||||||
Sbjct 953 TCTCTCCTCATTGGAA-GTGTTCAGAGTGGCGCAGCTTAGAAGT 995
Score = 773 bits (418), Expect = 0.0
Identities = 720/859 (84%), Gaps = 47/859 (5%)
Strand=Plus/Plus
Query 1041 AGTGAAGTGGGATGAATTTGCATCATTTCCAAGACCTGATAAAGTTTC-CCCATGGGAAA 1099
|||| ||||||||||||||||||||||| | |||||| ||||||| || ||| ||||| |
Sbjct 993 AGTGCAGTGGGATGAATTTGCATCATTTTCGAGACCTAATAAAGTGTCACCC-TGGGAGA 1051
Query 1100 TCGAACATTTAACT-CCTTTGTCAAATGTTCTC-CGGTCATCTTTGCTCAAGAACAAGCG 1157
|||||||||| | | ||| || |||||||| | || |||||||||||||||||||||||
Sbjct 1052 TCGAACATTT-AGTGCCTGCGTTAAATGTTC-CGCGATCATCTTTGCTCAAGAACAAGCG 1109
Query 1158 TTCCCGAGAAGTTAATGAAATCGGTTCAACATCATCACATCTCTTGCCTCCTATATCGAC 1217
|| ||||||||||||||| ||||||| ||||||||||||||||||||||||||| |||
Sbjct 1110 TTTACGAGAAGTTAATGAATTCGGTTCTTCATCATCACATCTCTTGCCTCCTATATTGAC 1169
Query 1218 ACAA-GATCAAGAAATTGGACAACCAAGCATGATCTATCCGATGAAT-GTTCTTCCTAGT 1275
|||| || |||||||||||||||| |||| || || ||||||||| ||| || | ||
Sbjct 1170 ACAAGGA-CAAGAAATTGGACAACTAAGCGTGGCCTCCCCGATGAATATTTC-TCTTCGT 1227
Query 1276 TATCGTGATGCAACAGAAGATGCTGA-GATTCCTTCTAGGTTGCTAATTAGCTACCCTGT 1334
||||||||| |||| |||| |||| | || ||||||||| |||||||| |||||||||||
Sbjct 1228 TATCGTGATACAACTGAAGCTGCT-ATGAATCCTTCTAGATTGCTAATGAGCTACCCTGT 1286
Query 1335 CCCAA-CAATGCCCAAACTAACTTACAATAACAATCAAATGGTTACACCACTAGaaaaaa 1393
|||| ||||||||||||||| |||||||||| ||||||||||||| | ||||| |||
Sbjct 1287 -CCAACCAATGCCCAAACTAAATTACAATAAC---CAAATGGTTACACAAATAGAAGAAA 1342
Query 1394 aTATAACAACCAATGCCA-GCGCCAGTTGTAGACTGTTTGGAGTCTCTCTTGCCACTCCT 1452
||||||||||||| | || || | | || ||| |||||||||||| |||| | ||||||
Sbjct 1343 ATATAACAACCAA-GGCAGGCACTAATTTTAGGCTGTTTGGAGTCACTCTGGACACTCC- 1400
Query 1453 TCAGA-GATCAAAGATCCCATTGACCAACAAGACTCATATCAGATATCTGAGATTTCTAA 1511
|| || |||||||||||||||| | ||| | | || | | || || ||||| ||
Sbjct 1401 TCCGATGATCAAAGATCCCATT-A--AAC-A-A---AT-T--G-GCTCGGATATTTCGAA 1448
Query 1512 ACTCT-CT-CAAGAGAAAAAGTTTGGTCTTGGTCAAACTTTAACATCTGCAAGAGAGATC 1569
||| | || |||| ||||||||||||| | |||||||| | ||| ||| |||||||
Sbjct 1449 ACT-TACTGAAAGA-AAAAAGTTTGGTCAAAGCCAAACTTTGAGATCACCAATAGAGATC 1506
Query 1570 CAAAGCAAGCAGTTAAGTTCTACTAGAAGC-TGTACCAAAGTTCAAATGGAAGGTGTAAC 1628
|||||||||||||| |||||| |||| | | |||||||||||||||||| ||||||||||
Sbjct 1507 CAAAGCAAGCAGTTCAGTTCTTCTAGGA-CTTGTACCAAAGTTCAAATGCAAGGTGTAAC 1565
