BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg913687 Length=546 Score E Sequences producing significant alignments: (Bits) Value AT1G45248.5 | Symbols: | Nucleolar histone methyltransferase-r... 375 2e-103 > AT1G45248.5 | Symbols: | Nucleolar histone methyltransferase-related protein | chr1:17162963-17164779 REVERSE LENGTH=797 Length=797 Score = 375 bits (203), Expect = 2e-103 Identities = 242/261 (93%), Gaps = 1/261 (0%) Strand=Plus/Plus Query 7 CCCAAAGGAAGAAAAAAGATTGGATTGAGGCGTCAGGATGCAGCACGAGACCGCATGAAA 66 ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| Sbjct 146 CCCAAAGGAAGAAAAAATATTGGATTGAGGCGTGAGGATGCAGCACGAGACCGCATGAAA 205 Query 67 GAGTTTGGATTTGATAAGCGTGTTATCAATGAGAGTATCAAGCAAGTGCTAAAGGTGTAT 126 |||||||| ||| | |||| ||||||||||| |||||||||||||||||||||||||||| Sbjct 206 GAGTTTGGGTTTAAGAAGCCTGTTATCAATGCGAGTATCAAGCAAGTGCTAAAGGTGTAT 265 Query 127 GGTGAGGACCAATGGTTTCTGATTGAAGATGCTAACTATGATGCCCTCCTTAATATTTGC 186 ||||||||||||||||||||||||||||||||||||||||| | | |||||||||||| | Sbjct 266 GGTGAGGACCAATGGTTTCTGATTGAAGATGCTAACTATGAGGTC-TCCTTAATATTTCC 324 Query 187 CTTGAAAAGAAAGAGGAACAAGACAACCAATTGGCGGCCGAGGAACACAAAGAAACAGCT 246 ||| ||||| |||||||||||| | ||| ||||||||||||||||||| ||||||||||| Sbjct 325 CTTAAAAAGCAAGAGGAACAAGCCTACCGATTGGCGGCCGAGGAACACGAAGAAACAGCT 384 Query 247 CAGgaagaagaagaagaagaa 267 ||||||||| |||||||||| Sbjct 385 CAGGAAGAACCAGAAGAAGAA 405 Score = 320 bits (173), Expect = 8e-87 Identities = 222/244 (91%), Gaps = 9/244 (4%) Strand=Plus/Plus Query 306 AGTCATGGACTCATCACCACCAGCTTTTCAATTCGTAGAAG---CACCAGTAGATTTTGC 362 ||||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||| Sbjct 407 AGTCATGGACTCATCACCATCAGCTTTTCAATTCGTAGAAGCACCACCAGTAGATTATGC 466 Query 363 ACACCAGTCTGTTGGAGGTGCCCACAGTTCTCACTGTGGATGGCTAAGCAGTGAAGAGGA 422 |||||| |||||||||||||| || ||||||||||||||||||||||||||||| ||||| Sbjct 467 ACACCATTCTGTTGGAGGTGCGCAGAGTTCTCACTGTGGATGGCTAAGCAGTGAGGAGGA 526 Query 423 GACAGATCCGGATGAGGATGAGGATAGTGATGAGATGATTGAGCTAACTCCAGAACCTCT 482 ||||||||| | ||| |||||||||||||||||||| ||||||||||||||||||| Sbjct 527 GACAGATCC-----A-GATAAGGATAGTGATGAGATGATTCAGCTAACTCCAGAACCTCT 580 Query 483 CTGTGAAGAACTTGAAGAGCTTCTTAGGGAAGTATATGGACAAAAGAAGATGAAGTACAA 542 ||||||||||||||||||| |||| || |||||||||||||| |||||| |||||||||| Sbjct 581 CTGTGAAGAACTTGAAGAGATTCTCAGAGAAGTATATGGACAGAAGAAGTTGAAGTACAA 640 Query 543 CTAA 546 |||| Sbjct 641 CTAA 644 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 26171990587 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5