BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg913561 Length=1113 Score E Sequences producing significant alignments: (Bits) Value AT5G65600.1 | Symbols: | Concanavalin A-like lectin protein ki... 797 0.0 > AT5G65600.1 | Symbols: | Concanavalin A-like lectin protein kinase family protein | chr5:26216126-26218153 REVERSE LENGTH=2028 Length=2028 Score = 797 bits (431), Expect = 0.0 Identities = 501/535 (94%), Gaps = 3/535 (1%) Strand=Plus/Plus Query 510 ACATCGAAACATGGTGCAACTCATTGGTTGGTGTAATGaaaaaaaCGAGTTCTTGCTGAT 569 |||||||||| | ||||| ||||| |||||||||||||| ||||| |||||||||||||| Sbjct 1209 ACATCGAAACCTCGTGCAGCTCATCGGTTGGTGTAATGAGAAAAATGAGTTCTTGCTGAT 1268 Query 570 ATATGAGTTAGTGCTAAATGGTAGCTTGAACTCCCACCTCTTTGGCAAAAGACCCCATTT 629 |||||||||||| | |||||||||||||||||| ||||||||||| ||||||||| |||| Sbjct 1269 ATATGAGTTAGTTCCAAATGGTAGCTTGAACTCTCACCTCTTTGGGAAAAGACCCAATTT 1328 Query 630 ACTTTCTTGGGACATAAGGTACAAGATAGCTCTTGGTTTAGCCTCTGCTCTGCTTTATCT 689 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1329 ACTTTCTTGGGACATAAGGTACAAGATAGGTCTTGGTTTAGCCTCTGCTCTGCTTTATCT 1388 Query 690 TCATGAAGAATGGGATCAATGTGTACTGCACAGAGAAATCAAAGCAAGCAATATAATGCT 749 |||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||| Sbjct 1389 TCATGAAGAATGGGATCAATGTGTACTGCACAGAGACATCAAGGCAAGTAATATAATGCT 1448 Query 750 TGACAGTGATTTCAATGTAAAGTTAGGTGATTTCGGTTTGGCTCGGGTTATGAACCATGA 809 ||||||||| |||||||||||||||||||||||||| ||||||||| | ||||||||||| Sbjct 1449 TGACAGTGAATTCAATGTAAAGTTAGGTGATTTCGGGTTGGCTCGGCTAATGAACCATGA 1508 Query 810 ACATGGTTCCCATACAACAGGATTGGCTGGAACTTTTGGGTACATGGCACATGAATATGT 869 || ||||||||||||||| || |||||||||||||||||||||||||||| ||||||||| Sbjct 1509 ACTTGGTTCCCATACAACGGGGTTGGCTGGAACTTTTGGGTACATGGCACCTGAATATGT 1568 Query 870 AACGAAAGGAAGTGCGAGTAAAGAGTCTGATATATATAGCTTTGGAATTGTTTTACTAGA 929 || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1569 AATGAAAGGAAGTGCGAGTAAAGAATCTGATATATATAGCTTTGGAATTGTTTTACTAGA 1628 Query 930 GATTGTCACAGGGAGAAAATCGCTGGAACGAACGCAAGAAGATAACAGTGATTCAGAGAG 989 |||||||||||||||||||||||||||||| || |||||||||||||||||| ||||||| Sbjct 1629 GATTGTCACAGGGAGAAAATCGCTGGAACGTACACAAGAAGATAACAGTGATACAGAGAG 1688 Query 990 T-A--ATGAGAAGAGTCTTGTGGAGAAAGTTTGGAAACTTTATGGAAAACAAGAA 1041 | | ||||||||||||| ||||||||||||||| | |||||||||||||||||| Sbjct 1689 TGATGATGAGAAGAGTCTAGTGGAGAAAGTTTGGGAGCTTTATGGAAAACAAGAA 1743 Score = 420 bits (227), Expect = 2e-116 Identities = 308/345 (89%), Gaps = 13/345 (4%) Strand=Plus/Plus Query 69 GTTCAAGCCTTTCTTACATCATCGACCTCGC-AA------ACCATCAGAAGTAATGTTCG 121 ||||||||||||||||||||||||||||||| || |||||||| || ||||||| Sbjct 689 GTTCAAGCCTTTCTTACATCATCGACCTCGCTAAGGTTCTGCCATCAGATGTTATGTTCG 748 Query 122 GGTTTATAGCTGCTGCTGGAAGAAACACAGAGGAACATAGACTTTTATCATGGGAGCTCA 181 ||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||| Sbjct 749 GGTTTATAGCTGCCGCTGGGACAAACACAGAGGAACATAGACTTTTATCATGGGAGCTCA 808 Query 182 GTTCAACTTTGGATATCGAGAAAGCCGATAGCAAGATAGGATTGGTAGTTGGCATTTCGG 241 |||||| |||||| | ||| ||||||||||||| ||||||| | ||| |||||||||||| Sbjct 809 GTTCAAGTTTGGACAGCGACAAAGCCGATAGCAGGATAGGACTAGTAATTGGCATTTCGG 868 Query 242 TTTCCGGGttt-tttttACTGATAGTTT-TGGTCCA-CACGATCGTGGTGGTTTGGTCAC 298 |||||||||| ||||| |||| |||| ||||| | ||| | ||||||||||||||||| Sbjct 869 CTTCCGGGTTTGTTTTT-CTGAC-GTTTATGGTC-ATCACAACCGTGGTGGTTTGGTCAC 925 Query 299 GGAAGCAAAGAAAAAAGAAAGACAGAGATATAGCAAACATGATATCGATAAACGAAGATC 358 ||||||||||||| |||||||| |||||||||| ||||||||||||||||||| |||| | Sbjct 926 GGAAGCAAAGAAAGAAGAAAGAAAGAGATATAGAAAACATGATATCGATAAACAAAGACC 985 Query 359 TTGAAAGGGAAGCAGGACCAAGAAAGTTTTCTTATAAAGATCTTG 403 ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 986 TTGAAAGGGAAGCAGGACCAAGAAAGTTTTCTTATAAGGATCTTG 1030 Score = 174 bits (94), Expect = 1e-42 Identities = 102/106 (96%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 404 AGCTAGGTGAAGGAGGATTTGGAGCGGTTTATGAAGGAAATTTGAAAGAAATCAATACAA 463 ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct 1064 AGCTAGGTGAAGGAGGATTTGGAGCAGTTTATGAAGGAAACTTGAAAGAAATCAATACAA 1123 Query 464 TGGTTGCGGTGAAGAAATTATCCGGTGATTCAAGGCAGCGAAAGAA 509 ||||||||||||||||| |||||||||||||||||||| ||||||| Sbjct 1124 TGGTTGCGGTGAAGAAACTATCCGGTGATTCAAGGCAGGGAAAGAA 1169 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 54567992415 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5