Query 1629 AGTAGGAAGAGCTTTGGATTTAAGTGTTCTTAATGGATATGATCAACTAATACTAGAATT 1688
| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1566 AATAGGAAGAGCTGTGGATTTAAGTGTTCTTAATGGATATGATCAGCTAATACTAGAATT 1625
Query 1689 GGAGAAACTCTTTGATCTCAACGGCCAGTTGCAAACCCGCAACCAATGGGAAATAAG-TT 1747
|||||| ||||||||| |||| ||||| || ||||| |||||||||||| ||||| | ||
Sbjct 1626 GGAGAAGCTCTTTGATATCAAAGGCCAATTACAAACTCGCAACCAATGGAAAATA-GCTT 1684
Query 1748 TCATAGACAATGAAGGAG-ATAAGATGTTTGTTGGAGATGATCCATGGCCTGAATTCTGC 1806
||| ||| | ||| || | || ||||| |||||||||| |||||||||||||||||||||
Sbjct 1685 TCACAGATAGTGACGG-GTATGAGATGCTTGTTGGAGACGATCCATGGCCTGAATTCTGC 1743
Query 1807 AACATGGTGAAGAGGATTATC-ATATATACAAAAGAGAAGGTCAAAAACTTAAAGTCC-G 1864
|| |||||||||| ||| || |||||| |||||||| ||||||||||| | |||||| |
Sbjct 1744 AAAATGGTGAAGAAGAT-ATTGATATATTCAAAAGAGGAGGTCAAAAACCTGAAGTCCAG 1802
Query 1865 -AACAATCTCTCAAATTGA 1882
|| | |||||||| ||||
Sbjct 1803 TAAGAGTCTCTCAAGTTGA 1821
> AT1G35240.1 | Symbols: ARF20 | auxin response factor 20 | chr1:12927457-12930523
REVERSE LENGTH=1773
Length=1773
Score = 896 bits (485), Expect = 0.0
Identities = 674/764 (88%), Gaps = 18/764 (2%)
Strand=Plus/Plus
Query 244 CGTGTTATTGCTATTCAGCTTAAAGTGGaaaaaaaTAGTGATGAGACTTATGCTGAGATC 303
||||||||||| ||||| ||||| |||||||| |||||||||||||||||||||||||||
Sbjct 241 CGTGTTATTGCAATTCATCTTAAGGTGGAAAACAATAGTGATGAGACTTATGCTGAGATC 300
Query 304 ACTTTGATGCCATATACAACTCAAGTGGTAATCCATAATCAGAATGATAATC-ATTATAG 362
|||||||||||| ||||||||||||| ||||||| || ||||| ||| |||| ||| |||
Sbjct 301 ACTTTGATGCCAGATACAACTCAAGTTGTAATCCCTACTCAGAGTGAAAATCAATT-TAG 359
Query 363 GCCATCGGTTAATTCATTTACAAAGGTTTTAACGGCCTCAGATACAAGCGCCCATGGTGG 422
||||| |||||||| ||||| ||||||||||||||||| ||||||||||| |||||||
Sbjct 360 GCCATTAGTTAATTCCTTTACGAAGGTTTTAACGGCCTCTGATACAAGCGCTTATGGTGG 419
Query 423 ATTCTCTGTTCCGAGAAAACATGCTATTGAATGTCTCCCTCCTCTGAATATGTCTGAGCC 482
||||| |||||||| ||||||||| ||||||||||||||| | | | || |||
Sbjct 420 ATTCTTTGTTCCGAAAAAACATGCCATTGAATGTCTCCCT-C-C-----A---CT--GCC 467
Query 483 TCTACCGGCACAAGAACTTCTTACTACAGATCTCCAAGGGAATCAATGGAGATTCAAACA 542
|||||||||||||||||||||| ||| ||||||||| || |||||||||||||||| |||
Sbjct 468 TCTACCGGCACAAGAACTTCTTGCTAAAGATCTCCATGGTAATCAATGGAGATTCAGACA 527
Query 543 CAGCTACAGAGGTACACCGCCAAGACATTTGATAACAACAGGTTGGAACGCATTCACAAC 602
|||||| ||||||||||||| |||||||| | ||||||| |||||||| | |||||||||
Sbjct 528 CAGCTATAGAGGTACACCGCAAAGACATTCGTTAACAACTGGTTGGAATGAATTCACAAC 587
Query 603 ATCaaaaaaaTTGGTTGCAGGGGATGTTATTGTATTCCTTAGGGGAGAGTGTGGAGAGTT 662
||| ||||| |||||| ||| ||||||||||||||| ||||||||||| |||||||||
Sbjct 588 ATCGAAAAAGTTGGTTAAAGGAGATGTTATTGTATTCGTTAGGGGAGAGACTGGAGAGTT 647
Query 663 ACGAGTTGGTATCAGACGGGCAGGGCATCAACAAGGGAACAGACCTTCATCACTAATATC 722
|||||||||||||||||| ||| | |||||||||||||| | |||||||||| || ||||
Sbjct 648 ACGAGTTGGTATCAGACGAGCAAGACATCAACAAGGGAATATACCTTCATCAATAGTATC 707
Query 723 AATAGATAGTATGGGACATGGAGTAATTGCTTCTGCAGTGCATGCTTTTGATAACCAATG 782
||||||| ||||| ||||||| ||||||||||| ||| ||||||| |||||||||||||
Sbjct 708 AATAGATTGTATGAGACATGGGGTAATTGCTTCCGCAAAGCATGCTCTTGATAACCAATG 767
Query 783 TATGTTTATTGTGGTTTGTAAGCCAAGTATCAGGTCAAGTCAATTTATTGTCAGTTACGA 842
||| || |||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 768 TATATTCATTGTGGTTTACAAGCCAAGTATCAGGTCAAGTCAATTTATTGTCAGTTACGA 827
Query 843 CAAATTCTTAGACGC-AGTGAACAAGAAGTTCAATGTCGGTTCAAGATTTACAATGCGAT 901
||||||||||||||| | ||||||| ||||||| |||||||||||||||||||||||| |
Sbjct 828 CAAATTCTTAGACGCTA-TGAACAATAAGTTCATTGTCGGTTCAAGATTTACAATGCGGT 886
Query 902 TTGAAGGTGATGATTTATCTGAAAGAAGATATTCTGGAACAATTATTGGAGTTAAAGATT 961
|||| ||||||||||| |||||||||||||||| ||| ||||||||||||||||| ||||
Sbjct 887 TTGAGGGTGATGATTTCTCTGAAAGAAGATATTTTGGGACAATTATTGGAGTTAATGATT 946
Query 962 TCTCCCCTCATTGGATCGAAT-CAGAATGGCGAAGCTTAGAAGT 1004
|||| |||||||||| | | |||| ||||| |||||||||||
Sbjct 947 TCTCTCCTCATTGGAA-GTGTTCAGAGTGGCGCAGCTTAGAAGT 989
Score = 582 bits (315), Expect = 3e-165
Identities = 560/672 (83%), Gaps = 41/672 (6%)
Strand=Plus/Plus
Query 1225 CAAGAAATTGGACAACCAAGCAT-GATCTATCCGATGAAT-GTTCTTCCTAGTTATCGTG 1282
|||||||||||||||| |||| | | || ||||||||| ||| || | |||||||||
Sbjct 1129 CAAGAAATTGGACAACTAAGCGTCG-CCTCCCCGATGAATACTTC-TCTTCGTTATCGTG 1186
Query 1283 ATGCAACAGAAGATGCTGA-GATTCCTTCTAGGTTGCTAATTAGCTACCCTGTCCCAA-C 1340
|| |||| ||||||||| | || ||||||||| |||||||| ||||||||||| |||| |
Sbjct 1187 ATACAACTGAAGATGCT-ATGAATCCTTCTAGATTGCTAATGAGCTACCCTGT-CCAACC 1244
Query 1341 AATGCCCAAACTAACTTACAATAACAATCAAATGGTTACACCACTAGaaaaaaaTATAAC 1400
|||||||||||||| |||||||||| ||||||||||||| | ||||| ||||||||||
Sbjct 1245 AATGCCCAAACTAAATTACAATAAC---CAAATGGTTACACAAATAGAAGAAAATATAAC 1301
Query 1401 AACCAATGCCAG-CGCCAGTTGTAGACTGTTTGGAGTCTCTCTTGCCACTCCTTC-AGAG 1458
|||||| | ||| | | | || ||| ||||||||||||||||| |||| ||| || || |
Sbjct 1302 AACCAA-GGCAGTCACTAATTTTAGGCTGTTTGGAGTCTCTCTAGCCATTCC-TCTAGTG 1359
Query 1459 ATCAAAGATCCCATTGACCAACAAGACTCATATCAGATATCTGAGATTTCTAAACTCT-C 1517
|||||||||||||||| |||| | || | || || ||||| ||||| | |
Sbjct 1360 ATCAAAGATCCCATTG------AAGA---A-AT-TG-GCTCGGATATTTCGAAACT-TAC 1406
Query 1518 TCAA-GAGAAAAAGTTTGGTCTTGGTCAAACTTTAACATCTGCAAGAGAGATCCAAAGCA 1576
| || || ||||||||||||| | |||||||| | ||| ||| ||||||||||||||
Sbjct 1407 TGAAGGA-AAAAAGTTTGGTCAAAGCCAAACTTTGAGATCACCAATAGAGATCCAAAGCA 1465
Query 1577 AGCAGTTAAGTTCTACTAGAAGC-TGTACCAAAGTTCAAATGGAAGGTGTAACAGTAGGA 1635
||||||| |||||||||||| | |||||||||||||||||| ||||||||||| |||||
Sbjct 1466 AGCAGTTTGGTTCTACTAGAA-CTTGTACCAAAGTTCAAATGCAAGGTGTAACAATAGGA 1524
Query 1636 AGAGCTTTGGATTTAAGTGTTCTTAATGGATATGATCAACTAATACTAGAATTGGAGAAA 1695
|||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1525 AGAGCTGTGGATTTAAGTGTTCTTAATGGATATGATCAGCTAATACTAGAATTGGAGAAG 1584
Query 1696 CTCTTTGATCTCAACGGCCAGTTGCAAACCCGCAACCAATGGGAAATAAG-TTTCATAGA 1754
|||||||||||||| ||||| | ||||| |||||||||||| ||||| | ||||| |||
Sbjct 1585 CTCTTTGATCTCAAAGGCCAACTACAAACTCGCAACCAATGGAAAATA-GCTTTCACAGA 1643
Query 1755 CAATGAAGGAG-ATAAGATGTTTGTTGGAGATGATCCATGGCCTGAATTCTGCAACATGG 1813
| ||| || | || ||||| |||||||||| ||||||||||||||||||||||| ||||
Sbjct 1644 TAGTGACGG-GTATGAGATGCTTGTTGGAGACGATCCATGGCCTGAATTCTGCAAAATGG 1702
Query 1814 TGAAGAGGATTATC-ATATATACAAAAGAGAAGGTCAAAAACTTAAAGTCC-G-AACAAT 1870
|||||| ||| || |||||| |||||||| ||||||||||| |||||||| | || | |
Sbjct 1703 TGAAGAAGAT-ATTGATATATTCAAAAGAGGAGGTCAAAAACCTAAAGTCCAGTAAGAGT 1761
Query 1871 CTCTCAAATTGA 1882
||||||| ||||
Sbjct 1762 CTCTCAAGTTGA 1773
Score = 196 bits (106), Expect = 5e-49
Identities = 148/168 (88%), Gaps = 3/168 (2%)
Strand=Plus/Plus
Query 1 ATGGAAAGTGGCAGTGTTGTGAATGCACAACCTGAATTATCAGGCATAACAGTTGATGAA 60
||||||| ||||| |||||||||||||||||||||||||||||||||| |||||| |
Sbjct 1 ATGGAAACTGGCAACGTTGTGAATGCACAACCTGAATTATCAGGCATAA---TTGATGGA 57
Query 61 TCTAAAAGTTATATGTACGAGCAGTTATGGAAATTGTGTGCTGGACCTTTATATGATATT 120
|| || || |||||||||||||||||||||||| | ||||| |||||||| | |||||||
Sbjct 58 TCCAAGAGCTATATGTACGAGCAGTTATGGAAACTCTGTGCGGGACCTTTGTGTGATATT 117
Query 121 CCAAAAGTTGGAGAAAAAGTTTACTACTTTCCTCAAGGCCACATAGAG 168
|||||| |||||||||| ||||| ||||||||||||||| | ||||||
Sbjct 118 CCAAAACTTGGAGAAAATGTTTATTACTTTCCTCAAGGCAATATAGAG 165
> AT1G35520.1 | Symbols: ARF15 | auxin response factor 15 | chr1:13082819-13085830
REVERSE LENGTH=1797
Length=1797
Score = 856 bits (463), Expect = 0.0
Identities = 680/781 (87%), Gaps = 29/781 (4%)
Strand=Plus/Plus
Query 243 tcGTGTTATTGCTATTCAGCTTAAAGTGGaaaaaaaTAGTGATGAGACTTATGCTGAGAT 302
|||||||||||| ||||| ||||| |||||||| ||||||||||||||||||||| ||||
Sbjct 240 TCGTGTTATTGCAATTCATCTTAAGGTGGAAAACAATAGTGATGAGACTTATGCTAAGAT 299
Query 303 CACTTTGATGCCATATACAAC--------------T-CAAGTGGTAATCCATAATCAGAA 347
||||||||||||| ||||||| | ||||| ||||||| || ||||||
Sbjct 300 CACTTTGATGCCAGATACAACTGTAAGTGAAAATTTACAAGTTGTAATCCCTACTCAGAA 359
Query 348 TGATAATC-ATTATAGGCCATCGGTTAATTCATTTACAAAGGTTTTAACGGCCTCAGATA 406
||| |||| ||| |||||||| |||||||| ||||||||||||||||| ||||| ||||
Sbjct 360 TGAAAATCAATT-TAGGCCATTAGTTAATTCCTTTACAAAGGTTTTAACTGCCTCTGATA 418
Query 407 CAAGCGCCCATGGTGGATTCTCTGTTCCGAGAAAACATGCTATTGAATGTCTCCCTCCTC 466
||| || |||||| ||| |||||||||| ||||||||| |||||||||||||||||||
Sbjct 419 TAAGTGCTAATGGTGTATTTTCTGTTCCGAAAAAACATGCCATTGAATGTCTCCCTCCTC 478
Query 467 TGAATATGTCTGAGCCTCTACCGGCACAAGAACTTCTTACTACAGATCTCCAAGGGAATC 526
|| |||||||| |||||||||||||||||||||||||| ||| ||||||||| || ||||
Sbjct 479 TGGATATGTCTCAGCCTCTACCGGCACAAGAACTTCTTGCTATAGATCTCCATGGTAATC 538
Query 527 AATGGAGATTCAAACACAGCTACAGAGGTACACCGCCAAGACATTTGA-TAACAACAGGT 585
||||||| |||| ||||||||| ||||||||||||| ||||||||| | ||||||| |||
Sbjct 539 AATGGAGCTTCAGACACAGCTATAGAGGTACACCGCAAAGACATTT-ATTAACAACTGGT 597
Query 586 TGGAACGCATTCACAACATCaaaaaaaTTGGTTGCAGGGGATGTTATTGTATTCCTTAGG 645
||||| | ||| ||||||||||||||||||||| ||| ||||||||||||||| |||||
Sbjct 598 TGGAATGAATTTACAACATCAAAAAAATTGGTTAAAGGAGATGTTATTGTATTCGTTAGG 657
Query 646 GGAGAGTGTGGAGAGTTACGAGTTGGTATCAGACGGGCAGGGCATCAACAAGGGAACAGA 705
|||||| ||||||||||||||||||||||||||| ||| | |||||||||||||| | |
Sbjct 658 GGAGAGACTGGAGAGTTACGAGTTGGTATCAGACGAGCAAGACATCAACAAGGGAATATA 717
Query 706 CCTTCATCACTAATATCAATAGATAGTATGGGACATGGAGTAATTGCTTCTGCAGTGCAT 765
||||||||| || ||||||||||| ||||| ||||||| ||||||||||| ||| ||||
Sbjct 718 CCTTCATCAATAGTATCAATAGATTGTATGAGACATGGGGTAATTGCTTCCGCAAAGCAT 777
Query 766 GCTTTTGATAACCAATGTATGTTTATTGTGGTTTGTAAGCCAAGTATCAGGTCAAGTCAA 825
||||||||||||||||||||||| |||||||||| ||||| | ||||||||||||
Sbjct 778 GCTTTTGATAACCAATGTATGTTCATTGTGGTTTACAAGCC----A--AGGTCAAGTCAA 831
Query 826 TTTATTGTCAGTTACGACAAATTCTTAGACGCAGTGAACAAGAAGTTCAATGTCGGTTCA 885
|||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct 832 TTTATTGTCAGTTACGACAAATTCTTAGACGCTGTGAACAATAAGTTCAATGTCGGTTCA 891
Query 886 AGATTTACAATGCGATTTGAAGGTGATGATTTATCTGAAAGAAGATATTCTGGAACAATT 945
|||||||||||||| ||||| |||||||||||||||||||||||||||| ||| ||||||
Sbjct 892 AGATTTACAATGCGGTTTGAGGGTGATGATTTATCTGAAAGAAGATATTTTGGGACAATT 951
Query 946 ATTGGAGTTAA-AGATTTCTCCCCTCATTGGATCGAAT-CAGAATGGCGAAGCTTAGAAG 1003
|||||||||| | ||||||| |||||||||| | | |||| ||||| ||||||||||
Sbjct 952 ATTGGAGTTAGTA-ATTTCTCTCCTCATTGGAA-GTGTTCAGACTGGCGCAGCTTAGAAG 1009
Query 1004 T 1004
|
Sbjct 1010 T 1010
Score = 741 bits (401), Expect = 0.0
Identities = 687/819 (84%), Gaps = 43/819 (5%)
Strand=Plus/Plus
Query 1041 AGTGAAGTGGGATGAATTTGCATCATTTCCAAGACCTGATAAAGTTTC-CCCATGGGAAA 1099
|||| ||||||||||||||||||||||| |||||| ||||||| || ||| ||||| |
Sbjct 1008 AGTGCAGTGGGATGAATTTGCATCATTTTTGAGACCTAATAAAGTGTCACCC-TGGGAGA 1066
Query 1100 TCGAACATTTAACT-CCTTTGTCAAATGTTCTC-CGGTCATCTTTGCTCAAGAACAAGCG 1157
|||||||||||| | ||| || |||||||| | || |||||||| ||||||||||||||
Sbjct 1067 TCGAACATTTAA-TGCCTGCGTTAAATGTTC-CGCGATCATCTTTTCTCAAGAACAAGCG 1124
Query 1158 TTCCCGAGAAGTTAATGAAATCGGTTCAACATCATCACATCTCTTGCCTCCTATATCGAC 1217
|| ||||||||||||||| ||||||| ||||||||||||||||||||||||||| |||
Sbjct 1125 TTTACGAGAAGTTAATGAATTCGGTTCTTCATCATCACATCTCTTGCCTCCTATATTGAC 1184
Query 1218 ACAA-GATCAAGAAATTGGACAACCAAGCATGATCTATCCGATGAAT-GTTCTTCCTAGT 1275
|||| || |||||||||||||||| |||| || || ||||||||| ||| || | |
Sbjct 1185 ACAAGGA-CAAGAAATTGGACAACTAAGCGTGGCCTCCCCGATGAATATTTC-TCTTCTT 1242
Query 1276 TATCGTGATGCAACAGAAGATGCTGA-GATTCCTTCTAGGTTGCTAATTAGCTACCCTGT 1334
|||||||| |||||||||||||| | || ||||||||| |||||||| |||||||||||
Sbjct 1243 TATCGTGAAACAACAGAAGATGCT-ATGAATCCTTCTAGATTGCTAATGAGCTACCCTGT 1301
Query 1335 CCCAA-CAATGCCCAAACTAACTTACAATAACAATCAAATGGTTACACCACTAGaaaaaa 1393
|||| |||||||||||| || |||||||||| ||||||||||||| | ||||| |||
Sbjct 1302 -CCAACCAATGCCCAAACGAAATTACAATAAC---CAAATGGTTACACAAATAGAAGAAA 1357
Query 1394 aTATAACAACCAATGCCA-GCGCCAGTTGTAGACTGTTTGGAGTCTCTCTTGCCACTCCT 1452
||||||||||||| | || || | | || ||| |||||||||||||||| |||||||||
Sbjct 1358 ATATAACAACCAA-GGCAGGCACTAATTTTAGGTTGTTTGGAGTCTCTCTGGCCACTCCT 1416
Query 1453 TCAGAGATCAAAGATCCCATTGACCAACAAGACTCATATCAGATATCTGAGATTTCTAAA 1512
| | ||||||||||||||||| ||| | | || | | || || ||||| |||
Sbjct 1417 CCGGTGATCAAAGATCCCATTG---AAC-A-A---AT-T--G-GCTCGGATATTTCGAAA 1464
Query 1513 CTCT-CTCAA-GAGAAAAAGTTTGGTCTTGGTCAAACTTTAACATCTGCAAGAGAGATCC 1570
|| | || || || ||||||||||||| | |||||||| | ||| ||| | | ||||
Sbjct 1465 CT-TACTGAAGGA-AAAAAGTTTGGTCAAAGCCAAACTTTGAGATCACCAACAAAAATCC 1522
Query 1571 AAAGCAAGCAGTTAAGTTCTACTAGAAGC-TGTACCAAAGTTCAAATGGAAGGTGTAACA 1629
||||||||||||| ||||||||||||| | ||||| |||||||||||| |||||||||||
Sbjct 1523 AAAGCAAGCAGTTCAGTTCTACTAGAA-CTTGTACGAAAGTTCAAATGCAAGGTGTAACA 1581
Query 1630 GTAGGAAGAGCTTTGGATTTAAGTGTTCTTAATGGATATGATCAACTAATACTAGAATTG 1689
||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1582 ATAGGAAGAGCTGTGGATTTAAGTGTTCTTAATGGATATGATCAGCTAATACTAGAATTG 1641
Query 1690 GAGAAACTCTTTGATCTCAACGGCCAGTTGCAAACCCGCAACCAATGGGAAATAAGTTTC 1749
||||| ||||| |||||||| ||||| || ||||| |||||||||||| |||||| ||||
Sbjct 1642 GAGAAGCTCTTCGATCTCAAAGGCCAATTACAAACTCGCAACCAATGGAAAATAATTTTC 1701
Query 1750 ATAGACAATGAAGGA-GATAAGATGTTTGTTGGAGATGATCCATGGCCTGAATTCTGCAA 1808
| || | || | || ||| ||||| |||||||||| |||||||||||||||||||||||
Sbjct 1702 ACAGGTAGTG-ACGAGGATGAGATGCTTGTTGGAGACGATCCATGGCCTGAATTCTGCAA 1760
Query 1809 CATGGTGAAGAGGATTATCATATATACAAAAGAGAAGGT 1847
||||||||||||||| || |||| | |||||||| ||||
Sbjct 1761 CATGGTGAAGAGGAT-AT-ATAT-T-CAAAAGAGGAGGT 1795
Score = 191 bits (103), Expect = 2e-47
Identities = 148/169 (88%), Gaps = 5/169 (3%)
Strand=Plus/Plus
Query 1 ATGGAAAGTGGCAGTGTTGTGAATGCACAACCTGAATTATCAGGCATAACAGTTGAT-GA 59
||||||| ||||| |||||||||||||||||||||||||||||||||| ||||| ||
Sbjct 1 ATGGAAACTGGCAACGTTGTGAATGCACAACCTGAATTATCAGGCATAA---TTGATAGA 57
Query 60 ATCTAAAAGTTATATGTACGAGCAGTTATGGAAATTGTGTGCTGGACCTTTATATGATAT 119
|| || || |||||||||||||||||||||||| | ||||| |||||||| | ||||||
Sbjct 58 -TCCAAGAGCTATATGTACGAGCAGTTATGGAAACTCTGTGCGGGACCTTTGTGTGATAT 116
Query 120 TCCAAAAGTTGGAGAAAAAGTTTACTACTTTCCTCAAGGCCACATAGAG 168
||||||| |||||||||| ||||| ||||||||||||||| | ||||||
Sbjct 117 TCCAAAACTTGGAGAAAAGGTTTATTACTTTCCTCAAGGCAATATAGAG 165
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 93573815880
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5